RNA–Protein interactions for RNA: ENST00000551623.1

PTCH1-223, Transcript of patched 1, humanhuman

TSL 1 (best)

Gene PTCH1, Length 366 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCH1-223ENST00000551623 RNF175Q8N4F7 328 aa1.83□□□□□ -2.12
PTCH1-223ENST00000551623 KLHDC1Q8N7A1 406 aa1.83□□□□□ -2.12
PTCH1-223ENST00000551623 FAM71CQ8NEG0 241 aa1.83□□□□□ -2.12
PTCH1-223ENST00000551623 OR9A2Q8NGT5 310 aa1.83□□□□□ -2.12
PTCH1-223ENST00000551623 OR5W2Q8NH69 310 aa1.83□□□□□ -2.12
PTCH1-223ENST00000551623 OR2T6Q8NHC8 308 aa1.83□□□□□ -2.12
PTCH1-223ENST00000551623 ANKRD49Q8WVL7 239 aa1.83□□□□□ -2.12
PTCH1-223ENST00000551623 TM4SF18Q96CE8 201 aa1.83□□□□□ -2.12
PTCH1-223ENST00000551623 ISOC1Q96CN7 298 aa1.83□□□□□ -2.12
PTCH1-223ENST00000551623 KLHL29Q96CT2 875 aa1.83□□□□□ -2.12
PTCH1-223ENST00000551623 TUBGCP3Q96CW5 907 aa1.83□□□□□ -2.12
PTCH1-223ENST00000551623 ZHX1-C8orf76Q96EF9 292 aa1.83□□□□□ -2.12
PTCH1-223ENST00000551623 UBXN10Q96LJ8 280 aa1.83□□□□□ -2.12
PTCH1-223ENST00000551623 NAP1L5Q96NT1 182 aaPredicted RBP1.83□□□□□ -2.12
PTCH1-223ENST00000551623 FRG2BQ96QU4 278 aa1.83□□□□□ -2.12
PTCH1-223ENST00000551623 OR5B2Q96R09 309 aa1.83□□□□□ -2.12
PTCH1-223ENST00000551623 NAP1L3Q99457 506 aaPredicted RBP1.83□□□□□ -2.12
PTCH1-223ENST00000551623 EGFL8Q99944 293 aa1.83□□□□□ -2.12
PTCH1-223ENST00000551623 TM2D3Q9BRN9 247 aa1.83□□□□□ -2.12
PTCH1-223ENST00000551623 NAT9Q9BTE0 207 aa1.83□□□□□ -2.12
PTCH1-223ENST00000551623 MCRIP2Q9BUT9 160 aaKnown RBP1.83□□□□□ -2.12
PTCH1-223ENST00000551623 CCDC106Q9BWC9 280 aa1.83□□□□□ -2.12
PTCH1-223ENST00000551623 CDCA4Q9BXL8 241 aa1.83□□□□□ -2.12
PTCH1-223ENST00000551623 MRPL1Q9BYD6 325 aaKnown RBP1.83□□□□□ -2.12
PTCH1-223ENST00000551623 SIRPDQ9H106 197 aa1.83□□□□□ -2.12
PTCH1-223ENST00000551623 NUP62CLQ9H1M0 184 aa1.83□□□□□ -2.12
PTCH1-223ENST00000551623 ANKRA2Q9H9E1 313 aa1.83□□□□□ -2.12
PTCH1-223ENST00000551623 BRF2Q9HAW0 419 aa1.83□□□□□ -2.12
PTCH1-223ENST00000551623 C3orf14Q9HBI5 128 aa1.83□□□□□ -2.12
PTCH1-223ENST00000551623 PNRC2Q9NPJ4 139 aaKnown RBP1.83□□□□□ -2.12
PTCH1-223ENST00000551623 INPP5EQ9NRR6 644 aa1.83□□□□□ -2.12
PTCH1-223ENST00000551623 C20orf96Q9NUD7 363 aaPredicted RBP1.83□□□□□ -2.12
PTCH1-223ENST00000551623 ANO10Q9NW15 660 aa1.83□□□□□ -2.12
PTCH1-223ENST00000551623 SLCO1C1Q9NYB5 712 aa1.83□□□□□ -2.12
PTCH1-223ENST00000551623 ZNF224Q9NZL3 707 aa1.83□□□□□ -2.12
PTCH1-223ENST00000551623 UPB1Q9UBR1 384 aa1.83□□□□□ -2.12
PTCH1-223ENST00000551623 CTNNAL1Q9UBT7 734 aa1.83□□□□□ -2.12
PTCH1-223ENST00000551623 SLC7A8Q9UHI5 535 aa1.83□□□□□ -2.12
PTCH1-223ENST00000551623 RAB21Q9UL25 225 aa1.83□□□□□ -2.12
PTCH1-223ENST00000551623 FOXJ3Q9UPW0 622 aa1.83□□□□□ -2.12
PTCH1-223ENST00000551623 NPTNQ9Y639 398 aa1.83□□□□□ -2.12
PTCH1-223ENST00000551623 CACNG2Q9Y698 323 aa1.83□□□□□ -2.12
PTCH1-223ENST00000551623 ZNF780BQ9Y6R6 833 aa1.83□□□□□ -2.12
PTCH1-223ENST00000551623 GIMAP1-GIMAP5A0A087WTJ2 511 aa1.82□□□□□ -2.12
PTCH1-223ENST00000551623 A0A0U1RQK1 487 aa1.82□□□□□ -2.12
PTCH1-223ENST00000551623 LOC102725191A0A1B0GVB3 256 aa1.82□□□□□ -2.12
PTCH1-223ENST00000551623 A0A1B0GWJ7 208 aa1.82□□□□□ -2.12
PTCH1-223ENST00000551623 TCRBV7S3A2A0A539 114 aa1.82□□□□□ -2.12
PTCH1-223ENST00000551623 PLSCR5A0PG75 271 aa1.82□□□□□ -2.12
PTCH1-223ENST00000551623 CEACAM18A8MTB9 384 aa1.82□□□□□ -2.12
PTCH1-223ENST00000551623 ZNF99A8MXY4 864 aaPredicted RBP1.82□□□□□ -2.12
PTCH1-223ENST00000551623 ZNF879B4DU55 563 aa1.82□□□□□ -2.12
PTCH1-223ENST00000551623 IFNL4K9M1U5 179 aa1.82□□□□□ -2.12
PTCH1-223ENST00000551623 BMPR1BO00238 502 aa1.82□□□□□ -2.12
PTCH1-223ENST00000551623 NR5A2O00482 541 aa1.82□□□□□ -2.12
PTCH1-223ENST00000551623 FAAHO00519 579 aa1.82□□□□□ -2.12
PTCH1-223ENST00000551623 ANKRD28O15084 1053 aa1.82□□□□□ -2.12
PTCH1-223ENST00000551623 ZNF208O43345 1280 aa1.82□□□□□ -2.12
PTCH1-223ENST00000551623 ENSAO43768 121 aaKnown RBP1.82□□□□□ -2.12
PTCH1-223ENST00000551623 NME6O75414 186 aaPredicted RBP1.82□□□□□ -2.12
PTCH1-223ENST00000551623 KCNK2O95069 426 aa1.82□□□□□ -2.12
PTCH1-223ENST00000551623 VAMP5O95183 116 aa1.82□□□□□ -2.12
PTCH1-223ENST00000551623 TGDSO95455 350 aa1.82□□□□□ -2.12
PTCH1-223ENST00000551623 LGI1O95970 557 aa1.82□□□□□ -2.12
PTCH1-223ENST00000551623 IFNB1P01574 187 aa1.82□□□□□ -2.12
PTCH1-223ENST00000551623 IGHV1-46P01743 117 aa1.82□□□□□ -2.12
PTCH1-223ENST00000551623 THY1P04216 161 aa1.82□□□□□ -2.12
PTCH1-223ENST00000551623 SERPINA5P05154 406 aa1.82□□□□□ -2.12
PTCH1-223ENST00000551623 KLK1P06870 262 aa1.82□□□□□ -2.12
PTCH1-223ENST00000551623 GUSBP08236 651 aa1.82□□□□□ -2.12
PTCH1-223ENST00000551623 FBP1P09467 338 aa1.82□□□□□ -2.12
PTCH1-223ENST00000551623 PCNAP12004 261 aa1.82□□□□□ -2.12
PTCH1-223ENST00000551623 HSD3B1P14060 373 aa1.82□□□□□ -2.12
PTCH1-223ENST00000551623 ETS1P14921 441 aa1.82□□□□□ -2.12
PTCH1-223ENST00000551623 PGAM1P18669 254 aa1.82□□□□□ -2.12
PTCH1-223ENST00000551623 TSPAN8P19075 237 aa1.82□□□□□ -2.12
PTCH1-223ENST00000551623 TCN1P20061 433 aaPredicted RBP1.82□□□□□ -2.12
PTCH1-223ENST00000551623 SLC6A1P30531 599 aa1.82□□□□□ -2.12
PTCH1-223ENST00000551623 CFHR2P36980 270 aa1.82□□□□□ -2.12
PTCH1-223ENST00000551623 PSMB10P40306 273 aa1.82□□□□□ -2.12
PTCH1-223ENST00000551623 FRKP42685 505 aaPredicted RBP1.82□□□□□ -2.12
PTCH1-223ENST00000551623 FOXA1P55317 472 aa1.82□□□□□ -2.12
PTCH1-223ENST00000551623 TAS2R39P59534 338 aa1.82□□□□□ -2.12
PTCH1-223ENST00000551623 KRTAP12-2P59991 146 aa1.82□□□□□ -2.12
PTCH1-223ENST00000551623 FGF12P61328 243 aa1.82□□□□□ -2.12
PTCH1-223ENST00000551623 ATP6V0D1P61421 351 aa1.82□□□□□ -2.12
PTCH1-223ENST00000551623 ERVK11-1P61568 191 aa1.82□□□□□ -2.12
PTCH1-223ENST00000551623 BTG1P62324 171 aa1.82□□□□□ -2.12
PTCH1-223ENST00000551623 BASP1P80723 227 aaKnown RBP1.82□□□□□ -2.12
PTCH1-223ENST00000551623 QPRTQ15274 297 aa1.82□□□□□ -2.12
PTCH1-223ENST00000551623 ZKSCAN8Q15776 578 aaPredicted RBP1.82□□□□□ -2.12
PTCH1-223ENST00000551623 STX1AQ16623 288 aa1.82□□□□□ -2.12
PTCH1-223ENST00000551623 GSG1Q2KHT4 349 aa1.82□□□□□ -2.12
PTCH1-223ENST00000551623 ZNF181Q2M3W8 571 aa1.82□□□□□ -2.12
PTCH1-223ENST00000551623 DDX59Q5T1V6 619 aaKnown RBP eCLIP1.82□□□□□ -2.12
PTCH1-223ENST00000551623 CCNYL2Q5T2Q4 361 aa1.82□□□□□ -2.12
PTCH1-223ENST00000551623 C9orf135Q5VTT2 229 aa1.82□□□□□ -2.12
PTCH1-223ENST00000551623 PRAMEF8Q5VWM4 474 aa1.82□□□□□ -2.12
PTCH1-223ENST00000551623 PRAMEF7Q5VXH5 474 aa1.82□□□□□ -2.12
PTCH1-223ENST00000551623 TTC19Q6DKK2 380 aaPredicted RBP1.82□□□□□ -2.12
Retrieved 100 of 20,778 RNA–protein pairs in 33.8 ms