RNA–Protein interactions for RNA: ENST00000553508.5

PCNX1-205, Transcript of pecanex 1, humanhuman

TSL 3

Gene PCNX1, Length 645 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCNX1-205ENST00000553508 FGFR1OPO95684 399 aaKnown RBP3.85□□□□□ -1.79
PCNX1-205ENST00000553508 GNA14O95837 355 aa3.85□□□□□ -1.79
PCNX1-205ENST00000553508 F10P00742 488 aa3.85□□□□□ -1.79
PCNX1-205ENST00000553508 IGLV3-27P01718 113 aa3.85□□□□□ -1.79
PCNX1-205ENST00000553508 RNH1P13489 461 aaKnown RBP3.85□□□□□ -1.79
PCNX1-205ENST00000553508 MAPK3P27361 379 aaPredicted RBP3.85□□□□□ -1.79
PCNX1-205ENST00000553508 CCR1P32246 355 aa3.85□□□□□ -1.79
PCNX1-205ENST00000553508 PTGFRP43088 359 aa3.85□□□□□ -1.79
PCNX1-205ENST00000553508 CSNK1DP48730 415 aa3.85□□□□□ -1.79
PCNX1-205ENST00000553508 ACADVLP49748 655 aa3.85□□□□□ -1.79
PCNX1-205ENST00000553508 RPS24P62847 133 aaKnown RBP3.85□□□□□ -1.79
PCNX1-205ENST00000553508 C9orf64Q5T6V5 341 aa3.85□□□□□ -1.79
PCNX1-205ENST00000553508 TMEM215Q68D42 235 aa3.85□□□□□ -1.79
PCNX1-205ENST00000553508 TRIM69Q86WT6 500 aa3.85□□□□□ -1.79
PCNX1-205ENST00000553508 EID2Q8N6I1 236 aa3.85□□□□□ -1.79
PCNX1-205ENST00000553508 FGF11Q92914 225 aa3.85□□□□□ -1.79
PCNX1-205ENST00000553508 PGLYRP4Q96LB8 373 aa3.85□□□□□ -1.79
PCNX1-205ENST00000553508 GSDMCQ9BYG8 508 aa3.85□□□□□ -1.79
PCNX1-205ENST00000553508 NEUROG2Q9H2A3 272 aa3.85□□□□□ -1.79
PCNX1-205ENST00000553508 POPDC2Q9HBU9 364 aa3.85□□□□□ -1.79
PCNX1-205ENST00000553508 B3GNT2Q9NY97 397 aa3.85□□□□□ -1.79
PCNX1-205ENST00000553508 TREM2Q9NZC2 230 aa3.85□□□□□ -1.79
PCNX1-205ENST00000553508 ERVW-1Q9UQF0 538 aa3.85□□□□□ -1.79
PCNX1-205ENST00000553508 ZFHX4Q86UP3 3567 aa3.85□□□□□ -1.79
PCNX1-205ENST00000553508 NUMA1Q14980 2115 aa3.85□□□□□ -1.79
PCNX1-205ENST00000553508 MUC22E2RYF6 1773 aaPredicted RBP3.84□□□□□ -1.79
PCNX1-205ENST00000553508 PTPRBP23467 1997 aa3.84□□□□□ -1.79
PCNX1-205ENST00000553508 TEX15Q9BXT5 2789 aa3.84□□□□□ -1.79
PCNX1-205ENST00000553508 GFYI3L273 518 aa3.84□□□□□ -1.79
PCNX1-205ENST00000553508 CLDN11O75508 207 aa3.84□□□□□ -1.79
PCNX1-205ENST00000553508 WISP3O95389 354 aaPredicted RBP3.84□□□□□ -1.79
PCNX1-205ENST00000553508 GP1BAP07359 652 aa3.84□□□□□ -1.79
PCNX1-205ENST00000553508 FUT1P19526 365 aa3.84□□□□□ -1.79
PCNX1-205ENST00000553508 DPP4P27487 766 aa3.84□□□□□ -1.79
PCNX1-205ENST00000553508 PLK1P53350 603 aa3.84□□□□□ -1.79
PCNX1-205ENST00000553508 SUCLG1P53597 346 aaKnown RBP3.84□□□□□ -1.79
PCNX1-205ENST00000553508 MTTPP55157 894 aa3.84□□□□□ -1.79
PCNX1-205ENST00000553508 PMF1Q6P1K2 205 aa3.84□□□□□ -1.79
PCNX1-205ENST00000553508 FAHD2BQ6P2I3 314 aaPredicted RBP3.84□□□□□ -1.79
PCNX1-205ENST00000553508 LRRC31Q6UY01 552 aa3.84□□□□□ -1.79
PCNX1-205ENST00000553508 TAC4Q86UU9 113 aa3.84□□□□□ -1.79
PCNX1-205ENST00000553508 H1FOOQ8IZA3 346 aaPredicted RBP3.84□□□□□ -1.79
PCNX1-205ENST00000553508 STK40Q8N2I9 435 aa3.84□□□□□ -1.79
PCNX1-205ENST00000553508 ZNF561Q8N587 486 aa3.84□□□□□ -1.79
PCNX1-205ENST00000553508 OR4C6Q8NH72 309 aa3.84□□□□□ -1.79
PCNX1-205ENST00000553508 AENQ8WTP8 325 aaKnown RBP3.84□□□□□ -1.79
PCNX1-205ENST00000553508 NDRG1Q92597 394 aaKnown RBP3.84□□□□□ -1.79
PCNX1-205ENST00000553508 FAHD2AQ96GK7 314 aa3.84□□□□□ -1.79
PCNX1-205ENST00000553508 ZNF578Q96N58 590 aaPredicted RBP3.84□□□□□ -1.79
PCNX1-205ENST00000553508 RPRD1AQ96P16 312 aaPredicted RBP3.84□□□□□ -1.79
PCNX1-205ENST00000553508 RASL11BQ9BPW5 248 aa3.84□□□□□ -1.79
PCNX1-205ENST00000553508 SPXQ9BT56 116 aa3.84□□□□□ -1.79
PCNX1-205ENST00000553508 DDIT4Q9NX09 232 aa3.84□□□□□ -1.79
PCNX1-205ENST00000553508 ASPMQ8IZT6 3477 aa3.83□□□□□ -1.8
PCNX1-205ENST00000553508 USP9YO00507 2555 aaPredicted RBP3.83□□□□□ -1.8
PCNX1-205ENST00000553508 UNC79Q9P2D8 2635 aa3.83□□□□□ -1.8
PCNX1-205ENST00000553508 GOLGA6L7A0A1B0GV03 622 aa3.83□□□□□ -1.8
PCNX1-205ENST00000553508 HELTA6NFD8 242 aa3.83□□□□□ -1.8
PCNX1-205ENST00000553508 KPNA3O00505 521 aaPredicted RBP3.83□□□□□ -1.8
PCNX1-205ENST00000553508 OR10H3O60404 316 aa3.83□□□□□ -1.8
PCNX1-205ENST00000553508 SEC22BO75396 215 aa3.83□□□□□ -1.8
PCNX1-205ENST00000553508 LALBAP00709 142 aa3.83□□□□□ -1.8
PCNX1-205ENST00000553508 HNRNPA2B1P22626 353 aaKnown RBP3.83□□□□□ -1.8
PCNX1-205ENST00000553508 HERVK_113P61574 105 aa3.83□□□□□ -1.8
PCNX1-205ENST00000553508 IL1RL1Q01638 556 aa3.83□□□□□ -1.8
PCNX1-205ENST00000553508 CHRNB3Q05901 458 aa3.83□□□□□ -1.8
PCNX1-205ENST00000553508 DNAJC3Q13217 504 aa3.83□□□□□ -1.8
PCNX1-205ENST00000553508 PNOCQ13519 176 aa3.83□□□□□ -1.8
PCNX1-205ENST00000553508 CEBPEQ15744 281 aa3.83□□□□□ -1.8
PCNX1-205ENST00000553508 TOR1AIP1Q5JTV8 583 aa3.83□□□□□ -1.8
PCNX1-205ENST00000553508 BRMS1LQ5PSV4 323 aa3.83□□□□□ -1.8
PCNX1-205ENST00000553508 KDM7AQ6ZMT4 941 aa3.83□□□□□ -1.8
PCNX1-205ENST00000553508 OR5AU1Q8NGC0 362 aa3.83□□□□□ -1.8
PCNX1-205ENST00000553508 OR52B4Q8NGK2 314 aa3.83□□□□□ -1.8
PCNX1-205ENST00000553508 KIR2DL5BQ8NHK3 375 aa3.83□□□□□ -1.8
PCNX1-205ENST00000553508 WFDC5Q8TCV5 224 aa3.83□□□□□ -1.8
PCNX1-205ENST00000553508 NAT6Q93015 286 aa3.83□□□□□ -1.8
PCNX1-205ENST00000553508 RNF185Q96GF1 192 aa3.83□□□□□ -1.8
PCNX1-205ENST00000553508 MYCBPQ99417 103 aaPredicted RBP3.83□□□□□ -1.8
PCNX1-205ENST00000553508 GAL3ST1Q99999 423 aa3.83□□□□□ -1.8
PCNX1-205ENST00000553508 KLHDC3Q9BQ90 382 aa3.83□□□□□ -1.8
PCNX1-205ENST00000553508 CALN1Q9BXU9 219 aa3.83□□□□□ -1.8
PCNX1-205ENST00000553508 SLC17A9Q9BYT1 436 aa3.83□□□□□ -1.8
PCNX1-205ENST00000553508 C1orf21Q9H246 121 aa3.83□□□□□ -1.8
PCNX1-205ENST00000553508 PRORYQ9H606 182 aa3.83□□□□□ -1.8
PCNX1-205ENST00000553508 WARS2Q9UGM6 360 aaKnown RBP3.83□□□□□ -1.8
PCNX1-205ENST00000553508 STAP1Q9ULZ2 295 aa3.83□□□□□ -1.8
PCNX1-205ENST00000553508 HS3ST2Q9Y278 367 aa3.83□□□□□ -1.8
PCNX1-205ENST00000553508 SPACA6W5XKT8 324 aa3.83□□□□□ -1.8
PCNX1-205ENST00000553508 AHCTF1Q8WYP5 2266 aa3.83□□□□□ -1.8
PCNX1-205ENST00000553508 USP9XQ93008 2570 aaPredicted RBP3.82□□□□□ -1.8
PCNX1-205ENST00000553508 SPTBN1Q01082 2364 aaKnown RBP3.82□□□□□ -1.8
PCNX1-205ENST00000553508 PLXNB3Q9ULL4 1909 aa3.82□□□□□ -1.8
PCNX1-205ENST00000553508 PLXNA2O75051 1894 aa3.82□□□□□ -1.8
PCNX1-205ENST00000553508 TMEM131Q92545 1883 aa3.82□□□□□ -1.8
PCNX1-205ENST00000553508 SYNJ2BP-COX16A0A087WUM0 186 aa3.82□□□□□ -1.8
PCNX1-205ENST00000553508 A0A0U1RQV5 110 aa3.82□□□□□ -1.8
PCNX1-205ENST00000553508 CXorf51AA0A1B0GTR3 108 aa3.82□□□□□ -1.8
PCNX1-205ENST00000553508 KRT87PA6NCN2 255 aa3.82□□□□□ -1.8
PCNX1-205ENST00000553508 J3QKU1 62 aa3.82□□□□□ -1.8
Retrieved 100 of 20,778 RNA–protein pairs in 67.9 ms