RNA–Protein interactions for RNA: ENST00000551305.5

TMEM106C-216, Transcript of transmembrane protein 106C, humanhuman

TSL 1 (best)

Gene TMEM106C, Length 1,356 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM106C-216ENST00000551305 TMBIM4Q9HC24 238 aa12.53□□□□□ -0.4
TMEM106C-216ENST00000551305 MSL2Q9HCI7 577 aa12.53□□□□□ -0.4
TMEM106C-216ENST00000551305 NPHS2Q9NP85 383 aa12.53□□□□□ -0.4
TMEM106C-216ENST00000551305 C20orf141Q9NUB4 165 aa12.53□□□□□ -0.4
TMEM106C-216ENST00000551305 EIF3KQ9UBQ5 218 aaKnown RBP12.53□□□□□ -0.4
TMEM106C-216ENST00000551305 ZNF69Q9UC07 566 aa12.53□□□□□ -0.4
TMEM106C-216ENST00000551305 MEGF8Q7Z7M0 2845 aa12.53□□□□□ -0.4
TMEM106C-216ENST00000551305 PLSCR5A0PG75 271 aa12.52□□□□□ -0.41
TMEM106C-216ENST00000551305 NGFP01138 241 aa12.52□□□□□ -0.41
TMEM106C-216ENST00000551305 SBK2P0C263 348 aa12.52□□□□□ -0.41
TMEM106C-216ENST00000551305 ZNF133P52736 654 aaPredicted RBP12.52□□□□□ -0.41
TMEM106C-216ENST00000551305 ERVK-25P63136 954 aa12.52□□□□□ -0.41
TMEM106C-216ENST00000551305 MRPS34P82930 218 aaKnown RBP12.52□□□□□ -0.41
TMEM106C-216ENST00000551305 FOXL1Q12952 345 aa12.52□□□□□ -0.41
TMEM106C-216ENST00000551305 ARMC4Q5T2S8 1044 aa12.52□□□□□ -0.41
TMEM106C-216ENST00000551305 SHISA2Q6UWI4 295 aa12.52□□□□□ -0.41
TMEM106C-216ENST00000551305 RFPL4BQ6ZWI9 263 aa12.52□□□□□ -0.41
TMEM106C-216ENST00000551305 DHDDSQ86SQ9 333 aa12.52□□□□□ -0.41
TMEM106C-216ENST00000551305 TREML1Q86YW5 311 aa12.52□□□□□ -0.41
TMEM106C-216ENST00000551305 DEFB108BQ8NET1 73 aa12.52□□□□□ -0.41
TMEM106C-216ENST00000551305 ST7LQ8TDW4 575 aa12.52□□□□□ -0.41
TMEM106C-216ENST00000551305 INIPQ9NRY2 104 aa12.52□□□□□ -0.41
TMEM106C-216ENST00000551305 MGAM2Q2M2H8 2515 aa12.51□□□□□ -0.41
TMEM106C-216ENST00000551305 TRAPPC2LH3BP13 241 aa12.51□□□□□ -0.41
TMEM106C-216ENST00000551305 SHOX2O60902 331 aaPredicted RBP12.51□□□□□ -0.41
TMEM106C-216ENST00000551305 OR7A10O76100 309 aa12.51□□□□□ -0.41
TMEM106C-216ENST00000551305 MT-ND1P03886 318 aa12.51□□□□□ -0.41
TMEM106C-216ENST00000551305 TNFRSF1BP20333 461 aa12.51□□□□□ -0.41
TMEM106C-216ENST00000551305 GDI2P50395 445 aaKnown RBP12.51□□□□□ -0.41
TMEM106C-216ENST00000551305 CRYBA2P53672 197 aa12.51□□□□□ -0.41
TMEM106C-216ENST00000551305 LAPTM4AQ15012 233 aa12.51□□□□□ -0.41
TMEM106C-216ENST00000551305 KLF17Q5JT82 389 aaPredicted RBP12.51□□□□□ -0.41
TMEM106C-216ENST00000551305 MBNL2Q5VZF2 373 aaKnown RBP12.51□□□□□ -0.41
TMEM106C-216ENST00000551305 RBMS3Q6XE24 437 aaKnown RBP12.51□□□□□ -0.41
TMEM106C-216ENST00000551305 CLDN22Q8N7P3 220 aa12.51□□□□□ -0.41
TMEM106C-216ENST00000551305 ABHD4Q8TB40 342 aa12.51□□□□□ -0.41
TMEM106C-216ENST00000551305 SLC26A7Q8TE54 656 aa12.51□□□□□ -0.41
TMEM106C-216ENST00000551305 TMEM255BQ8WV15 326 aa12.51□□□□□ -0.41
TMEM106C-216ENST00000551305 NMD3Q96D46 503 aaKnown RBP12.51□□□□□ -0.41
TMEM106C-216ENST00000551305 C1orf147Q96MC9 270 aaPredicted RBP12.51□□□□□ -0.41
TMEM106C-216ENST00000551305 ZNF48Q96MX3 618 aaPredicted RBP12.51□□□□□ -0.41
TMEM106C-216ENST00000551305 CGREF1Q99674 301 aa12.51□□□□□ -0.41
TMEM106C-216ENST00000551305 EGLN1Q9GZT9 426 aa12.51□□□□□ -0.41
TMEM106C-216ENST00000551305 PCDHAC1Q9H158 963 aa12.51□□□□□ -0.41
TMEM106C-216ENST00000551305 WNT5BQ9H1J7 359 aa12.51□□□□□ -0.41
TMEM106C-216ENST00000551305 ZNF696Q9H7X3 374 aa12.51□□□□□ -0.41
TMEM106C-216ENST00000551305 NANOGQ9H9S0 305 aa12.51□□□□□ -0.41
TMEM106C-216ENST00000551305 EGFL7Q9UHF1 273 aa12.51□□□□□ -0.41
TMEM106C-216ENST00000551305 KLHL21Q9UJP4 597 aa12.51□□□□□ -0.41
TMEM106C-216ENST00000551305 PURGQ9UJV8 347 aaKnown RBP12.51□□□□□ -0.41
TMEM106C-216ENST00000551305 NPTNQ9Y639 398 aa12.51□□□□□ -0.41
TMEM106C-216ENST00000551305 DNAJC9-AS1A6NH13 148 aa12.5□□□□□ -0.41
TMEM106C-216ENST00000551305 CENPBD1B2RD01 187 aa12.5□□□□□ -0.41
TMEM106C-216ENST00000551305 FOXH1O75593 365 aa12.5□□□□□ -0.41
TMEM106C-216ENST00000551305 IGHV2-70P01814 119 aa12.5□□□□□ -0.41
TMEM106C-216ENST00000551305 PRTN3P24158 256 aa12.5□□□□□ -0.41
TMEM106C-216ENST00000551305 ATP4BP51164 291 aa12.5□□□□□ -0.41
TMEM106C-216ENST00000551305 SEC61A1P61619 476 aaKnown RBP12.5□□□□□ -0.41
TMEM106C-216ENST00000551305 PPP1CBP62140 327 aa12.5□□□□□ -0.41
TMEM106C-216ENST00000551305 SLC3A1Q07837 685 aa12.5□□□□□ -0.41
TMEM106C-216ENST00000551305 CD47Q08722 323 aa12.5□□□□□ -0.41
TMEM106C-216ENST00000551305 TUSC1Q2TAM9 212 aa12.5□□□□□ -0.41
TMEM106C-216ENST00000551305 SLC25A47Q6Q0C1 308 aa12.5□□□□□ -0.41
TMEM106C-216ENST00000551305 DOK3Q7L591 496 aa12.5□□□□□ -0.41
TMEM106C-216ENST00000551305 PATL1Q86TB9 770 aaKnown RBP12.5□□□□□ -0.41
TMEM106C-216ENST00000551305 OR10A6Q8NH74 314 aa12.5□□□□□ -0.41
TMEM106C-216ENST00000551305 SGTBQ96EQ0 304 aa12.5□□□□□ -0.41
TMEM106C-216ENST00000551305 OR2H1Q9GZK4 316 aa12.5□□□□□ -0.41
TMEM106C-216ENST00000551305 KAT8Q9H7Z6 458 aaKnown RBP12.5□□□□□ -0.41
TMEM106C-216ENST00000551305 NUP50Q9UKX7 468 aa12.5□□□□□ -0.41
TMEM106C-216ENST00000551305 NDUFAF1Q9Y375 327 aa12.5□□□□□ -0.41
TMEM106C-216ENST00000551305 SOX21Q9Y651 276 aaPredicted RBP12.5□□□□□ -0.41
TMEM106C-216ENST00000551305 PPIAL4EA0A075B759 164 aa12.49□□□□□ -0.41
TMEM106C-216ENST00000551305 PPIAL4CA0A0B4J2A2 164 aa12.49□□□□□ -0.41
TMEM106C-216ENST00000551305 PPIAL4DF5H284 164 aa12.49□□□□□ -0.41
TMEM106C-216ENST00000551305 ADH4P08319 380 aa12.49□□□□□ -0.41
TMEM106C-216ENST00000551305 PPIAL4FP0DN26 164 aa12.49□□□□□ -0.41
TMEM106C-216ENST00000551305 LAP3P28838 519 aa12.49□□□□□ -0.41
TMEM106C-216ENST00000551305 PCGF2P35227 344 aa12.49□□□□□ -0.41
TMEM106C-216ENST00000551305 GZMMP51124 257 aa12.49□□□□□ -0.41
TMEM106C-216ENST00000551305 DAP3P51398 398 aaKnown RBP12.49□□□□□ -0.41
TMEM106C-216ENST00000551305 TNFAIP6P98066 277 aaPredicted RBP12.49□□□□□ -0.41
TMEM106C-216ENST00000551305 ZNF154Q13106 437 aa12.49□□□□□ -0.41
TMEM106C-216ENST00000551305 TOP3AQ13472 1001 aaPredicted RBP12.49□□□□□ -0.41
TMEM106C-216ENST00000551305 PIN1Q13526 163 aaPredicted RBP12.49□□□□□ -0.41
TMEM106C-216ENST00000551305 ARMCX4Q5H9R4 360 aa12.49□□□□□ -0.41
TMEM106C-216ENST00000551305 ZNF774Q6NX45 483 aa12.49□□□□□ -0.41
TMEM106C-216ENST00000551305 JAZF1Q86VZ6 243 aa12.49□□□□□ -0.41
TMEM106C-216ENST00000551305 LRRC8CQ8TDW0 803 aa12.49□□□□□ -0.41
TMEM106C-216ENST00000551305 POP5Q969H6 163 aaKnown RBP12.49□□□□□ -0.41
TMEM106C-216ENST00000551305 THOC1Q96FV9 657 aaKnown RBP12.49□□□□□ -0.41
TMEM106C-216ENST00000551305 POFUT1Q9H488 388 aa12.49□□□□□ -0.41
TMEM106C-216ENST00000551305 UNKLQ9H9P5 680 aaKnown RBP12.49□□□□□ -0.41
TMEM106C-216ENST00000551305 CYSLTR2Q9NS75 346 aa12.49□□□□□ -0.41
TMEM106C-216ENST00000551305 ZDHHC8Q9ULC8 765 aa12.49□□□□□ -0.41
TMEM106C-216ENST00000551305 SH3GLB1Q9Y371 365 aa12.49□□□□□ -0.41
TMEM106C-216ENST00000551305 AUP1Q9Y679 476 aa12.49□□□□□ -0.41
TMEM106C-216ENST00000551305 CD55P08174 381 aa12.48□□□□□ -0.41
TMEM106C-216ENST00000551305 TSPAN19P0C672 248 aa12.48□□□□□ -0.41
TMEM106C-216ENST00000551305 LIPAP38571 399 aa12.48□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 30.4 ms