RNA–Protein interactions for RNA: ENST00000553405.1

MTHFD1-204, Transcript of methylenetetrahydrofolate dehydrogenase, cyclohydrolase and formyltetrahydrofolate synthetase 1, humanhuman

TSL 2

Gene MTHFD1, Length 833 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MTHFD1-204ENST00000553405 FOXN4Q96NZ1 517 aa12.95□□□□□ -0.34
MTHFD1-204ENST00000553405 SH3GL3Q99963 347 aa12.95□□□□□ -0.34
MTHFD1-204ENST00000553405 OBP2BQ9NPH6 170 aa12.95□□□□□ -0.34
MTHFD1-204ENST00000553405 ZNF226Q9NYT6 803 aa12.95□□□□□ -0.34
MTHFD1-204ENST00000553405 AMDHD2Q9Y303 409 aa12.95□□□□□ -0.34
MTHFD1-204ENST00000553405 APCP25054 2843 aa12.95□□□□□ -0.34
MTHFD1-204ENST00000553405 ABCA12Q86UK0 2595 aa12.95□□□□□ -0.34
MTHFD1-204ENST00000553405 CCDC182A6NF36 153 aa12.94□□□□□ -0.34
MTHFD1-204ENST00000553405 FAM171A2A8MVW0 826 aa12.94□□□□□ -0.34
MTHFD1-204ENST00000553405 IGKV3-15P01624 115 aa12.94□□□□□ -0.34
MTHFD1-204ENST00000553405 IGLV1-44P01699 117 aa12.94□□□□□ -0.34
MTHFD1-204ENST00000553405 PATE4P0C8F1 98 aa12.94□□□□□ -0.34
MTHFD1-204ENST00000553405 OR8G3PP0DMU2 310 aa12.94□□□□□ -0.34
MTHFD1-204ENST00000553405 NPR2P20594 1047 aa12.94□□□□□ -0.34
MTHFD1-204ENST00000553405 PPA1Q15181 289 aa12.94□□□□□ -0.34
MTHFD1-204ENST00000553405 PCK2Q16822 640 aa12.94□□□□□ -0.34
MTHFD1-204ENST00000553405 PLBD1Q6P4A8 553 aa12.94□□□□□ -0.34
MTHFD1-204ENST00000553405 BCDIN3DQ7Z5W3 292 aaKnown RBP12.94□□□□□ -0.34
MTHFD1-204ENST00000553405 MYPOPQ86VE0 399 aaPredicted RBP12.94□□□□□ -0.34
MTHFD1-204ENST00000553405 FAM169BQ8N8A8 192 aa12.94□□□□□ -0.34
MTHFD1-204ENST00000553405 TCEANCQ8N8B7 351 aa12.94□□□□□ -0.34
MTHFD1-204ENST00000553405 OR51L1Q8NGJ5 315 aa12.94□□□□□ -0.34
MTHFD1-204ENST00000553405 OR2T4Q8NH00 348 aa12.94□□□□□ -0.34
MTHFD1-204ENST00000553405 TMEM163Q8TC26 289 aa12.94□□□□□ -0.34
MTHFD1-204ENST00000553405 C11orf40Q8WZ69 217 aa12.94□□□□□ -0.34
MTHFD1-204ENST00000553405 SLC38A2Q96QD8 506 aa12.94□□□□□ -0.34
MTHFD1-204ENST00000553405 MED18Q9BUE0 208 aa12.94□□□□□ -0.34
MTHFD1-204ENST00000553405 ZNF416Q9BWM5 594 aa12.94□□□□□ -0.34
MTHFD1-204ENST00000553405 MARCH7Q9H992 704 aa12.94□□□□□ -0.34
MTHFD1-204ENST00000553405 EMC7Q9NPA0 242 aa12.94□□□□□ -0.34
MTHFD1-204ENST00000553405 KCNN3Q9UGI6 736 aa12.94□□□□□ -0.34
MTHFD1-204ENST00000553405 NDRG3Q9UGV2 375 aa12.94□□□□□ -0.34
MTHFD1-204ENST00000553405 ORC6Q9Y5N6 252 aa12.94□□□□□ -0.34
MTHFD1-204ENST00000553405 ITPR2Q14571 2701 aa12.94□□□□□ -0.34
MTHFD1-204ENST00000553405 RTTNQ86VV8 2226 aa12.93□□□□□ -0.34
MTHFD1-204ENST00000553405 ROS1P08922 2347 aa12.93□□□□□ -0.34
MTHFD1-204ENST00000553405 LOC100130705A0A1B0GUX0 176 aa12.93□□□□□ -0.34
MTHFD1-204ENST00000553405 A0A1W2PPL8 197 aa12.93□□□□□ -0.34
MTHFD1-204ENST00000553405 H0YJX3 145 aa12.93□□□□□ -0.34
MTHFD1-204ENST00000553405 HRGP04196 525 aa12.93□□□□□ -0.34
MTHFD1-204ENST00000553405 CST2P09228 141 aa12.93□□□□□ -0.34
MTHFD1-204ENST00000553405 MSR1P21757 451 aa12.93□□□□□ -0.34
MTHFD1-204ENST00000553405 PTDSS1P48651 473 aaKnown RBP12.93□□□□□ -0.34
MTHFD1-204ENST00000553405 HIST1H3AP68431 136 aa12.93□□□□□ -0.34
MTHFD1-204ENST00000553405 HSF2Q03933 536 aa12.93□□□□□ -0.34
MTHFD1-204ENST00000553405 KEAP1Q14145 624 aa12.93□□□□□ -0.34
MTHFD1-204ENST00000553405 SLC25A30Q5SVS4 291 aa12.93□□□□□ -0.34
MTHFD1-204ENST00000553405 HIST2H3PS2Q5TEC6 136 aa12.93□□□□□ -0.34
MTHFD1-204ENST00000553405 FBXW10Q5XX13 1052 aa12.93□□□□□ -0.34
MTHFD1-204ENST00000553405 DNM1P34Q6PK57 102 aa12.93□□□□□ -0.34
MTHFD1-204ENST00000553405 HIST2H3AQ71DI3 136 aa12.93□□□□□ -0.34
MTHFD1-204ENST00000553405 SSX8Q7RTT4 187 aa12.93□□□□□ -0.34
MTHFD1-204ENST00000553405 MDP1Q86V88 176 aa12.93□□□□□ -0.34
MTHFD1-204ENST00000553405 ZNF584Q8IVC4 421 aa12.93□□□□□ -0.34
MTHFD1-204ENST00000553405 CCDC36Q8IYA8 594 aa12.93□□□□□ -0.34
MTHFD1-204ENST00000553405 ZC3HAV1LQ96H79 300 aaKnown RBP12.93□□□□□ -0.34
MTHFD1-204ENST00000553405 SEC61A2Q9H9S3 476 aa12.93□□□□□ -0.34
MTHFD1-204ENST00000553405 LHFPL6Q9Y693 200 aa12.93□□□□□ -0.34
MTHFD1-204ENST00000553405 LRBAP50851 2863 aa12.93□□□□□ -0.34
MTHFD1-204ENST00000553405 A0A1W2PPR1 153 aa12.92□□□□□ -0.34
MTHFD1-204ENST00000553405 DPRXA6NFQ7 191 aa12.92□□□□□ -0.34
MTHFD1-204ENST00000553405 PRR23D1E9PI22 279 aaPredicted RBP12.92□□□□□ -0.34
MTHFD1-204ENST00000553405 PRODHO43272 600 aa12.92□□□□□ -0.34
MTHFD1-204ENST00000553405 TLX2O43763 284 aaPredicted RBP12.92□□□□□ -0.34
MTHFD1-204ENST00000553405 PRR23D2P0DMB1 279 aaPredicted RBP12.92□□□□□ -0.34
MTHFD1-204ENST00000553405 CBR1P16152 277 aa12.92□□□□□ -0.34
MTHFD1-204ENST00000553405 ZNF14P17017 642 aaPredicted RBP12.92□□□□□ -0.34
MTHFD1-204ENST00000553405 AQP4P55087 323 aa12.92□□□□□ -0.34
MTHFD1-204ENST00000553405 SNRPGP62308 76 aaKnown RBP12.92□□□□□ -0.34
MTHFD1-204ENST00000553405 LSM6P62312 80 aaKnown RBP12.92□□□□□ -0.34
MTHFD1-204ENST00000553405 GLO1Q04760 184 aa12.92□□□□□ -0.34
MTHFD1-204ENST00000553405 SGCAQ16586 387 aa12.92□□□□□ -0.34
MTHFD1-204ENST00000553405 MEP1BQ16820 701 aa12.92□□□□□ -0.34
MTHFD1-204ENST00000553405 C3orf36Q3SXR2 165 aa12.92□□□□□ -0.34
MTHFD1-204ENST00000553405 USP51Q70EK9 711 aa12.92□□□□□ -0.34
MTHFD1-204ENST00000553405 CXXC5Q7LFL8 322 aaKnown RBP12.92□□□□□ -0.34
MTHFD1-204ENST00000553405 WFDC8Q8IUA0 241 aa12.92□□□□□ -0.34
MTHFD1-204ENST00000553405 ZNF511Q8NB15 262 aa12.92□□□□□ -0.34
MTHFD1-204ENST00000553405 PROKR2Q8NFJ6 384 aa12.92□□□□□ -0.34
MTHFD1-204ENST00000553405 OR8J1Q8NGP2 316 aa12.92□□□□□ -0.34
MTHFD1-204ENST00000553405 IL4I1Q96RQ9 567 aa12.92□□□□□ -0.34
MTHFD1-204ENST00000553405 TMEM204Q9BSN7 226 aa12.92□□□□□ -0.34
MTHFD1-204ENST00000553405 RERGLQ9H628 205 aa12.92□□□□□ -0.34
MTHFD1-204ENST00000553405 PLCE1Q9P212 2302 aa12.92□□□□□ -0.34
MTHFD1-204ENST00000553405 COMMD3-BMI1R4GMX3 469 aa12.92□□□□□ -0.34
MTHFD1-204ENST00000553405 IGHV1-18A0A0C4DH31 117 aa12.91□□□□□ -0.34
MTHFD1-204ENST00000553405 GLCEO94923 617 aa12.91□□□□□ -0.34
MTHFD1-204ENST00000553405 CELA3BP08861 270 aa12.91□□□□□ -0.34
MTHFD1-204ENST00000553405 ZNF32P17041 273 aa12.91□□□□□ -0.34
MTHFD1-204ENST00000553405 TEKQ02763 1124 aa12.91□□□□□ -0.34
MTHFD1-204ENST00000553405 TEX30Q5JUR7 227 aa12.91□□□□□ -0.34
MTHFD1-204ENST00000553405 NXNL2Q5VZ03 156 aa12.91□□□□□ -0.34
MTHFD1-204ENST00000553405 SLC16A14Q7RTX9 510 aa12.91□□□□□ -0.34
MTHFD1-204ENST00000553405 SYT9Q86SS6 491 aa12.91□□□□□ -0.34
MTHFD1-204ENST00000553405 TIGD4Q8IY51 512 aa12.91□□□□□ -0.34
MTHFD1-204ENST00000553405 ENTHD1Q8IYW4 607 aa12.91□□□□□ -0.34
MTHFD1-204ENST00000553405 LRRC18Q8N456 261 aa12.91□□□□□ -0.34
MTHFD1-204ENST00000553405 RHOXF1Q8NHV9 184 aa12.91□□□□□ -0.34
MTHFD1-204ENST00000553405 FAM81AQ8TBF8 368 aa12.91□□□□□ -0.34
MTHFD1-204ENST00000553405 APH1BQ8WW43 257 aa12.91□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 30.2 ms