RNA–Protein interactions for RNA: ENST00000550872.1

CHMP1A-209, Transcript of charged multivesicular body protein 1A, humanhuman

TSL 2

Gene CHMP1A, Length 533 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP1A-209ENST00000550872 CCNB1IP1Q9NPC3 277 aa14.13□□□□□ -0.15
CHMP1A-209ENST00000550872 POLE4Q9NR33 117 aa14.13□□□□□ -0.15
CHMP1A-209ENST00000550872 FKBP7Q9Y680 259 aa14.13□□□□□ -0.15
CHMP1A-209ENST00000550872 RTTNQ86VV8 2226 aa14.13□□□□□ -0.15
CHMP1A-209ENST00000550872 IGLV1-36A0A0B4J1U3 117 aa14.12□□□□□ -0.15
CHMP1A-209ENST00000550872 IGKV3-15P01624 115 aa14.12□□□□□ -0.15
CHMP1A-209ENST00000550872 IGLV1-44P01699 117 aa14.12□□□□□ -0.15
CHMP1A-209ENST00000550872 SCG5P05408 212 aa14.12□□□□□ -0.15
CHMP1A-209ENST00000550872 CELA3BP08861 270 aa14.12□□□□□ -0.15
CHMP1A-209ENST00000550872 CST2P09228 141 aa14.12□□□□□ -0.15
CHMP1A-209ENST00000550872 CECR9P0C854 216 aa14.12□□□□□ -0.15
CHMP1A-209ENST00000550872 ZNF3P17036 446 aa14.12□□□□□ -0.15
CHMP1A-209ENST00000550872 IGFBP5P24593 272 aa14.12□□□□□ -0.15
CHMP1A-209ENST00000550872 DBPQ10586 325 aaPredicted RBP14.12□□□□□ -0.15
CHMP1A-209ENST00000550872 CRMP1Q14194 572 aa14.12□□□□□ -0.15
CHMP1A-209ENST00000550872 C3orf36Q3SXR2 165 aa14.12□□□□□ -0.15
CHMP1A-209ENST00000550872 ADAM5Q6NVV9 412 aa14.12□□□□□ -0.15
CHMP1A-209ENST00000550872 SLC22A25Q6T423 547 aa14.12□□□□□ -0.15
CHMP1A-209ENST00000550872 DEPDC4Q8N2C3 294 aa14.12□□□□□ -0.15
CHMP1A-209ENST00000550872 RADILQ96JH8 1075 aa14.12□□□□□ -0.15
CHMP1A-209ENST00000550872 LURAP1Q96LR2 239 aa14.12□□□□□ -0.15
CHMP1A-209ENST00000550872 KCNS3Q9BQ31 491 aa14.12□□□□□ -0.15
CHMP1A-209ENST00000550872 RACGAP1Q9H0H5 632 aa14.12□□□□□ -0.15
CHMP1A-209ENST00000550872 PLEKHF2Q9H8W4 249 aa14.12□□□□□ -0.15
CHMP1A-209ENST00000550872 SLC25A19Q9HC21 320 aa14.12□□□□□ -0.15
CHMP1A-209ENST00000550872 EMC7Q9NPA0 242 aa14.12□□□□□ -0.15
CHMP1A-209ENST00000550872 CMC2Q9NRP2 79 aa14.12□□□□□ -0.15
CHMP1A-209ENST00000550872 ENOPH1Q9UHY7 261 aa14.12□□□□□ -0.15
CHMP1A-209ENST00000550872 TMEFF2Q9UIK5 374 aaPredicted RBP14.12□□□□□ -0.15
CHMP1A-209ENST00000550872 OTOGQ6ZRI0 2925 aa14.12□□□□□ -0.15
CHMP1A-209ENST00000550872 FAM171A2A8MVW0 826 aa14.11□□□□□ -0.15
CHMP1A-209ENST00000550872 MPZL1O95297 269 aa14.11□□□□□ -0.15
CHMP1A-209ENST00000550872 GPANK1O95872 356 aa14.11□□□□□ -0.15
CHMP1A-209ENST00000550872 PYCR1P32322 319 aa14.11□□□□□ -0.15
CHMP1A-209ENST00000550872 PPP2R2BQ00005 443 aa14.11□□□□□ -0.15
CHMP1A-209ENST00000550872 NAAAQ02083 359 aa14.11□□□□□ -0.15
CHMP1A-209ENST00000550872 GLO1Q04760 184 aa14.11□□□□□ -0.15
CHMP1A-209ENST00000550872 SPOCK1Q08629 439 aa14.11□□□□□ -0.15
CHMP1A-209ENST00000550872 ENDOGQ14249 297 aaKnown RBP14.11□□□□□ -0.15
CHMP1A-209ENST00000550872 RAB39AQ14964 217 aa14.11□□□□□ -0.15
CHMP1A-209ENST00000550872 PTGES3Q15185 160 aaKnown RBP14.11□□□□□ -0.15
CHMP1A-209ENST00000550872 UGT2A3Q6UWM9 527 aa14.11□□□□□ -0.15
CHMP1A-209ENST00000550872 ZBTB46Q86UZ6 589 aa14.11□□□□□ -0.15
CHMP1A-209ENST00000550872 KBTBD8Q8NFY9 601 aa14.11□□□□□ -0.15
CHMP1A-209ENST00000550872 OR9Q1Q8NGQ5 310 aa14.11□□□□□ -0.15
CHMP1A-209ENST00000550872 OR2T4Q8NH00 348 aa14.11□□□□□ -0.15
CHMP1A-209ENST00000550872 AKAP1Q92667 903 aaKnown RBP eCLIP14.11□□□□□ -0.15
CHMP1A-209ENST00000550872 OTULINQ96BN8 352 aa14.11□□□□□ -0.15
CHMP1A-209ENST00000550872 FBXO17Q96EF6 278 aa14.11□□□□□ -0.15
CHMP1A-209ENST00000550872 PLEKHA8Q96JA3 519 aa14.11□□□□□ -0.15
CHMP1A-209ENST00000550872 ZNF75AQ96N20 296 aa14.11□□□□□ -0.15
CHMP1A-209ENST00000550872 TEP1Q99973 2627 aaKnown RBP14.11□□□□□ -0.15
CHMP1A-209ENST00000550872 C9orf16Q9BUW7 83 aa14.11□□□□□ -0.15
CHMP1A-209ENST00000550872 ZNF416Q9BWM5 594 aa14.11□□□□□ -0.15
CHMP1A-209ENST00000550872 UBTD1Q9HAC8 227 aa14.11□□□□□ -0.15
CHMP1A-209ENST00000550872 PLCE1Q9P212 2302 aa14.11□□□□□ -0.15
CHMP1A-209ENST00000550872 POU2F3Q9UKI9 436 aa14.11□□□□□ -0.15
CHMP1A-209ENST00000550872 FBXL3Q9UKT7 428 aa14.11□□□□□ -0.15
CHMP1A-209ENST00000550872 MOKQ9UQ07 419 aa14.11□□□□□ -0.15
CHMP1A-209ENST00000550872 C12orf71A8MTZ7 269 aa14.1□□□□□ -0.15
CHMP1A-209ENST00000550872 SHISA9B4DS77 424 aa14.1□□□□□ -0.15
CHMP1A-209ENST00000550872 EI24O14681 340 aa14.1□□□□□ -0.15
CHMP1A-209ENST00000550872 HLA-DQA2P01906 255 aa14.1□□□□□ -0.15
CHMP1A-209ENST00000550872 CRYAAP02489 173 aa14.1□□□□□ -0.15
CHMP1A-209ENST00000550872 MMP7P09237 267 aaPredicted RBP14.1□□□□□ -0.15
CHMP1A-209ENST00000550872 ANPEPP15144 967 aa14.1□□□□□ -0.15
CHMP1A-209ENST00000550872 ZNF32P17041 273 aa14.1□□□□□ -0.15
CHMP1A-209ENST00000550872 PCBD1P61457 104 aa14.1□□□□□ -0.15
CHMP1A-209ENST00000550872 HSF2Q03933 536 aa14.1□□□□□ -0.15
CHMP1A-209ENST00000550872 PLP2Q04941 152 aa14.1□□□□□ -0.15
CHMP1A-209ENST00000550872 DAG1Q14118 895 aa14.1□□□□□ -0.15
CHMP1A-209ENST00000550872 RCN1Q15293 331 aa14.1□□□□□ -0.15
CHMP1A-209ENST00000550872 OTPQ5XKR4 325 aa14.1□□□□□ -0.15
CHMP1A-209ENST00000550872 ZSCAN2Q7Z7L9 614 aaPredicted RBP14.1□□□□□ -0.15
CHMP1A-209ENST00000550872 MYPOPQ86VE0 399 aaPredicted RBP14.1□□□□□ -0.15
CHMP1A-209ENST00000550872 CBR4Q8N4T8 237 aa14.1□□□□□ -0.15
CHMP1A-209ENST00000550872 PROKR2Q8NFJ6 384 aa14.1□□□□□ -0.15
CHMP1A-209ENST00000550872 C11orf40Q8WZ69 217 aa14.1□□□□□ -0.15
CHMP1A-209ENST00000550872 NRGNQ92686 78 aa14.1□□□□□ -0.15
CHMP1A-209ENST00000550872 NEUROG1Q92886 237 aa14.1□□□□□ -0.15
CHMP1A-209ENST00000550872 MS4A3Q96HJ5 214 aa14.1□□□□□ -0.15
CHMP1A-209ENST00000550872 RIBC2Q9H4K1 309 aa14.1□□□□□ -0.15
CHMP1A-209ENST00000550872 TVP23BQ9NYZ1 205 aa14.1□□□□□ -0.15
CHMP1A-209ENST00000550872 TIMM10BQ9Y5J6 103 aa14.1□□□□□ -0.15
CHMP1A-209ENST00000550872 ORC6Q9Y5N6 252 aa14.1□□□□□ -0.15
CHMP1A-209ENST00000550872 ATP23Q9Y6H3 246 aa14.1□□□□□ -0.15
CHMP1A-209ENST00000550872 IQCMA0A1B0GVH7 501 aa14.09□□□□□ -0.15
CHMP1A-209ENST00000550872 FAM183AA6NL82 134 aa14.09□□□□□ -0.15
CHMP1A-209ENST00000550872 ATP6V1G2-DDX39BF2Z307 99 aa14.09□□□□□ -0.15
CHMP1A-209ENST00000550872 SURF4O15260 269 aa14.09□□□□□ -0.15
CHMP1A-209ENST00000550872 SERPINA5P05154 406 aa14.09□□□□□ -0.15
CHMP1A-209ENST00000550872 ALPLP05186 524 aa14.09□□□□□ -0.15
CHMP1A-209ENST00000550872 GYPBP06028 91 aa14.09□□□□□ -0.15
CHMP1A-209ENST00000550872 ZNF14P17017 642 aaPredicted RBP14.09□□□□□ -0.15
CHMP1A-209ENST00000550872 PAICSP22234 425 aaKnown RBP14.09□□□□□ -0.15
CHMP1A-209ENST00000550872 EPHA2P29317 976 aa14.09□□□□□ -0.15
CHMP1A-209ENST00000550872 SLC25A1P53007 311 aa14.09□□□□□ -0.15
CHMP1A-209ENST00000550872 LSM6P62312 80 aaKnown RBP14.09□□□□□ -0.15
CHMP1A-209ENST00000550872 ELF3P78545 371 aaPredicted RBP14.09□□□□□ -0.15
CHMP1A-209ENST00000550872 SNAPC1Q16533 368 aa14.09□□□□□ -0.15
Retrieved 100 of 20,778 RNA–protein pairs in 31.4 ms