RNA–Protein interactions for RNA: ENST00000549578.5

VPS29-206, Transcript of VPS29, retromer complex component, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VPS29, Length 1,523 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS29-206ENST00000549578 MSR1P21757 451 aa18.53■□□□□ 0.56
VPS29-206ENST00000549578 CAPGP40121 348 aa18.53■□□□□ 0.56
VPS29-206ENST00000549578 UBE2NP61088 152 aaKnown RBP18.53■□□□□ 0.56
VPS29-206ENST00000549578 SNCBQ16143 134 aa18.53■□□□□ 0.56
VPS29-206ENST00000549578 MEP1BQ16820 701 aa18.53■□□□□ 0.56
VPS29-206ENST00000549578 NRN1LQ496H8 165 aa18.53■□□□□ 0.56
VPS29-206ENST00000549578 P2RY8Q86VZ1 359 aa18.53■□□□□ 0.56
VPS29-206ENST00000549578 SLC26A10Q8NG04 563 aa18.53■□□□□ 0.56
VPS29-206ENST00000549578 FGFBP3Q8TAT2 258 aa18.53■□□□□ 0.56
VPS29-206ENST00000549578 C11orf40Q8WZ69 217 aa18.53■□□□□ 0.56
VPS29-206ENST00000549578 PSMG3-AS1Q96PY0 264 aa18.53■□□□□ 0.56
VPS29-206ENST00000549578 ZNF224Q9NZL3 707 aa18.53■□□□□ 0.56
VPS29-206ENST00000549578 AASSQ9UDR5 926 aa18.53■□□□□ 0.56
VPS29-206ENST00000549578 NDRG3Q9UGV2 375 aa18.53■□□□□ 0.56
VPS29-206ENST00000549578 SLC25A15Q9Y619 301 aa18.53■□□□□ 0.56
VPS29-206ENST00000549578 TVP23AA6NH52 213 aa18.52■□□□□ 0.56
VPS29-206ENST00000549578 TFP02787 698 aa18.52■□□□□ 0.56
VPS29-206ENST00000549578 SLC2A5P22732 501 aa18.52■□□□□ 0.56
VPS29-206ENST00000549578 RPS7P62081 194 aaKnown RBP18.52■□□□□ 0.56
VPS29-206ENST00000549578 HSF2Q03933 536 aa18.52■□□□□ 0.56
VPS29-206ENST00000549578 APOFQ13790 326 aa18.52■□□□□ 0.56
VPS29-206ENST00000549578 C6orf52Q5T4I8 152 aa18.52■□□□□ 0.56
VPS29-206ENST00000549578 LINC01590Q5TEZ4 76 aa18.52■□□□□ 0.56
VPS29-206ENST00000549578 AADACL4Q5VUY2 407 aa18.52■□□□□ 0.56
VPS29-206ENST00000549578 B3GLCTQ6Y288 498 aa18.52■□□□□ 0.56
VPS29-206ENST00000549578 MEX3BQ6ZN04 569 aaKnown RBP18.52■□□□□ 0.56
VPS29-206ENST00000549578 SLC16A14Q7RTX9 510 aa18.52■□□□□ 0.56
VPS29-206ENST00000549578 DMRTC2Q8IXT2 367 aaPredicted RBP18.52■□□□□ 0.56
VPS29-206ENST00000549578 ENTHD1Q8IYW4 607 aa18.52■□□□□ 0.56
VPS29-206ENST00000549578 DEPDC4Q8N2C3 294 aa18.52■□□□□ 0.56
VPS29-206ENST00000549578 ZNF511Q8NB15 262 aa18.52■□□□□ 0.56
VPS29-206ENST00000549578 HSD17B8Q92506 261 aa18.52■□□□□ 0.56
VPS29-206ENST00000549578 MUCL1Q96DR8 90 aa18.52■□□□□ 0.56
VPS29-206ENST00000549578 USB1Q9BQ65 265 aaKnown RBP18.52■□□□□ 0.56
VPS29-206ENST00000549578 MRPL22Q9NWU5 206 aaKnown RBP18.52■□□□□ 0.56
VPS29-206ENST00000549578 DNAJC27Q9NZQ0 273 aa18.52■□□□□ 0.56
VPS29-206ENST00000549578 ARPC4-TTLL3A0A0A6YYG9 625 aa18.51■□□□□ 0.55
VPS29-206ENST00000549578 H0YAE9 185 aa18.51■□□□□ 0.55
VPS29-206ENST00000549578 PRODHO43272 600 aa18.51■□□□□ 0.55
VPS29-206ENST00000549578 GNAO1P09471 354 aa18.51■□□□□ 0.55
VPS29-206ENST00000549578 CD79AP11912 226 aa18.51■□□□□ 0.55
VPS29-206ENST00000549578 KIR2DL3P43628 341 aa18.51■□□□□ 0.55
VPS29-206ENST00000549578 PIGFQ07326 219 aa18.51■□□□□ 0.55
VPS29-206ENST00000549578 ENDOGQ14249 297 aaKnown RBP18.51■□□□□ 0.55
VPS29-206ENST00000549578 PPA1Q15181 289 aa18.51■□□□□ 0.55
VPS29-206ENST00000549578 FAM27BQ5VT28 67 aa18.51■□□□□ 0.55
VPS29-206ENST00000549578 ZNF691Q5VV52 312 aa18.51■□□□□ 0.55
VPS29-206ENST00000549578 WFDC8Q8IUA0 241 aa18.51■□□□□ 0.55
VPS29-206ENST00000549578 TRUB1Q8WWH5 349 aaKnown RBP18.51■□□□□ 0.55
VPS29-206ENST00000549578 TFAP2CQ92754 450 aa18.51■□□□□ 0.55
VPS29-206ENST00000549578 ZMYND19Q96E35 227 aaPredicted RBP18.51■□□□□ 0.55
VPS29-206ENST00000549578 APOL4Q9BPW4 351 aa18.51■□□□□ 0.55
VPS29-206ENST00000549578 ZNF416Q9BWM5 594 aa18.51■□□□□ 0.55
VPS29-206ENST00000549578 C1QTNF6Q9BXI9 259 aa18.51■□□□□ 0.55
VPS29-206ENST00000549578 NOX3Q9HBY0 568 aa18.51■□□□□ 0.55
VPS29-206ENST00000549578 CRIM1Q9NZV1 1036 aa18.51■□□□□ 0.55
VPS29-206ENST00000549578 AMDHD2Q9Y303 409 aa18.51■□□□□ 0.55
VPS29-206ENST00000549578 GLCEO94923 617 aa18.5■□□□□ 0.55
VPS29-206ENST00000549578 HOXB1P14653 301 aaPredicted RBP18.5■□□□□ 0.55
VPS29-206ENST00000549578 FMO3P31513 532 aa18.5■□□□□ 0.55
VPS29-206ENST00000549578 SNRPGP62308 76 aaKnown RBP18.5■□□□□ 0.55
VPS29-206ENST00000549578 IL5RAQ01344 420 aa18.5■□□□□ 0.55
VPS29-206ENST00000549578 TEKQ02763 1124 aa18.5■□□□□ 0.55
VPS29-206ENST00000549578 NXNL2Q5VZ03 156 aa18.5■□□□□ 0.55
VPS29-206ENST00000549578 ACBD4Q8NC06 268 aa18.5■□□□□ 0.55
VPS29-206ENST00000549578 FBXO17Q96EF6 278 aa18.5■□□□□ 0.55
VPS29-206ENST00000549578 OBP2BQ9NPH6 170 aa18.5■□□□□ 0.55
VPS29-206ENST00000549578 MOKQ9UQ07 419 aa18.5■□□□□ 0.55
VPS29-206ENST00000549578 CCDC182A6NF36 153 aa18.49■□□□□ 0.55
VPS29-206ENST00000549578 GABRB1P18505 474 aa18.49■□□□□ 0.55
VPS29-206ENST00000549578 PEX19P40855 299 aa18.49■□□□□ 0.55
VPS29-206ENST00000549578 KCNMB1Q16558 191 aa18.49■□□□□ 0.55
VPS29-206ENST00000549578 SEZ6L2Q6UXD5 910 aa18.49■□□□□ 0.55
VPS29-206ENST00000549578 MDP1Q86V88 176 aa18.49■□□□□ 0.55
VPS29-206ENST00000549578 CCDC36Q8IYA8 594 aa18.49■□□□□ 0.55
VPS29-206ENST00000549578 NANOS1Q8WY41 292 aaKnown RBP18.49■□□□□ 0.55
VPS29-206ENST00000549578 ZNF582Q96NG8 517 aaPredicted RBP18.49■□□□□ 0.55
VPS29-206ENST00000549578 DACH2Q96NX9 599 aa18.49■□□□□ 0.55
VPS29-206ENST00000549578 WDR76Q9H967 626 aa18.49■□□□□ 0.55
VPS29-206ENST00000549578 B3GNT2Q9NY97 397 aa18.49■□□□□ 0.55
VPS29-206ENST00000549578 H2AFY2Q9P0M6 372 aaPredicted RBP18.49■□□□□ 0.55
VPS29-206ENST00000549578 COMMD3-BMI1R4GMX3 469 aa18.49■□□□□ 0.55
VPS29-206ENST00000549578 ENTPD6O75354 484 aa18.49■□□□□ 0.55
VPS29-206ENST00000549578 WNT11O96014 354 aa18.49■□□□□ 0.55
VPS29-206ENST00000549578 CST2P09228 141 aa18.49■□□□□ 0.55
VPS29-206ENST00000549578 COL8A1P27658 744 aa18.49■□□□□ 0.55
VPS29-206ENST00000549578 GSTT1P30711 240 aa18.49■□□□□ 0.55
VPS29-206ENST00000549578 RPS27P42677 84 aaKnown RBP18.49■□□□□ 0.55
VPS29-206ENST00000549578 SLC36A2Q495M3 483 aa18.49■□□□□ 0.55
VPS29-206ENST00000549578 SLC35D3Q5M8T2 416 aa18.49■□□□□ 0.55
VPS29-206ENST00000549578 MEPCEQ7L2J0 689 aaKnown RBP18.49■□□□□ 0.55
VPS29-206ENST00000549578 GID4Q8IVV7 300 aa18.49■□□□□ 0.55
VPS29-206ENST00000549578 OR10H5Q8NGA6 315 aa18.49■□□□□ 0.55
VPS29-206ENST00000549578 RHOXF1Q8NHV9 184 aa18.49■□□□□ 0.55
VPS29-206ENST00000549578 TEAD3Q99594 435 aa18.49■□□□□ 0.55
VPS29-206ENST00000549578 KCNN2Q9H2S1 579 aa18.49■□□□□ 0.55
VPS29-206ENST00000549578 NPAP1Q9NZP6 1156 aa18.49■□□□□ 0.55
VPS29-206ENST00000549578 ASH2LQ9UBL3 628 aa18.49■□□□□ 0.55
VPS29-206ENST00000549578 POLR1DQ9Y2S0 133 aa18.49■□□□□ 0.55
VPS29-206ENST00000549578 UBL3O95164 117 aa18.48■□□□□ 0.55
Retrieved 100 of 20,778 RNA–protein pairs in 39.4 ms