RNA–Protein interactions for RNA: ENST00000553280.1

SCFD1-209, Transcript of sec1 family domain containing 1, humanhuman

TSL 2

Gene SCFD1, Length 574 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCFD1-209ENST00000553280 MOSP00540 346 aa3.51□□□□□ -1.85
SCFD1-209ENST00000553280 CT45A6P0DMU7 189 aa3.51□□□□□ -1.85
SCFD1-209ENST00000553280 CT45A5P0DMU8 189 aa3.51□□□□□ -1.85
SCFD1-209ENST00000553280 CT45A7P0DMV0 189 aa3.51□□□□□ -1.85
SCFD1-209ENST00000553280 CALM1P0DP23 149 aa3.51□□□□□ -1.85
SCFD1-209ENST00000553280 CALM2P0DP24 149 aa3.51□□□□□ -1.85
SCFD1-209ENST00000553280 CALM3P0DP25 149 aa3.51□□□□□ -1.85
SCFD1-209ENST00000553280 CD1EP15812 388 aa3.51□□□□□ -1.85
SCFD1-209ENST00000553280 U2AF2P26368 475 aaKnown RBP eCLIP3.51□□□□□ -1.85
SCFD1-209ENST00000553280 OR1E1P30953 314 aa3.51□□□□□ -1.85
SCFD1-209ENST00000553280 HRH1P35367 487 aa3.51□□□□□ -1.85
SCFD1-209ENST00000553280 SLC26A3P40879 764 aa3.51□□□□□ -1.85
SCFD1-209ENST00000553280 BCAP31P51572 246 aa3.51□□□□□ -1.85
SCFD1-209ENST00000553280 SP4Q02446 784 aa3.51□□□□□ -1.85
SCFD1-209ENST00000553280 MXD1Q05195 221 aa3.51□□□□□ -1.85
SCFD1-209ENST00000553280 GGTLC2Q14390 218 aa3.51□□□□□ -1.85
SCFD1-209ENST00000553280 OR7A5Q15622 319 aa3.51□□□□□ -1.85
SCFD1-209ENST00000553280 PSMD5Q16401 504 aa3.51□□□□□ -1.85
SCFD1-209ENST00000553280 GUCA2BQ16661 112 aa3.51□□□□□ -1.85
SCFD1-209ENST00000553280 KCTD19Q17RG1 926 aaPredicted RBP3.51□□□□□ -1.85
SCFD1-209ENST00000553280 RFX4Q33E94 735 aa3.51□□□□□ -1.85
SCFD1-209ENST00000553280 ZBED5Q49AG3 693 aa3.51□□□□□ -1.85
SCFD1-209ENST00000553280 CT45A1Q5HYN5 189 aa3.51□□□□□ -1.85
SCFD1-209ENST00000553280 LCE3CQ5T5A8 94 aa3.51□□□□□ -1.85
SCFD1-209ENST00000553280 ANKRD22Q5VYY1 191 aa3.51□□□□□ -1.85
SCFD1-209ENST00000553280 SPECC1LQ69YQ0 1117 aa3.51□□□□□ -1.85
SCFD1-209ENST00000553280 H3F3CQ6NXT2 135 aa3.51□□□□□ -1.85
SCFD1-209ENST00000553280 LINC00173Q6ZV60 143 aa3.51□□□□□ -1.85
SCFD1-209ENST00000553280 DCAF4L2Q8NA75 395 aa3.51□□□□□ -1.85
SCFD1-209ENST00000553280 PROKR2Q8NFJ6 384 aa3.51□□□□□ -1.85
SCFD1-209ENST00000553280 OR2A1Q8NGT9 310 aa3.51□□□□□ -1.85
SCFD1-209ENST00000553280 CT45A3Q8NHU0 189 aa3.51□□□□□ -1.85
SCFD1-209ENST00000553280 ACER1Q8TDN7 264 aa3.51□□□□□ -1.85
SCFD1-209ENST00000553280 IMMP1LQ96LU5 166 aa3.51□□□□□ -1.85
SCFD1-209ENST00000553280 TSSK3Q96PN8 268 aa3.51□□□□□ -1.85
SCFD1-209ENST00000553280 SLC7A5P2Q9GIP4 190 aa3.51□□□□□ -1.85
SCFD1-209ENST00000553280 NXF3Q9H4D5 531 aaKnown RBP3.51□□□□□ -1.85
SCFD1-209ENST00000553280 FBXO44Q9H4M3 255 aa3.51□□□□□ -1.85
SCFD1-209ENST00000553280 MYOZ2Q9NPC6 264 aa3.51□□□□□ -1.85
SCFD1-209ENST00000553280 SLC25A37Q9NYZ2 338 aa3.51□□□□□ -1.85
SCFD1-209ENST00000553280 RCL1Q9Y2P8 373 aaKnown RBP3.51□□□□□ -1.85
SCFD1-209ENST00000553280 F11RQ9Y624 299 aaKnown RBP3.51□□□□□ -1.85
SCFD1-209ENST00000553280 PDS5BQ9NTI5 1447 aa3.51□□□□□ -1.85
SCFD1-209ENST00000553280 WDR62O43379 1518 aa3.5□□□□□ -1.85
SCFD1-209ENST00000553280 ZNF99A8MXY4 864 aaPredicted RBP3.5□□□□□ -1.85
SCFD1-209ENST00000553280 NUPL2O15504 423 aaKnown RBP3.5□□□□□ -1.85
SCFD1-209ENST00000553280 FKBP6O75344 327 aa3.5□□□□□ -1.85
SCFD1-209ENST00000553280 CD82P27701 267 aa3.5□□□□□ -1.85
SCFD1-209ENST00000553280 CARD18P57730 90 aa3.5□□□□□ -1.85
SCFD1-209ENST00000553280 DAZ2Q13117 558 aaKnown RBP3.5□□□□□ -1.85
SCFD1-209ENST00000553280 ZNF726P1Q15940 193 aa3.5□□□□□ -1.85
SCFD1-209ENST00000553280 MBOAT1Q6ZNC8 495 aa3.5□□□□□ -1.85
SCFD1-209ENST00000553280 TEX43Q6ZNM6 134 aa3.5□□□□□ -1.85
SCFD1-209ENST00000553280 MRPL21Q7Z2W9 205 aaKnown RBP3.5□□□□□ -1.85
SCFD1-209ENST00000553280 CMTM8Q8IZV2 173 aa3.5□□□□□ -1.85
SCFD1-209ENST00000553280 MREGQ8N565 214 aa3.5□□□□□ -1.85
SCFD1-209ENST00000553280 LRRC75AQ8NAA5 344 aa3.5□□□□□ -1.85
SCFD1-209ENST00000553280 LKAAEAR1Q8TD35 194 aa3.5□□□□□ -1.85
SCFD1-209ENST00000553280 TOP1MTQ969P6 601 aa3.5□□□□□ -1.85
SCFD1-209ENST00000553280 EEF1AKMT3Q96AZ1 226 aa3.5□□□□□ -1.85
SCFD1-209ENST00000553280 CERS2Q96G23 380 aa3.5□□□□□ -1.85
SCFD1-209ENST00000553280 CSPG4P5Q96PW8 444 aa3.5□□□□□ -1.85
SCFD1-209ENST00000553280 MRPL37Q9BZE1 423 aaKnown RBP3.5□□□□□ -1.85
SCFD1-209ENST00000553280 PIGUQ9H490 435 aa3.5□□□□□ -1.85
SCFD1-209ENST00000553280 BEX1Q9HBH7 125 aa3.5□□□□□ -1.85
SCFD1-209ENST00000553280 KCNJ16Q9NPI9 418 aa3.5□□□□□ -1.85
SCFD1-209ENST00000553280 DAZ3Q9NR90 486 aaKnown RBP3.5□□□□□ -1.85
SCFD1-209ENST00000553280 ST3GAL6Q9Y274 331 aa3.5□□□□□ -1.85
SCFD1-209ENST00000553280 HEBP2Q9Y5Z4 205 aa3.5□□□□□ -1.85
SCFD1-209ENST00000553280 A0A0J9YYE9 177 aa3.49□□□□□ -1.85
SCFD1-209ENST00000553280 A0A1B0GW55 424 aa3.49□□□□□ -1.85
SCFD1-209ENST00000553280 SLC9A3R1O14745 358 aaPredicted RBP3.49□□□□□ -1.85
SCFD1-209ENST00000553280 SIVA1O15304 175 aa3.49□□□□□ -1.85
SCFD1-209ENST00000553280 TRAF3IP2O43734 574 aaPredicted RBP3.49□□□□□ -1.85
SCFD1-209ENST00000553280 SPOPO43791 374 aa3.49□□□□□ -1.85
SCFD1-209ENST00000553280 ICOSLGO75144 302 aa3.49□□□□□ -1.85
SCFD1-209ENST00000553280 AQP8O94778 261 aa3.49□□□□□ -1.85
SCFD1-209ENST00000553280 SCELO95171 688 aa3.49□□□□□ -1.85
SCFD1-209ENST00000553280 LSM8O95777 96 aaKnown RBP3.49□□□□□ -1.85
SCFD1-209ENST00000553280 ACTL6AO96019 429 aa3.49□□□□□ -1.85
SCFD1-209ENST00000553280 IGLV1-47P01700 117 aa3.49□□□□□ -1.85
SCFD1-209ENST00000553280 TRBC1P01850 177 aa3.49□□□□□ -1.85
SCFD1-209ENST00000553280 HBE1P02100 147 aa3.49□□□□□ -1.85
SCFD1-209ENST00000553280 DUX4L2P0CJ85 424 aa3.49□□□□□ -1.85
SCFD1-209ENST00000553280 DUX4L3P0CJ86 424 aa3.49□□□□□ -1.85
SCFD1-209ENST00000553280 DUX4L4P0CJ87 422 aa3.49□□□□□ -1.85
SCFD1-209ENST00000553280 DUX4L5P0CJ88 424 aa3.49□□□□□ -1.85
SCFD1-209ENST00000553280 DUX4L6P0CJ89 424 aa3.49□□□□□ -1.85
SCFD1-209ENST00000553280 DUX4L7P0CJ90 424 aa3.49□□□□□ -1.85
SCFD1-209ENST00000553280 NUDT1P36639 197 aa3.49□□□□□ -1.85
SCFD1-209ENST00000553280 LONP1P36776 959 aaKnown RBP3.49□□□□□ -1.85
SCFD1-209ENST00000553280 NBL1P41271 181 aa3.49□□□□□ -1.85
SCFD1-209ENST00000553280 UBE2MP61081 183 aaKnown RBP3.49□□□□□ -1.85
SCFD1-209ENST00000553280 TMED1Q13445 227 aa3.49□□□□□ -1.85
SCFD1-209ENST00000553280 PRPSAP1Q14558 356 aa3.49□□□□□ -1.85
SCFD1-209ENST00000553280 DUX4L9Q6RFH8 374 aaPredicted RBP3.49□□□□□ -1.85
SCFD1-209ENST00000553280 ZNF621Q6ZSS3 439 aa3.49□□□□□ -1.85
SCFD1-209ENST00000553280 FAM122BQ7Z309 247 aa3.49□□□□□ -1.85
SCFD1-209ENST00000553280 INO80EQ8NBZ0 244 aaPredicted RBP3.49□□□□□ -1.85
SCFD1-209ENST00000553280 CCDC54Q8NEL0 328 aa3.49□□□□□ -1.85
Retrieved 100 of 20,778 RNA–protein pairs in 25.1 ms