RNA–Protein interactions for RNA: ENST00000549883.5

HDAC7-229, Transcript of histone deacetylase 7, humanhuman

TSL 3

Gene HDAC7, Length 537 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC7-229ENST00000549883 NDUFB2O95178 105 aa8.4□□□□□ -1.06
HDAC7-229ENST00000549883 ITGA2P17301 1181 aa8.4□□□□□ -1.06
HDAC7-229ENST00000549883 CCNOP22674 350 aa8.4□□□□□ -1.06
HDAC7-229ENST00000549883 CALB2P22676 271 aa8.4□□□□□ -1.06
HDAC7-229ENST00000549883 GLRXP35754 106 aa8.4□□□□□ -1.06
HDAC7-229ENST00000549883 WNT5AP41221 380 aa8.4□□□□□ -1.06
HDAC7-229ENST00000549883 HNRNPA0Q13151 305 aaKnown RBP8.4□□□□□ -1.06
HDAC7-229ENST00000549883 CARTPTQ16568 116 aa8.4□□□□□ -1.06
HDAC7-229ENST00000549883 ANKDD1AQ495B1 522 aa8.4□□□□□ -1.06
HDAC7-229ENST00000549883 NRN1LQ496H8 165 aa8.4□□□□□ -1.06
HDAC7-229ENST00000549883 FAM27BQ5VT28 67 aa8.4□□□□□ -1.06
HDAC7-229ENST00000549883 LCN8Q6JVE9 175 aa8.4□□□□□ -1.06
HDAC7-229ENST00000549883 ZNF774Q6NX45 483 aa8.4□□□□□ -1.06
HDAC7-229ENST00000549883 PGBD2Q6P3X8 592 aa8.4□□□□□ -1.06
HDAC7-229ENST00000549883 CLEC2AQ6UVW9 174 aa8.4□□□□□ -1.06
HDAC7-229ENST00000549883 ZNF101Q8IZC7 436 aa8.4□□□□□ -1.06
HDAC7-229ENST00000549883 OR9Q2Q8NGE9 314 aa8.4□□□□□ -1.06
HDAC7-229ENST00000549883 OR4C15Q8NGM1 316 aa8.4□□□□□ -1.06
HDAC7-229ENST00000549883 MCUR1Q96AQ8 359 aa8.4□□□□□ -1.06
HDAC7-229ENST00000549883 CCDC124Q96CT7 223 aaKnown RBP8.4□□□□□ -1.06
HDAC7-229ENST00000549883 POM121L2Q96KW2 1035 aa8.4□□□□□ -1.06
HDAC7-229ENST00000549883 SAMD8Q96LT4 415 aa8.4□□□□□ -1.06
HDAC7-229ENST00000549883 GPX7Q96SL4 187 aaPredicted RBP8.4□□□□□ -1.06
HDAC7-229ENST00000549883 BTBD10Q9BSF8 475 aa8.4□□□□□ -1.06
HDAC7-229ENST00000549883 ZNF416Q9BWM5 594 aa8.4□□□□□ -1.06
HDAC7-229ENST00000549883 OR2H1Q9GZK4 316 aa8.4□□□□□ -1.06
HDAC7-229ENST00000549883 SYT4Q9H2B2 425 aa8.4□□□□□ -1.06
HDAC7-229ENST00000549883 OR52D1Q9H346 318 aa8.4□□□□□ -1.06
HDAC7-229ENST00000549883 RERGLQ9H628 205 aa8.4□□□□□ -1.06
HDAC7-229ENST00000549883 POLE4Q9NR33 117 aa8.4□□□□□ -1.06
HDAC7-229ENST00000549883 NDE1Q9NXR1 346 aa8.4□□□□□ -1.06
HDAC7-229ENST00000549883 STX18Q9P2W9 335 aaKnown RBP8.4□□□□□ -1.06
HDAC7-229ENST00000549883 AURKCQ9UQB9 309 aa8.4□□□□□ -1.06
HDAC7-229ENST00000549883 CMAHPQ9Y471 501 aa8.4□□□□□ -1.06
HDAC7-229ENST00000549883 LYVE1Q9Y5Y7 322 aa8.4□□□□□ -1.06
HDAC7-229ENST00000549883 VWC2LB2RUY7 222 aa8.39□□□□□ -1.07
HDAC7-229ENST00000549883 ACOT8O14734 319 aa8.39□□□□□ -1.07
HDAC7-229ENST00000549883 OR10H3O60404 316 aa8.39□□□□□ -1.07
HDAC7-229ENST00000549883 SLC16A7O60669 478 aa8.39□□□□□ -1.07
HDAC7-229ENST00000549883 NGFP01138 241 aa8.39□□□□□ -1.07
HDAC7-229ENST00000549883 CST2P09228 141 aa8.39□□□□□ -1.07
HDAC7-229ENST00000549883 NAT2P11245 290 aa8.39□□□□□ -1.07
HDAC7-229ENST00000549883 STOMP27105 288 aa8.39□□□□□ -1.07
HDAC7-229ENST00000549883 SDHAP31040 664 aa8.39□□□□□ -1.07
HDAC7-229ENST00000549883 RBMXP38159 391 aaKnown RBP8.39□□□□□ -1.07
HDAC7-229ENST00000549883 MPV17P39210 176 aa8.39□□□□□ -1.07
HDAC7-229ENST00000549883 MAGEA2P43356 314 aa8.39□□□□□ -1.07
HDAC7-229ENST00000549883 GSSP48637 474 aa8.39□□□□□ -1.07
HDAC7-229ENST00000549883 PPOXP50336 477 aa8.39□□□□□ -1.07
HDAC7-229ENST00000549883 MNAT1P51948 309 aa8.39□□□□□ -1.07
HDAC7-229ENST00000549883 GALK2Q01415 458 aa8.39□□□□□ -1.07
HDAC7-229ENST00000549883 HSF2Q03933 536 aa8.39□□□□□ -1.07
HDAC7-229ENST00000549883 GLO1Q04760 184 aa8.39□□□□□ -1.07
HDAC7-229ENST00000549883 TRIM25Q14258 630 aaKnown RBP8.39□□□□□ -1.07
HDAC7-229ENST00000549883 MEP1BQ16820 701 aa8.39□□□□□ -1.07
HDAC7-229ENST00000549883 SPATS1Q496A3 300 aa8.39□□□□□ -1.07
HDAC7-229ENST00000549883 SPATA46Q5T0L3 261 aa8.39□□□□□ -1.07
HDAC7-229ENST00000549883 FAM205BPQ63HN1 556 aa8.39□□□□□ -1.07
HDAC7-229ENST00000549883 ZNF770Q6IQ21 691 aaPredicted RBP8.39□□□□□ -1.07
HDAC7-229ENST00000549883 C1orf94Q6P1W5 598 aa8.39□□□□□ -1.07
HDAC7-229ENST00000549883 SMARCD3Q6STE5 483 aa8.39□□□□□ -1.07
HDAC7-229ENST00000549883 DHFR2Q86XF0 187 aa8.39□□□□□ -1.07
HDAC7-229ENST00000549883 ICA1LQ8NDH6 482 aa8.39□□□□□ -1.07
HDAC7-229ENST00000549883 FANK1Q8TC84 345 aa8.39□□□□□ -1.07
HDAC7-229ENST00000549883 BCAS4Q8TDM0 211 aa8.39□□□□□ -1.07
HDAC7-229ENST00000549883 ERMAPQ96PL5 475 aaPredicted RBP8.39□□□□□ -1.07
HDAC7-229ENST00000549883 THTPAQ9BU02 230 aa8.39□□□□□ -1.07
HDAC7-229ENST00000549883 PLA2G12AQ9BZM1 189 aa8.39□□□□□ -1.07
HDAC7-229ENST00000549883 NUAK2Q9H093 628 aa8.39□□□□□ -1.07
HDAC7-229ENST00000549883 FN3KQ9H479 309 aa8.39□□□□□ -1.07
HDAC7-229ENST00000549883 POFUT1Q9H488 388 aa8.39□□□□□ -1.07
HDAC7-229ENST00000549883 EGLN3Q9H6Z9 239 aa8.39□□□□□ -1.07
HDAC7-229ENST00000549883 CDH20Q9HBT6 801 aa8.39□□□□□ -1.07
HDAC7-229ENST00000549883 DYNLRB1Q9NP97 96 aa8.39□□□□□ -1.07
HDAC7-229ENST00000549883 CCNB1IP1Q9NPC3 277 aa8.39□□□□□ -1.07
HDAC7-229ENST00000549883 REV1Q9UBZ9 1251 aa8.39□□□□□ -1.07
HDAC7-229ENST00000549883 SLC7A8Q9UHI5 535 aa8.39□□□□□ -1.07
HDAC7-229ENST00000549883 DUSP13Q9UII6 198 aa8.39□□□□□ -1.07
HDAC7-229ENST00000549883 COA3Q9Y2R0 106 aaPredicted RBP8.39□□□□□ -1.07
HDAC7-229ENST00000549883 NIPBLQ6KC79 2804 aaeCLIP8.38□□□□□ -1.07
HDAC7-229ENST00000549883 IGHV4-61A0A0C4DH41 118 aa8.38□□□□□ -1.07
HDAC7-229ENST00000549883 IQCMA0A1B0GVH7 501 aa8.38□□□□□ -1.07
HDAC7-229ENST00000549883 C5orf49A4QMS7 147 aa8.38□□□□□ -1.07
HDAC7-229ENST00000549883 FAM171A2A8MVW0 826 aa8.38□□□□□ -1.07
HDAC7-229ENST00000549883 TNFRSF11BO00300 401 aa8.38□□□□□ -1.07
HDAC7-229ENST00000549883 XKRYO14609 159 aa8.38□□□□□ -1.07
HDAC7-229ENST00000549883 NCR1O76036 304 aa8.38□□□□□ -1.07
HDAC7-229ENST00000549883 SNAP29O95721 258 aa8.38□□□□□ -1.07
HDAC7-229ENST00000549883 TXNDC12O95881 172 aa8.38□□□□□ -1.07
HDAC7-229ENST00000549883 GASTP01350 101 aa8.38□□□□□ -1.07
HDAC7-229ENST00000549883 HPXP02790 462 aa8.38□□□□□ -1.07
HDAC7-229ENST00000549883 LCKP06239 509 aa8.38□□□□□ -1.07
HDAC7-229ENST00000549883 BMP4P12644 408 aa8.38□□□□□ -1.07
HDAC7-229ENST00000549883 DAOP14920 347 aa8.38□□□□□ -1.07
HDAC7-229ENST00000549883 HIST1H1CP16403 213 aaKnown RBP8.38□□□□□ -1.07
HDAC7-229ENST00000549883 MSR1P21757 451 aa8.38□□□□□ -1.07
HDAC7-229ENST00000549883 FPR3P25089 353 aa8.38□□□□□ -1.07
HDAC7-229ENST00000549883 ERFP50548 548 aa8.38□□□□□ -1.07
HDAC7-229ENST00000549883 HMGA2P52926 109 aa8.38□□□□□ -1.07
HDAC7-229ENST00000549883 UCP2P55851 309 aa8.38□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 56.5 ms