RNA–Protein interactions for RNA: ENST00000548938.5

HDAC7-228, Transcript of histone deacetylase 7, humanhuman

TSL 5

Gene HDAC7, Length 2,719 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC7-228ENST00000548938 POM121BA6NF01 834 aa12.4□□□□□ -0.42
HDAC7-228ENST00000548938 ZNF735P0CB33 412 aa12.4□□□□□ -0.42
HDAC7-228ENST00000548938 SLC35E2P0CK97 266 aa12.4□□□□□ -0.42
HDAC7-228ENST00000548938 C5AR1P21730 350 aa12.4□□□□□ -0.42
HDAC7-228ENST00000548938 CFPP27918 469 aa12.4□□□□□ -0.42
HDAC7-228ENST00000548938 ACTR1BP42025 376 aa12.4□□□□□ -0.42
HDAC7-228ENST00000548938 HOXA1P49639 335 aaPredicted RBP12.4□□□□□ -0.42
HDAC7-228ENST00000548938 ACTR1AP61163 376 aa12.4□□□□□ -0.42
HDAC7-228ENST00000548938 SSBP1Q04837 148 aaKnown RBP12.4□□□□□ -0.42
HDAC7-228ENST00000548938 RASGEF1BQ0VAM2 473 aa12.4□□□□□ -0.42
HDAC7-228ENST00000548938 MANEAQ5SRI9 462 aa12.4□□□□□ -0.42
HDAC7-228ENST00000548938 HAGHLQ6PII5 290 aaPredicted RBP12.4□□□□□ -0.42
HDAC7-228ENST00000548938 CCDC36Q8IYA8 594 aa12.4□□□□□ -0.42
HDAC7-228ENST00000548938 TMEM229BQ8NBD8 167 aa12.4□□□□□ -0.42
HDAC7-228ENST00000548938 OR1J4Q8NGS1 313 aa12.4□□□□□ -0.42
HDAC7-228ENST00000548938 PPP1R14AQ96A00 147 aa12.4□□□□□ -0.42
HDAC7-228ENST00000548938 FOXN4Q96NZ1 517 aa12.4□□□□□ -0.42
HDAC7-228ENST00000548938 TSPAN32Q96QS1 320 aa12.4□□□□□ -0.42
HDAC7-228ENST00000548938 USB1Q9BQ65 265 aaKnown RBP12.4□□□□□ -0.42
HDAC7-228ENST00000548938 CLEC1BQ9P126 229 aa12.4□□□□□ -0.42
HDAC7-228ENST00000548938 ERVK-19Q9WJR5 959 aa12.4□□□□□ -0.42
HDAC7-228ENST00000548938 F5P12259 2224 aa12.4□□□□□ -0.43
HDAC7-228ENST00000548938 KCNAB3O43448 404 aa12.39□□□□□ -0.43
HDAC7-228ENST00000548938 PRKNO60260 465 aaPredicted RBP12.39□□□□□ -0.43
HDAC7-228ENST00000548938 SLC25A4P12235 298 aa12.39□□□□□ -0.43
HDAC7-228ENST00000548938 GDI1P31150 447 aa12.39□□□□□ -0.43
HDAC7-228ENST00000548938 CASRP41180 1078 aa12.39□□□□□ -0.43
HDAC7-228ENST00000548938 CBX5P45973 191 aa12.39□□□□□ -0.43
HDAC7-228ENST00000548938 SLC35D2Q76EJ3 337 aa12.39□□□□□ -0.43
HDAC7-228ENST00000548938 OR13C8Q8NGS7 320 aa12.39□□□□□ -0.43
HDAC7-228ENST00000548938 PHYHIPLQ96FC7 376 aa12.39□□□□□ -0.43
HDAC7-228ENST00000548938 LPAR4Q99677 370 aa12.39□□□□□ -0.43
HDAC7-228ENST00000548938 SYT4Q9H2B2 425 aa12.39□□□□□ -0.43
HDAC7-228ENST00000548938 ESRP2Q9H6T0 727 aaKnown RBP12.39□□□□□ -0.43
HDAC7-228ENST00000548938 MYEF2Q9P2K5 600 aaKnown RBP12.39□□□□□ -0.43
HDAC7-228ENST00000548938 ATPIF1Q9UII2 106 aa12.39□□□□□ -0.43
HDAC7-228ENST00000548938 F5H0A9 414 aaPredicted RBP12.39□□□□□ -0.43
HDAC7-228ENST00000548938 TGFBR3LH3BV60 316 aa12.39□□□□□ -0.43
HDAC7-228ENST00000548938 SULT2B1O00204 365 aa12.39□□□□□ -0.43
HDAC7-228ENST00000548938 OIP5O43482 229 aa12.39□□□□□ -0.43
HDAC7-228ENST00000548938 HCRTR1O43613 425 aa12.39□□□□□ -0.43
HDAC7-228ENST00000548938 ADH1BP00325 375 aa12.39□□□□□ -0.43
HDAC7-228ENST00000548938 CCR4P51679 360 aa12.39□□□□□ -0.43
HDAC7-228ENST00000548938 EGR3Q06889 387 aa12.39□□□□□ -0.43
HDAC7-228ENST00000548938 NKPD1Q17RQ9 610 aa12.39□□□□□ -0.43
HDAC7-228ENST00000548938 CCDC157Q569K6 752 aa12.39□□□□□ -0.43
HDAC7-228ENST00000548938 FAM166AQ6J272 317 aa12.39□□□□□ -0.43
HDAC7-228ENST00000548938 ACOT7LQ6ZUV0 252 aa12.39□□□□□ -0.43
HDAC7-228ENST00000548938 BPIFB2Q8N4F0 458 aa12.39□□□□□ -0.43
HDAC7-228ENST00000548938 DNAJA3Q96EY1 480 aa12.39□□□□□ -0.43
HDAC7-228ENST00000548938 SCARF2Q96GP6 870 aaPredicted RBP12.39□□□□□ -0.43
HDAC7-228ENST00000548938 INTS14Q96SY0 518 aa12.39□□□□□ -0.43
HDAC7-228ENST00000548938 ELF4Q99607 663 aaPredicted RBP12.39□□□□□ -0.43
HDAC7-228ENST00000548938 SLC19A3Q9BZV2 496 aa12.39□□□□□ -0.43
HDAC7-228ENST00000548938 S1PR5Q9H228 398 aa12.39□□□□□ -0.43
HDAC7-228ENST00000548938 GAREM1Q9H706 876 aa12.39□□□□□ -0.43
HDAC7-228ENST00000548938 MMP25Q9NPA2 562 aa12.39□□□□□ -0.43
HDAC7-228ENST00000548938 GRHPRQ9UBQ7 328 aa12.39□□□□□ -0.43
HDAC7-228ENST00000548938 PLEKHA6Q9Y2H5 1048 aa12.39□□□□□ -0.43
HDAC7-228ENST00000548938 BRWD1Q9NSI6 2320 aa12.39□□□□□ -0.43
HDAC7-228ENST00000548938 LOC100509620A0A075B734 347 aa12.39□□□□□ -0.43
HDAC7-228ENST00000548938 CTSBP07858 339 aa12.39□□□□□ -0.43
HDAC7-228ENST00000548938 RPL18Q07020 188 aaKnown RBP12.39□□□□□ -0.43
HDAC7-228ENST00000548938 SRSF4Q08170 494 aaKnown RBP12.39□□□□□ -0.43
HDAC7-228ENST00000548938 GPR18Q14330 331 aa12.39□□□□□ -0.43
HDAC7-228ENST00000548938 LPCAT3Q6P1A2 487 aa12.39□□□□□ -0.43
HDAC7-228ENST00000548938 UQCC3Q6UW78 93 aa12.39□□□□□ -0.43
HDAC7-228ENST00000548938 UNQ6126/PRO20091Q6UXV3 157 aa12.39□□□□□ -0.43
HDAC7-228ENST00000548938 SVBPQ8N300 66 aa12.39□□□□□ -0.43
HDAC7-228ENST00000548938 CSNK1A1LQ8N752 337 aa12.39□□□□□ -0.43
HDAC7-228ENST00000548938 TSACCQ96A04 125 aaPredicted RBP12.39□□□□□ -0.43
HDAC7-228ENST00000548938 ELSPBP1Q96BH3 223 aa12.39□□□□□ -0.43
HDAC7-228ENST00000548938 SLC6A7Q99884 636 aa12.39□□□□□ -0.43
HDAC7-228ENST00000548938 SLC17A5Q9NRA2 495 aa12.39□□□□□ -0.43
HDAC7-228ENST00000548938 CGGBP1Q9UFW8 167 aaPredicted RBP12.39□□□□□ -0.43
HDAC7-228ENST00000548938 LHX6Q9UPM6 363 aa12.39□□□□□ -0.43
HDAC7-228ENST00000548938 VSIG4Q9Y279 399 aa12.39□□□□□ -0.43
HDAC7-228ENST00000548938 OR14I1A6ND48 311 aa12.38□□□□□ -0.43
HDAC7-228ENST00000548938 FAM25EA8MYX2 175 aa12.38□□□□□ -0.43
HDAC7-228ENST00000548938 ZNF736B4DX44 427 aaPredicted RBP12.38□□□□□ -0.43
HDAC7-228ENST00000548938 H0Y8X5 98 aa12.38□□□□□ -0.43
HDAC7-228ENST00000548938 CYB5AP00167 134 aa12.38□□□□□ -0.43
HDAC7-228ENST00000548938 IFI6P09912 130 aa12.38□□□□□ -0.43
HDAC7-228ENST00000548938 APEHP13798 732 aaKnown RBP12.38□□□□□ -0.43
HDAC7-228ENST00000548938 PVALBP20472 110 aaPredicted RBP12.38□□□□□ -0.43
HDAC7-228ENST00000548938 SCRN3Q0VDG4 424 aa12.38□□□□□ -0.43
HDAC7-228ENST00000548938 MOGAT2Q3SYC2 334 aa12.38□□□□□ -0.43
HDAC7-228ENST00000548938 PRAMEF17Q5VTA0 474 aa12.38□□□□□ -0.43
HDAC7-228ENST00000548938 RAB12Q6IQ22 244 aa12.38□□□□□ -0.43
HDAC7-228ENST00000548938 OR4S1Q8NGB4 309 aa12.38□□□□□ -0.43
HDAC7-228ENST00000548938 OR9A4Q8NGU2 314 aa12.38□□□□□ -0.43
HDAC7-228ENST00000548938 ZBTB8AQ96BR9 441 aa12.38□□□□□ -0.43
HDAC7-228ENST00000548938 SLC41A2Q96JW4 573 aa12.38□□□□□ -0.43
HDAC7-228ENST00000548938 EDEM2Q9BV94 578 aa12.38□□□□□ -0.43
HDAC7-228ENST00000548938 ELOVL3Q9HB03 270 aa12.38□□□□□ -0.43
HDAC7-228ENST00000548938 Q9N2J8 555 aa12.38□□□□□ -0.43
HDAC7-228ENST00000548938 MYOZ1Q9NP98 299 aaPredicted RBP12.38□□□□□ -0.43
HDAC7-228ENST00000548938 EPHA6Q9UF33 1036 aa12.38□□□□□ -0.43
HDAC7-228ENST00000548938 KLK13Q9UKR3 277 aa12.38□□□□□ -0.43
HDAC7-228ENST00000548938 FADS1O60427 444 aa12.38□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 45.1 ms