RNA–Protein interactions for RNA: ENST00000548420.1

PTCH1-217, Transcript of patched 1, humanhuman

TSL 5

Gene PTCH1, Length 553 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCH1-217ENST00000548420 SLC38A2Q96QD8 506 aa11.98□□□□□ -0.49
PTCH1-217ENST00000548420 RBM4BQ9BQ04 359 aaKnown RBP11.98□□□□□ -0.49
PTCH1-217ENST00000548420 ULBP2Q9BZM5 246 aa11.98□□□□□ -0.49
PTCH1-217ENST00000548420 C1orf21Q9H246 121 aa11.98□□□□□ -0.49
PTCH1-217ENST00000548420 INIPQ9NRY2 104 aa11.98□□□□□ -0.49
PTCH1-217ENST00000548420 ZNF224Q9NZL3 707 aa11.98□□□□□ -0.49
PTCH1-217ENST00000548420 CDC42EP2O14613 210 aa11.97□□□□□ -0.49
PTCH1-217ENST00000548420 IGHMP01871 453 aa11.97□□□□□ -0.49
PTCH1-217ENST00000548420 H1F0P07305 194 aaKnown RBP11.97□□□□□ -0.49
PTCH1-217ENST00000548420 MSMBP08118 114 aa11.97□□□□□ -0.49
PTCH1-217ENST00000548420 SLC9A3P48764 834 aa11.97□□□□□ -0.49
PTCH1-217ENST00000548420 KRTAP10-3P60369 221 aa11.97□□□□□ -0.49
PTCH1-217ENST00000548420 MELKQ14680 651 aa11.97□□□□□ -0.49
PTCH1-217ENST00000548420 TAF11Q15544 211 aa11.97□□□□□ -0.49
PTCH1-217ENST00000548420 ASPHD2Q6ICH7 369 aa11.97□□□□□ -0.49
PTCH1-217ENST00000548420 ZNF730Q6ZMV8 503 aa11.97□□□□□ -0.49
PTCH1-217ENST00000548420 PIWIL3Q7Z3Z3 882 aaKnown RBP11.97□□□□□ -0.49
PTCH1-217ENST00000548420 C1QL2Q7Z5L3 287 aa11.97□□□□□ -0.49
PTCH1-217ENST00000548420 BPIFB2Q8N4F0 458 aa11.97□□□□□ -0.49
PTCH1-217ENST00000548420 SIGLECL1Q8N7X8 197 aa11.97□□□□□ -0.49
PTCH1-217ENST00000548420 WFDC12Q8WWY7 111 aa11.97□□□□□ -0.49
PTCH1-217ENST00000548420 NSMCE2Q96MF7 247 aa11.97□□□□□ -0.49
PTCH1-217ENST00000548420 FOXB1Q99853 325 aa11.97□□□□□ -0.49
PTCH1-217ENST00000548420 CITED1Q99966 193 aa11.97□□□□□ -0.49
PTCH1-217ENST00000548420 KATNB1Q9BVA0 655 aa11.97□□□□□ -0.49
PTCH1-217ENST00000548420 TMPRSS13Q9BYE2 586 aa11.97□□□□□ -0.49
PTCH1-217ENST00000548420 TXNIPQ9H3M7 391 aa11.97□□□□□ -0.49
PTCH1-217ENST00000548420 IL1RAPQ9NPH3 570 aa11.97□□□□□ -0.49
PTCH1-217ENST00000548420 G6PC2Q9NQR9 355 aa11.97□□□□□ -0.49
PTCH1-217ENST00000548420 TAS2R1Q9NYW7 299 aa11.97□□□□□ -0.49
PTCH1-217ENST00000548420 ACTR3BQ9P1U1 418 aa11.97□□□□□ -0.49
PTCH1-217ENST00000548420 MOKQ9UQ07 419 aa11.97□□□□□ -0.49
PTCH1-217ENST00000548420 POFUT2Q9Y2G5 429 aa11.97□□□□□ -0.49
PTCH1-217ENST00000548420 FAM32AQ9Y421 112 aaKnown RBP11.97□□□□□ -0.49
PTCH1-217ENST00000548420 DNAH3Q8TD57 4116 aa11.96□□□□□ -0.49
PTCH1-217ENST00000548420 DNAJC9-AS1A6NH13 148 aa11.96□□□□□ -0.49
PTCH1-217ENST00000548420 EFCAB9A8MZ26 197 aa11.96□□□□□ -0.49
PTCH1-217ENST00000548420 LYNX1G3V0Z9 82 aa11.96□□□□□ -0.49
PTCH1-217ENST00000548420 WNT9BO14905 357 aa11.96□□□□□ -0.49
PTCH1-217ENST00000548420 DHHO43323 396 aa11.96□□□□□ -0.49
PTCH1-217ENST00000548420 PTP4A3O75365 173 aa11.96□□□□□ -0.49
PTCH1-217ENST00000548420 TRMUO75648 421 aaKnown RBP11.96□□□□□ -0.49
PTCH1-217ENST00000548420 IGHG1P01857 330 aa11.96□□□□□ -0.49
PTCH1-217ENST00000548420 QDPRP09417 244 aa11.96□□□□□ -0.49
PTCH1-217ENST00000548420 CECR9P0C854 216 aa11.96□□□□□ -0.49
PTCH1-217ENST00000548420 LYNX1P0DP58 116 aa11.96□□□□□ -0.49
PTCH1-217ENST00000548420 DAOP14920 347 aa11.96□□□□□ -0.49
PTCH1-217ENST00000548420 ACADSP16219 412 aa11.96□□□□□ -0.49
PTCH1-217ENST00000548420 ZNF26P17031 533 aaPredicted RBP11.96□□□□□ -0.49
PTCH1-217ENST00000548420 OMGP23515 440 aa11.96□□□□□ -0.49
PTCH1-217ENST00000548420 ARR3P36575 388 aa11.96□□□□□ -0.49
PTCH1-217ENST00000548420 DAP3P51398 398 aaKnown RBP11.96□□□□□ -0.49
PTCH1-217ENST00000548420 TUBA1BP68363 451 aa11.96□□□□□ -0.49
PTCH1-217ENST00000548420 TUBA4AP68366 448 aa11.96□□□□□ -0.49
PTCH1-217ENST00000548420 MXRA7P84157 204 aa11.96□□□□□ -0.49
PTCH1-217ENST00000548420 NRN1LQ496H8 165 aa11.96□□□□□ -0.49
PTCH1-217ENST00000548420 ALG10Q5BKT4 473 aa11.96□□□□□ -0.49
PTCH1-217ENST00000548420 KPRPQ5T749 579 aaPredicted RBP11.96□□□□□ -0.49
PTCH1-217ENST00000548420 UGT2A3Q6UWM9 527 aa11.96□□□□□ -0.49
PTCH1-217ENST00000548420 ZNF813Q6ZN06 617 aa11.96□□□□□ -0.49
PTCH1-217ENST00000548420 TUBA1AQ71U36 451 aa11.96□□□□□ -0.49
PTCH1-217ENST00000548420 HDDC2Q7Z4H3 204 aa11.96□□□□□ -0.49
PTCH1-217ENST00000548420 OAFQ86UD1 273 aa11.96□□□□□ -0.49
PTCH1-217ENST00000548420 CDK20Q8IZL9 346 aa11.96□□□□□ -0.49
PTCH1-217ENST00000548420 CLDND2Q8NHS1 167 aa11.96□□□□□ -0.49
PTCH1-217ENST00000548420 BCAS4Q8TDM0 211 aa11.96□□□□□ -0.49
PTCH1-217ENST00000548420 DVL3Q92997 716 aaPredicted RBP11.96□□□□□ -0.49
PTCH1-217ENST00000548420 MCHR2Q969V1 340 aa11.96□□□□□ -0.49
PTCH1-217ENST00000548420 DENND2DQ9H6A0 471 aaPredicted RBP11.96□□□□□ -0.49
PTCH1-217ENST00000548420 STX18Q9P2W9 335 aaKnown RBP11.96□□□□□ -0.49
PTCH1-217ENST00000548420 TRBV4-1A0A0J9YWV2 114 aa11.95□□□□□ -0.5
PTCH1-217ENST00000548420 hCG_2039718K7EN88 272 aa11.95□□□□□ -0.5
PTCH1-217ENST00000548420 M0QZ24 198 aa11.95□□□□□ -0.5
PTCH1-217ENST00000548420 MGRN1O60291 552 aa11.95□□□□□ -0.5
PTCH1-217ENST00000548420 SEC14L2O76054 403 aa11.95□□□□□ -0.5
PTCH1-217ENST00000548420 DIRAS1O95057 198 aa11.95□□□□□ -0.5
PTCH1-217ENST00000548420 TSPAN15O95858 294 aa11.95□□□□□ -0.5
PTCH1-217ENST00000548420 PNPP00491 289 aa11.95□□□□□ -0.5
PTCH1-217ENST00000548420 SAGP10523 405 aaPredicted RBP11.95□□□□□ -0.5
PTCH1-217ENST00000548420 OMPP47874 163 aa11.95□□□□□ -0.5
PTCH1-217ENST00000548420 HMGA2P52926 109 aa11.95□□□□□ -0.5
PTCH1-217ENST00000548420 RPL27P61353 136 aaKnown RBP11.95□□□□□ -0.5
PTCH1-217ENST00000548420 MS4A2Q01362 244 aa11.95□□□□□ -0.5
PTCH1-217ENST00000548420 NAAAQ02083 359 aa11.95□□□□□ -0.5
PTCH1-217ENST00000548420 TRIM25Q14258 630 aaKnown RBP11.95□□□□□ -0.5
PTCH1-217ENST00000548420 SEC23BQ15437 767 aa11.95□□□□□ -0.5
PTCH1-217ENST00000548420 ZBED5Q49AG3 693 aa11.95□□□□□ -0.5
PTCH1-217ENST00000548420 C10orf128Q5T292 105 aa11.95□□□□□ -0.5
PTCH1-217ENST00000548420 RRM2BQ7LG56 351 aa11.95□□□□□ -0.5
PTCH1-217ENST00000548420 TRPM8Q7Z2W7 1104 aa11.95□□□□□ -0.5
PTCH1-217ENST00000548420 MDP1Q86V88 176 aa11.95□□□□□ -0.5
PTCH1-217ENST00000548420 MYPOPQ86VE0 399 aaPredicted RBP11.95□□□□□ -0.5
PTCH1-217ENST00000548420 SLC22A24Q8N4F4 322 aa11.95□□□□□ -0.5
PTCH1-217ENST00000548420 IL17RDQ8NFM7 739 aa11.95□□□□□ -0.5
PTCH1-217ENST00000548420 OR51A7Q8NH64 312 aa11.95□□□□□ -0.5
PTCH1-217ENST00000548420 MRAPQ8TCY5 172 aa11.95□□□□□ -0.5
PTCH1-217ENST00000548420 HDAC2Q92769 488 aaKnown RBP11.95□□□□□ -0.5
PTCH1-217ENST00000548420 ZNF347Q96SE7 839 aa11.95□□□□□ -0.5
PTCH1-217ENST00000548420 MUC13Q9H3R2 512 aa11.95□□□□□ -0.5
PTCH1-217ENST00000548420 SEC61A2Q9H9S3 476 aa11.95□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 29.1 ms