RNA–Protein interactions for RNA: ENST00000553039.1

CKAP4-203, Transcript of cytoskeleton associated protein 4, humanhuman

TSL 4

Gene CKAP4, Length 573 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CKAP4-203ENST00000553039 PAPD5Q8NDF8 572 aaKnown RBP4.29□□□□□ -1.72
CKAP4-203ENST00000553039 OR1J2Q8NGS2 313 aa4.29□□□□□ -1.72
CKAP4-203ENST00000553039 OR5R1Q8NH85 324 aa4.29□□□□□ -1.72
CKAP4-203ENST00000553039 OR2T6Q8NHC8 308 aa4.29□□□□□ -1.72
CKAP4-203ENST00000553039 NPRL2Q8WTW4 380 aa4.29□□□□□ -1.72
CKAP4-203ENST00000553039 ATOH8Q96SQ7 321 aa4.29□□□□□ -1.72
CKAP4-203ENST00000553039 STACQ99469 402 aa4.29□□□□□ -1.72
CKAP4-203ENST00000553039 MECRQ9BV79 373 aa4.29□□□□□ -1.72
CKAP4-203ENST00000553039 CCDC106Q9BWC9 280 aa4.29□□□□□ -1.72
CKAP4-203ENST00000553039 CHID1Q9BWS9 393 aa4.29□□□□□ -1.72
CKAP4-203ENST00000553039 TAPBPLQ9BX59 468 aa4.29□□□□□ -1.72
CKAP4-203ENST00000553039 BCL2L14Q9BZR8 327 aa4.29□□□□□ -1.72
CKAP4-203ENST00000553039 MMP28Q9H239 520 aa4.29□□□□□ -1.72
CKAP4-203ENST00000553039 PIGUQ9H490 435 aa4.29□□□□□ -1.72
CKAP4-203ENST00000553039 CAB39LQ9H9S4 337 aa4.29□□□□□ -1.72
CKAP4-203ENST00000553039 MSL2Q9HCI7 577 aa4.29□□□□□ -1.72
CKAP4-203ENST00000553039 KCNK9Q9NPC2 374 aa4.29□□□□□ -1.72
CKAP4-203ENST00000553039 A4GALTQ9NPC4 353 aa4.29□□□□□ -1.72
CKAP4-203ENST00000553039 CTPS2Q9NRF8 586 aa4.29□□□□□ -1.72
CKAP4-203ENST00000553039 DUSP22Q9NRW4 184 aa4.29□□□□□ -1.72
CKAP4-203ENST00000553039 B3GNT2Q9NY97 397 aa4.29□□□□□ -1.72
CKAP4-203ENST00000553039 MYEF2Q9P2K5 600 aaKnown RBP4.29□□□□□ -1.72
CKAP4-203ENST00000553039 PRDM4Q9UKN5 801 aa4.29□□□□□ -1.72
CKAP4-203ENST00000553039 TMCO1Q9UM00 188 aa4.29□□□□□ -1.72
CKAP4-203ENST00000553039 CACNG2Q9Y698 323 aa4.29□□□□□ -1.72
CKAP4-203ENST00000553039 TET2Q6N021 2002 aaPredicted RBP4.28□□□□□ -1.72
CKAP4-203ENST00000553039 FAM90A7PA6NKC0 464 aa4.28□□□□□ -1.72
CKAP4-203ENST00000553039 FAM90A22PA8MWA6 464 aa4.28□□□□□ -1.72
CKAP4-203ENST00000553039 FAM90A12PA8MX19 464 aa4.28□□□□□ -1.72
CKAP4-203ENST00000553039 ZNF99A8MXY4 864 aaPredicted RBP4.28□□□□□ -1.72
CKAP4-203ENST00000553039 FAM90A23PA8MXZ1 464 aa4.28□□□□□ -1.72
CKAP4-203ENST00000553039 IFNL4K9M1U5 179 aa4.28□□□□□ -1.72
CKAP4-203ENST00000553039 OR7A17O14581 309 aa4.28□□□□□ -1.72
CKAP4-203ENST00000553039 TP73O15350 636 aa4.28□□□□□ -1.72
CKAP4-203ENST00000553039 SPRY3O43610 288 aa4.28□□□□□ -1.72
CKAP4-203ENST00000553039 RGS10O43665 173 aa4.28□□□□□ -1.72
CKAP4-203ENST00000553039 SCN2BO60939 215 aa4.28□□□□□ -1.72
CKAP4-203ENST00000553039 UPK3AO75631 287 aa4.28□□□□□ -1.72
CKAP4-203ENST00000553039 CLIC3O95833 236 aa4.28□□□□□ -1.72
CKAP4-203ENST00000553039 CLPTM1O96005 669 aa4.28□□□□□ -1.72
CKAP4-203ENST00000553039 CSTAP01040 98 aa4.28□□□□□ -1.72
CKAP4-203ENST00000553039 IGHV3-13P01766 116 aa4.28□□□□□ -1.72
CKAP4-203ENST00000553039 IGHV2-70P01814 119 aa4.28□□□□□ -1.72
CKAP4-203ENST00000553039 SERPINA5P05154 406 aa4.28□□□□□ -1.72
CKAP4-203ENST00000553039 OR8G3PP0DMU2 310 aa4.28□□□□□ -1.72
CKAP4-203ENST00000553039 TNFRSF1AP19438 455 aa4.28□□□□□ -1.72
CKAP4-203ENST00000553039 CCNA2P20248 432 aa4.28□□□□□ -1.72
CKAP4-203ENST00000553039 MAKP20794 623 aa4.28□□□□□ -1.72
CKAP4-203ENST00000553039 PPIFP30405 207 aaKnown RBP4.28□□□□□ -1.72
CKAP4-203ENST00000553039 GRK5P34947 590 aa4.28□□□□□ -1.72
CKAP4-203ENST00000553039 SPRP35270 261 aaPredicted RBP4.28□□□□□ -1.72
CKAP4-203ENST00000553039 SELENOPP49908 381 aa4.28□□□□□ -1.72
CKAP4-203ENST00000553039 ZNF134P52741 427 aa4.28□□□□□ -1.72
CKAP4-203ENST00000553039 UCP2P55851 309 aa4.28□□□□□ -1.72
CKAP4-203ENST00000553039 KRTAP10-11P60412 298 aa4.28□□□□□ -1.72
CKAP4-203ENST00000553039 BTG1P62324 171 aa4.28□□□□□ -1.72
CKAP4-203ENST00000553039 EGFEM1PQ0D2K5 195 aa4.28□□□□□ -1.72
CKAP4-203ENST00000553039 TP53BP2Q13625 1128 aa4.28□□□□□ -1.72
CKAP4-203ENST00000553039 DUSP5Q16690 384 aa4.28□□□□□ -1.72
CKAP4-203ENST00000553039 KCTD19Q17RG1 926 aaPredicted RBP4.28□□□□□ -1.72
CKAP4-203ENST00000553039 ZNF718Q3SXZ3 478 aa4.28□□□□□ -1.72
CKAP4-203ENST00000553039 CCNJQ5T5M9 372 aa4.28□□□□□ -1.72
CKAP4-203ENST00000553039 NOXRED1Q6NXP6 359 aa4.28□□□□□ -1.72
CKAP4-203ENST00000553039 SLC27A4Q6P1M0 643 aa4.28□□□□□ -1.72
CKAP4-203ENST00000553039 CREB3L2Q70SY1 520 aa4.28□□□□□ -1.72
CKAP4-203ENST00000553039 PIWIL3Q7Z3Z3 882 aaKnown RBP4.28□□□□□ -1.72
CKAP4-203ENST00000553039 LDLRAD3Q86YD5 345 aa4.28□□□□□ -1.72
CKAP4-203ENST00000553039 IGDCC3Q8IVU1 814 aa4.28□□□□□ -1.72
CKAP4-203ENST00000553039 TMEM99Q8N816 258 aa4.28□□□□□ -1.72
CKAP4-203ENST00000553039 BHLHE22Q8NFJ8 381 aaPredicted RBP4.28□□□□□ -1.72
CKAP4-203ENST00000553039 OR4C13Q8NGP0 309 aa4.28□□□□□ -1.72
CKAP4-203ENST00000553039 DDB2Q92466 427 aa4.28□□□□□ -1.72
CKAP4-203ENST00000553039 NSMAFQ92636 917 aa4.28□□□□□ -1.72
CKAP4-203ENST00000553039 ZIM3Q96PE6 472 aa4.28□□□□□ -1.72
CKAP4-203ENST00000553039 MS4A4EQ96PG1 132 aa4.28□□□□□ -1.72
CKAP4-203ENST00000553039 HIST1H2AAQ96QV6 131 aa4.28□□□□□ -1.72
CKAP4-203ENST00000553039 PTDSS2Q9BVG9 487 aa4.28□□□□□ -1.72
CKAP4-203ENST00000553039 FAM234AQ9H0X4 552 aa4.28□□□□□ -1.72
CKAP4-203ENST00000553039 RNF121Q9H920 327 aa4.28□□□□□ -1.72
CKAP4-203ENST00000553039 RAB18Q9NP72 206 aa4.28□□□□□ -1.72
CKAP4-203ENST00000553039 TMEM106BQ9NUM4 274 aa4.28□□□□□ -1.72
CKAP4-203ENST00000553039 SIRT5Q9NXA8 310 aa4.28□□□□□ -1.72
CKAP4-203ENST00000553039 FAM53CQ9NYF3 392 aa4.28□□□□□ -1.72
CKAP4-203ENST00000553039 SLC17A7Q9P2U7 560 aa4.28□□□□□ -1.72
CKAP4-203ENST00000553039 VPREB3Q9UKI3 123 aa4.28□□□□□ -1.72
CKAP4-203ENST00000553039 FAF1Q9UNN5 650 aaPredicted RBP4.28□□□□□ -1.72
CKAP4-203ENST00000553039 RASD1Q9Y272 281 aa4.28□□□□□ -1.72
CKAP4-203ENST00000553039 POFUT2Q9Y2G5 429 aa4.28□□□□□ -1.72
CKAP4-203ENST00000553039 SNX5Q9Y5X3 404 aa4.28□□□□□ -1.72
CKAP4-203ENST00000553039 COL7A1Q02388 2944 aa4.28□□□□□ -1.72
CKAP4-203ENST00000553039 TMED7-TICAM2A0A0A6YYA0 188 aa4.27□□□□□ -1.73
CKAP4-203ENST00000553039 CENPVL1A0A0U1RR11 272 aa4.27□□□□□ -1.73
CKAP4-203ENST00000553039 CENPVL3A0A0U1RRI6 287 aa4.27□□□□□ -1.73
CKAP4-203ENST00000553039 LIPT2A6NK58 231 aa4.27□□□□□ -1.73
CKAP4-203ENST00000553039 SH2D7A6NKC9 451 aaPredicted RBP4.27□□□□□ -1.73
CKAP4-203ENST00000553039 SURF4O15260 269 aa4.27□□□□□ -1.73
CKAP4-203ENST00000553039 EIF3HO15372 352 aaKnown RBP eCLIP4.27□□□□□ -1.73
CKAP4-203ENST00000553039 RIPK2O43353 540 aa4.27□□□□□ -1.73
CKAP4-203ENST00000553039 ENSAO43768 121 aaKnown RBP4.27□□□□□ -1.73
CKAP4-203ENST00000553039 RAMP3O60896 148 aa4.27□□□□□ -1.73
Retrieved 100 of 20,778 RNA–protein pairs in 26 ms