RNA–Protein interactions for RNA: ENST00000548436.5

PRPF40B-208, Transcript of pre-mRNA processing factor 40 homolog B, humanhuman

TSL 2

Gene PRPF40B, Length 2,059 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF40B-208ENST00000548436 CENPBD1B2RD01 187 aa16.6■□□□□ 0.25
PRPF40B-208ENST00000548436 ZNF208O43345 1280 aa16.6■□□□□ 0.25
PRPF40B-208ENST00000548436 GDF9O60383 454 aa16.6■□□□□ 0.25
PRPF40B-208ENST00000548436 KHDRBS3O75525 346 aaKnown RBP16.6■□□□□ 0.25
PRPF40B-208ENST00000548436 OR2J2O76002 312 aa16.6■□□□□ 0.25
PRPF40B-208ENST00000548436 ITGA5P08648 1049 aa16.6■□□□□ 0.25
PRPF40B-208ENST00000548436 FBXO45P0C2W1 286 aa16.6■□□□□ 0.25
PRPF40B-208ENST00000548436 MNDAP41218 407 aa16.6■□□□□ 0.25
PRPF40B-208ENST00000548436 RAP1BP61224 184 aa16.6■□□□□ 0.25
PRPF40B-208ENST00000548436 SNRPD2P62316 118 aaKnown RBP16.6■□□□□ 0.25
PRPF40B-208ENST00000548436 RAP1AP62834 184 aa16.6■□□□□ 0.25
PRPF40B-208ENST00000548436 POU3F1Q03052 451 aaPredicted RBP16.6■□□□□ 0.25
PRPF40B-208ENST00000548436 TLE3Q04726 772 aa16.6■□□□□ 0.25
PRPF40B-208ENST00000548436 MFSD13AQ14CX5 517 aa16.6■□□□□ 0.25
PRPF40B-208ENST00000548436 BTBD16Q32M84 506 aa16.6■□□□□ 0.25
PRPF40B-208ENST00000548436 TMEM205Q6UW68 189 aa16.6■□□□□ 0.25
PRPF40B-208ENST00000548436 NDUFAF7Q7L592 441 aa16.6■□□□□ 0.25
PRPF40B-208ENST00000548436 PPP1R3BQ86XI6 285 aa16.6■□□□□ 0.25
PRPF40B-208ENST00000548436 OR10G3Q8NGC4 313 aa16.6■□□□□ 0.25
PRPF40B-208ENST00000548436 OR51D1Q8NGF3 324 aa16.6■□□□□ 0.25
PRPF40B-208ENST00000548436 PIGKQ92643 395 aa16.6■□□□□ 0.25
PRPF40B-208ENST00000548436 DDIT4LQ96D03 193 aa16.6■□□□□ 0.25
PRPF40B-208ENST00000548436 CHST11Q9NPF2 352 aa16.6■□□□□ 0.25
PRPF40B-208ENST00000548436 ZNF275Q9NSD4 429 aaPredicted RBP16.6■□□□□ 0.25
PRPF40B-208ENST00000548436 NKIRAS2Q9NYR9 191 aa16.6■□□□□ 0.25
PRPF40B-208ENST00000548436 PPP4R1LQ9P1A2 415 aa16.6■□□□□ 0.25
PRPF40B-208ENST00000548436 MYOTQ9UBF9 498 aa16.6■□□□□ 0.25
PRPF40B-208ENST00000548436 ZNF222Q9UK12 451 aa16.6■□□□□ 0.25
PRPF40B-208ENST00000548436 FBXL3Q9UKT7 428 aa16.6■□□□□ 0.25
PRPF40B-208ENST00000548436 PHF3Q92576 2039 aaKnown RBP16.6■□□□□ 0.25
PRPF40B-208ENST00000548436 ANKRD20A5PA0PJZ0 165 aa16.6■□□□□ 0.25
PRPF40B-208ENST00000548436 SRSF10O75494 262 aaKnown RBP16.6■□□□□ 0.25
PRPF40B-208ENST00000548436 GLSO94925 669 aaPredicted RBP16.6■□□□□ 0.25
PRPF40B-208ENST00000548436 DAP3P51398 398 aaKnown RBP16.6■□□□□ 0.25
PRPF40B-208ENST00000548436 EFNB2P52799 333 aa16.6■□□□□ 0.25
PRPF40B-208ENST00000548436 HSF1Q00613 529 aa16.6■□□□□ 0.25
PRPF40B-208ENST00000548436 INPP5JQ15735 1006 aaPredicted RBP16.6■□□□□ 0.25
PRPF40B-208ENST00000548436 ZNF454Q8N9F8 522 aa16.6■□□□□ 0.25
PRPF40B-208ENST00000548436 NKX3-1Q99801 234 aaPredicted RBP16.6■□□□□ 0.25
PRPF40B-208ENST00000548436 GON7Q9BXV9 100 aa16.6■□□□□ 0.25
PRPF40B-208ENST00000548436 LIPT2A6NK58 231 aa16.59■□□□□ 0.25
PRPF40B-208ENST00000548436 ETV2O00321 342 aaPredicted RBP16.59■□□□□ 0.25
PRPF40B-208ENST00000548436 ZFAND5O76080 213 aa16.59■□□□□ 0.25
PRPF40B-208ENST00000548436 CFPP27918 469 aa16.59■□□□□ 0.25
PRPF40B-208ENST00000548436 SCAND1P57086 179 aa16.59■□□□□ 0.25
PRPF40B-208ENST00000548436 AP3S2P59780 193 aa16.59■□□□□ 0.25
PRPF40B-208ENST00000548436 MRPS10P82664 201 aaKnown RBP16.59■□□□□ 0.25
PRPF40B-208ENST00000548436 C19orf57Q0VDD7 668 aa16.59■□□□□ 0.25
PRPF40B-208ENST00000548436 CCDC92Q53HC0 331 aaPredicted RBP16.59■□□□□ 0.25
PRPF40B-208ENST00000548436 MAMSTRQ6ZN01 415 aa16.59■□□□□ 0.25
PRPF40B-208ENST00000548436 LINC00346Q8IVM7 164 aa16.59■□□□□ 0.25
PRPF40B-208ENST00000548436 ASB5Q8WWX0 329 aa16.59■□□□□ 0.25
PRPF40B-208ENST00000548436 DEDD2Q8WXF8 326 aa16.59■□□□□ 0.25
PRPF40B-208ENST00000548436 HYLS1Q96M11 299 aa16.59■□□□□ 0.25
PRPF40B-208ENST00000548436 ACTR6Q9GZN1 396 aa16.59■□□□□ 0.25
PRPF40B-208ENST00000548436 KCNK15Q9H427 330 aa16.59■□□□□ 0.25
PRPF40B-208ENST00000548436 EMC7Q9NPA0 242 aa16.59■□□□□ 0.25
PRPF40B-208ENST00000548436 ACOT7O00154 380 aa16.58■□□□□ 0.25
PRPF40B-208ENST00000548436 XRCC3O43542 346 aa16.58■□□□□ 0.25
PRPF40B-208ENST00000548436 ZNF780AO75290 641 aaPredicted RBP16.58■□□□□ 0.25
PRPF40B-208ENST00000548436 LDOC1O95751 146 aaPredicted RBP16.58■□□□□ 0.25
PRPF40B-208ENST00000548436 PSMB1P20618 241 aaKnown RBP16.58■□□□□ 0.25
PRPF40B-208ENST00000548436 DCTDP32321 178 aa16.58■□□□□ 0.25
PRPF40B-208ENST00000548436 PLPPR5Q32ZL2 321 aa16.58■□□□□ 0.25
PRPF40B-208ENST00000548436 PHF19Q5T6S3 580 aa16.58■□□□□ 0.25
PRPF40B-208ENST00000548436 FAAP20Q6NZ36 180 aa16.58■□□□□ 0.25
PRPF40B-208ENST00000548436 DNM1P46Q6ZS02 220 aa16.58■□□□□ 0.25
PRPF40B-208ENST00000548436 DCXRQ7Z4W1 244 aa16.58■□□□□ 0.25
PRPF40B-208ENST00000548436 BIVMQ86UB2 503 aa16.58■□□□□ 0.25
PRPF40B-208ENST00000548436 OR2I1PQ8NGU4 316 aa16.58■□□□□ 0.25
PRPF40B-208ENST00000548436 POC1BQ8TC44 478 aa16.58■□□□□ 0.25
PRPF40B-208ENST00000548436 THRSPQ92748 146 aa16.58■□□□□ 0.25
PRPF40B-208ENST00000548436 ZFP64Q9NPA5 681 aa16.58■□□□□ 0.25
PRPF40B-208ENST00000548436 DHDHQ9UQ10 334 aa16.58■□□□□ 0.25
PRPF40B-208ENST00000548436 DMDP11532 3685 aa16.58■□□□□ 0.25
PRPF40B-208ENST00000548436 NAP1L6A6NFF2 107 aa16.58■□□□□ 0.24
PRPF40B-208ENST00000548436 MEN1O00255 615 aa16.58■□□□□ 0.24
PRPF40B-208ENST00000548436 DOK2O60496 412 aa16.58■□□□□ 0.24
PRPF40B-208ENST00000548436 HPXP02790 462 aa16.58■□□□□ 0.24
PRPF40B-208ENST00000548436 ZNF823P16415 610 aa16.58■□□□□ 0.24
PRPF40B-208ENST00000548436 MAP2K6P52564 334 aa16.58■□□□□ 0.24
PRPF40B-208ENST00000548436 PCK2Q16822 640 aa16.58■□□□□ 0.24
PRPF40B-208ENST00000548436 ELFN2Q5R3F8 820 aa16.58■□□□□ 0.24
PRPF40B-208ENST00000548436 TMEM225Q6GV28 225 aa16.58■□□□□ 0.24
PRPF40B-208ENST00000548436 ST7LQ8TDW4 575 aa16.58■□□□□ 0.24
PRPF40B-208ENST00000548436 C5orf34Q96MH7 638 aa16.58■□□□□ 0.24
PRPF40B-208ENST00000548436 EMC6Q9BV81 110 aa16.58■□□□□ 0.24
PRPF40B-208ENST00000548436 SLC26A1Q9H2B4 701 aa16.58■□□□□ 0.24
PRPF40B-208ENST00000548436 GAREM1Q9H706 876 aa16.58■□□□□ 0.24
PRPF40B-208ENST00000548436 STMN3Q9NZ72 180 aa16.58■□□□□ 0.24
PRPF40B-208ENST00000548436 EMC9Q9Y3B6 208 aa16.58■□□□□ 0.24
PRPF40B-208ENST00000548436 HSPB11Q9Y547 144 aa16.58■□□□□ 0.24
PRPF40B-208ENST00000548436 FRYLO94915 3013 aa16.57■□□□□ 0.24
PRPF40B-208ENST00000548436 CCDC163A0A0D9SF12 145 aa16.57■□□□□ 0.24
PRPF40B-208ENST00000548436 NPIPB13A6NJU9 1138 aa16.57■□□□□ 0.24
PRPF40B-208ENST00000548436 NPIPB4C9JG80 1138 aa16.57■□□□□ 0.24
PRPF40B-208ENST00000548436 PEX14O75381 377 aa16.57■□□□□ 0.24
PRPF40B-208ENST00000548436 CTAG2O75638 210 aa16.57■□□□□ 0.24
PRPF40B-208ENST00000548436 POU3F4P49335 361 aa16.57■□□□□ 0.24
PRPF40B-208ENST00000548436 ZNF41P51814 821 aaPredicted RBP16.57■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 24.7 ms