RNA–Protein interactions for RNA: ENST00000551516.1

CPSF6-207, Transcript of cleavage and polyadenylation specific factor 6, humanhuman

TSL 2 BASIC

Gene CPSF6, Length 234 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF6-207ENST00000551516 TBXA2RP21731 343 aa1.99□□□□□ -2.09
CPSF6-207ENST00000551516 GCAP28676 217 aa1.99□□□□□ -2.09
CPSF6-207ENST00000551516 IL2RGP31785 369 aa1.99□□□□□ -2.09
CPSF6-207ENST00000551516 NKX2-1P43699 371 aaPredicted RBP1.99□□□□□ -2.09
CPSF6-207ENST00000551516 ASMTP46597 345 aa1.99□□□□□ -2.09
CPSF6-207ENST00000551516 IER3P46695 156 aa1.99□□□□□ -2.09
CPSF6-207ENST00000551516 FNTAP49354 379 aa1.99□□□□□ -2.09
CPSF6-207ENST00000551516 XKP51811 444 aa1.99□□□□□ -2.09
CPSF6-207ENST00000551516 NME5P56597 212 aa1.99□□□□□ -2.09
CPSF6-207ENST00000551516 BASP1P80723 227 aaKnown RBP1.99□□□□□ -2.09
CPSF6-207ENST00000551516 PLGLB1Q02325 96 aa1.99□□□□□ -2.09
CPSF6-207ENST00000551516 RGS1Q08116 209 aa1.99□□□□□ -2.09
CPSF6-207ENST00000551516 DMTNQ08495 405 aa1.99□□□□□ -2.09
CPSF6-207ENST00000551516 ARL16Q0P5N6 197 aa1.99□□□□□ -2.09
CPSF6-207ENST00000551516 CBX3Q13185 183 aa1.99□□□□□ -2.09
CPSF6-207ENST00000551516 SQLEQ14534 574 aa1.99□□□□□ -2.09
CPSF6-207ENST00000551516 EXOSC7Q15024 291 aaKnown RBP1.99□□□□□ -2.09
CPSF6-207ENST00000551516 RBBP5Q15291 538 aaKnown RBP1.99□□□□□ -2.09
CPSF6-207ENST00000551516 TSC22D1Q15714 1073 aa1.99□□□□□ -2.09
CPSF6-207ENST00000551516 CD226Q15762 336 aa1.99□□□□□ -2.09
CPSF6-207ENST00000551516 CLEC12BQ2HXU8 276 aa1.99□□□□□ -2.09
CPSF6-207ENST00000551516 PLPPR5Q32ZL2 321 aa1.99□□□□□ -2.09
CPSF6-207ENST00000551516 ZNF718Q3SXZ3 478 aa1.99□□□□□ -2.09
CPSF6-207ENST00000551516 GGTA1PQ4G0N0 100 aa1.99□□□□□ -2.09
CPSF6-207ENST00000551516 SLC25A53Q5H9E4 307 aa1.99□□□□□ -2.09
CPSF6-207ENST00000551516 BEX5Q5H9J7 111 aa1.99□□□□□ -2.09
CPSF6-207ENST00000551516 SPANXN3Q5MJ09 141 aa1.99□□□□□ -2.09
CPSF6-207ENST00000551516 LIPJQ5W064 366 aa1.99□□□□□ -2.09
CPSF6-207ENST00000551516 SLC35E4Q6ICL7 350 aa1.99□□□□□ -2.09
CPSF6-207ENST00000551516 FAM45BPQ6NSW5 357 aa1.99□□□□□ -2.09
CPSF6-207ENST00000551516 PODNL1Q6PEZ8 512 aa1.99□□□□□ -2.09
CPSF6-207ENST00000551516 RBMS3Q6XE24 437 aaKnown RBP1.99□□□□□ -2.09
CPSF6-207ENST00000551516 KCTD9Q7L273 389 aa1.99□□□□□ -2.09
CPSF6-207ENST00000551516 GPR141Q7Z602 305 aa1.99□□□□□ -2.09
CPSF6-207ENST00000551516 TRPT1Q86TN4 253 aaKnown RBP1.99□□□□□ -2.09
CPSF6-207ENST00000551516 PLCZ1Q86YW0 608 aa1.99□□□□□ -2.09
CPSF6-207ENST00000551516 WDFY1Q8IWB7 410 aa1.99□□□□□ -2.09
CPSF6-207ENST00000551516 PRR22Q8IZ63 422 aa1.99□□□□□ -2.09
CPSF6-207ENST00000551516 PRSS35Q8N3Z0 413 aa1.99□□□□□ -2.09
CPSF6-207ENST00000551516 GTPBP8Q8N3Z3 284 aaPredicted RBP1.99□□□□□ -2.09
CPSF6-207ENST00000551516 LIX1Q8N485 282 aa1.99□□□□□ -2.09
CPSF6-207ENST00000551516 UBL4BQ8N7F7 174 aa1.99□□□□□ -2.09
CPSF6-207ENST00000551516 GBP7Q8N8V2 638 aaPredicted RBP1.99□□□□□ -2.09
CPSF6-207ENST00000551516 ZIC4Q8N9L1 334 aa1.99□□□□□ -2.09
CPSF6-207ENST00000551516 OR7A2PQ8NGA2 310 aa1.99□□□□□ -2.09
CPSF6-207ENST00000551516 OR52B6Q8NGF0 335 aa1.99□□□□□ -2.09
CPSF6-207ENST00000551516 RHEBL1Q8TAI7 183 aa1.99□□□□□ -2.09
CPSF6-207ENST00000551516 FAM45AQ8TCE6 357 aa1.99□□□□□ -2.09
CPSF6-207ENST00000551516 LRRC8CQ8TDW0 803 aa1.99□□□□□ -2.09
CPSF6-207ENST00000551516 SKA2Q8WVK7 121 aaPredicted RBP1.99□□□□□ -2.09
CPSF6-207ENST00000551516 MAIP1Q8WWC4 291 aa1.99□□□□□ -2.09
CPSF6-207ENST00000551516 TMEM158Q8WZ71 300 aa1.99□□□□□ -2.09
CPSF6-207ENST00000551516 LRRC39Q96DD0 335 aa1.99□□□□□ -2.09
CPSF6-207ENST00000551516 OMA1Q96E52 524 aa1.99□□□□□ -2.09
CPSF6-207ENST00000551516 PIK3IP1Q96FE7 263 aa1.99□□□□□ -2.09
CPSF6-207ENST00000551516 FCRL1Q96LA6 429 aa1.99□□□□□ -2.09
CPSF6-207ENST00000551516 ZNF597Q96LX8 424 aa1.99□□□□□ -2.09
CPSF6-207ENST00000551516 TSSK2Q96PF2 358 aa1.99□□□□□ -2.09
CPSF6-207ENST00000551516 ATG101Q9BSB4 218 aa1.99□□□□□ -2.09
CPSF6-207ENST00000551516 SRXN1Q9BYN0 137 aa1.99□□□□□ -2.09
CPSF6-207ENST00000551516 TSGA10Q9BZW7 698 aa1.99□□□□□ -2.09
CPSF6-207ENST00000551516 DDX47Q9H0S4 455 aaKnown RBP1.99□□□□□ -2.09
CPSF6-207ENST00000551516 MMP28Q9H239 520 aa1.99□□□□□ -2.09
CPSF6-207ENST00000551516 MID1IP1Q9NPA3 183 aa1.99□□□□□ -2.09
CPSF6-207ENST00000551516 ESM1Q9NQ30 184 aa1.99□□□□□ -2.09
CPSF6-207ENST00000551516 DNAJC11Q9NVH1 559 aa1.99□□□□□ -2.09
CPSF6-207ENST00000551516 MS4A12Q9NXJ0 267 aa1.99□□□□□ -2.09
CPSF6-207ENST00000551516 TRMT6Q9UJA5 497 aaKnown RBP1.99□□□□□ -2.09
CPSF6-207ENST00000551516 GRID1Q9ULK0 1009 aa1.99□□□□□ -2.09
CPSF6-207ENST00000551516 ICAM5Q9UMF0 924 aa1.99□□□□□ -2.09
CPSF6-207ENST00000551516 GPR132Q9UNW8 380 aa1.99□□□□□ -2.09
CPSF6-207ENST00000551516 RNF11Q9Y3C5 154 aa1.99□□□□□ -2.09
CPSF6-207ENST00000551516 SLC25A15Q9Y619 301 aa1.99□□□□□ -2.09
CPSF6-207ENST00000551516 ARFGEF3Q5TH69 2177 aa1.99□□□□□ -2.09
CPSF6-207ENST00000551516 DNAH9Q9NYC9 4486 aa1.98□□□□□ -2.09
CPSF6-207ENST00000551516 ARHGAP21Q5T5U3 1957 aa1.98□□□□□ -2.09
CPSF6-207ENST00000551516 HERC2O95714 4834 aa1.98□□□□□ -2.09
CPSF6-207ENST00000551516 SACSQ9NZJ4 4579 aa1.98□□□□□ -2.09
CPSF6-207ENST00000551516 STAB2Q8WWQ8 2551 aa1.98□□□□□ -2.09
CPSF6-207ENST00000551516 IGKV3D-15A0A087WSY6 115 aa1.98□□□□□ -2.09
CPSF6-207ENST00000551516 C15orf38-AP3S2A0A0A6YYH1 394 aa1.98□□□□□ -2.09
CPSF6-207ENST00000551516 A0A0B4J203 849 aa1.98□□□□□ -2.09
CPSF6-207ENST00000551516 TCRBV9S1A1TA0A576 114 aa1.98□□□□□ -2.09
CPSF6-207ENST00000551516 EEF1E1-BLOC1S5C9J1V9 151 aa1.98□□□□□ -2.09
CPSF6-207ENST00000551516 E5RI56 91 aa1.98□□□□□ -2.09
CPSF6-207ENST00000551516 K7EPI3 171 aa1.98□□□□□ -2.09
CPSF6-207ENST00000551516 UBXN8O00124 270 aa1.98□□□□□ -2.09
CPSF6-207ENST00000551516 BMPR1BO00238 502 aa1.98□□□□□ -2.09
CPSF6-207ENST00000551516 EEF1E1O43324 174 aaKnown RBP1.98□□□□□ -2.09
CPSF6-207ENST00000551516 SCO2O43819 266 aa1.98□□□□□ -2.09
CPSF6-207ENST00000551516 PCDH7O60245 1069 aa1.98□□□□□ -2.09
CPSF6-207ENST00000551516 LMX1BO60663 402 aa1.98□□□□□ -2.09
CPSF6-207ENST00000551516 TBX19O60806 448 aa1.98□□□□□ -2.09
CPSF6-207ENST00000551516 SCN2BO60939 215 aa1.98□□□□□ -2.09
CPSF6-207ENST00000551516 CDK2AP2O75956 126 aa1.98□□□□□ -2.09
CPSF6-207ENST00000551516 LY6HO94772 140 aa1.98□□□□□ -2.09
CPSF6-207ENST00000551516 IGLV1-44P01699 117 aa1.98□□□□□ -2.09
CPSF6-207ENST00000551516 C1QCP02747 245 aa1.98□□□□□ -2.09
CPSF6-207ENST00000551516 IFNA16P05015 189 aa1.98□□□□□ -2.09
CPSF6-207ENST00000551516 C2P06681 752 aa1.98□□□□□ -2.09
Retrieved 100 of 20,778 RNA–protein pairs in 186.9 ms