RNA–Protein interactions for RNA: ENST00000547063.5

TRAFD1-203, Transcript of TRAF-type zinc finger domain containing 1, humanhuman

TSL 3

Gene TRAFD1, Length 867 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAFD1-203ENST00000547063 A0A087WXM4 84 aa13.94□□□□□ -0.18
TRAFD1-203ENST00000547063 TVP23AA6NH52 213 aa13.94□□□□□ -0.18
TRAFD1-203ENST00000547063 ZNF593O00488 134 aaPredicted RBP13.94□□□□□ -0.18
TRAFD1-203ENST00000547063 TFP02787 698 aa13.94□□□□□ -0.18
TRAFD1-203ENST00000547063 OR8G3PP0DMU2 310 aa13.94□□□□□ -0.18
TRAFD1-203ENST00000547063 EDNRAP25101 427 aa13.94□□□□□ -0.18
TRAFD1-203ENST00000547063 MRPL49Q13405 166 aaKnown RBP13.94□□□□□ -0.18
TRAFD1-203ENST00000547063 SGCAQ16586 387 aa13.94□□□□□ -0.18
TRAFD1-203ENST00000547063 FAM27BQ5VT28 67 aa13.94□□□□□ -0.18
TRAFD1-203ENST00000547063 B3GLCTQ6Y288 498 aa13.94□□□□□ -0.18
TRAFD1-203ENST00000547063 DPPA2Q7Z7J5 298 aa13.94□□□□□ -0.18
TRAFD1-203ENST00000547063 MRGPRGQ86SM5 289 aa13.94□□□□□ -0.18
TRAFD1-203ENST00000547063 SLC35F2Q8IXU6 374 aa13.94□□□□□ -0.18
TRAFD1-203ENST00000547063 SVOPQ8N4V2 548 aa13.94□□□□□ -0.18
TRAFD1-203ENST00000547063 TSPAN14Q8NG11 270 aa13.94□□□□□ -0.18
TRAFD1-203ENST00000547063 OR52I1Q8NGK6 324 aa13.94□□□□□ -0.18
TRAFD1-203ENST00000547063 OR6N2Q8NGY6 317 aa13.94□□□□□ -0.18
TRAFD1-203ENST00000547063 ASB5Q8WWX0 329 aa13.94□□□□□ -0.18
TRAFD1-203ENST00000547063 CCDC90BQ9GZT6 254 aa13.94□□□□□ -0.18
TRAFD1-203ENST00000547063 WDR76Q9H967 626 aa13.94□□□□□ -0.18
TRAFD1-203ENST00000547063 COQ3Q9NZJ6 369 aa13.94□□□□□ -0.18
TRAFD1-203ENST00000547063 POLR1DQ9Y2S0 133 aa13.94□□□□□ -0.18
TRAFD1-203ENST00000547063 DAPL1A0PJW8 107 aa13.93□□□□□ -0.18
TRAFD1-203ENST00000547063 C12orf71A8MTZ7 269 aa13.93□□□□□ -0.18
TRAFD1-203ENST00000547063 ZNF670-ZNF695F2Z2N8 137 aa13.93□□□□□ -0.18
TRAFD1-203ENST00000547063 SELENOFO60613 162 aa13.93□□□□□ -0.18
TRAFD1-203ENST00000547063 IGHA1P01876 353 aa13.93□□□□□ -0.18
TRAFD1-203ENST00000547063 RPSAP08865 295 aaKnown RBP13.93□□□□□ -0.18
TRAFD1-203ENST00000547063 MRPL3P09001 348 aaKnown RBP13.93□□□□□ -0.18
TRAFD1-203ENST00000547063 BMP5P22003 454 aa13.93□□□□□ -0.18
TRAFD1-203ENST00000547063 CDAP32320 146 aa13.93□□□□□ -0.18
TRAFD1-203ENST00000547063 NAA10P41227 235 aaPredicted RBP13.93□□□□□ -0.18
TRAFD1-203ENST00000547063 PCBD1P61457 104 aa13.93□□□□□ -0.18
TRAFD1-203ENST00000547063 ARF1P84077 181 aaKnown RBP13.93□□□□□ -0.18
TRAFD1-203ENST00000547063 PCK2Q16822 640 aa13.93□□□□□ -0.18
TRAFD1-203ENST00000547063 RNLSQ5VYX0 342 aa13.93□□□□□ -0.18
TRAFD1-203ENST00000547063 OR7E24Q6IFN5 339 aa13.93□□□□□ -0.18
TRAFD1-203ENST00000547063 ANKRD16Q6P6B7 361 aa13.93□□□□□ -0.18
TRAFD1-203ENST00000547063 ZNF773Q6PK81 442 aa13.93□□□□□ -0.18
TRAFD1-203ENST00000547063 ZNF813Q6ZN06 617 aa13.93□□□□□ -0.18
TRAFD1-203ENST00000547063 LINGO2Q7L985 606 aa13.93□□□□□ -0.18
TRAFD1-203ENST00000547063 EGFL6Q8IUX8 553 aa13.93□□□□□ -0.18
TRAFD1-203ENST00000547063 CCDC36Q8IYA8 594 aa13.93□□□□□ -0.18
TRAFD1-203ENST00000547063 ZNF843Q8N446 348 aa13.93□□□□□ -0.18
TRAFD1-203ENST00000547063 ZNF610Q8N9Z0 462 aa13.93□□□□□ -0.18
TRAFD1-203ENST00000547063 C1orf162Q8NEQ5 155 aaPredicted RBP13.93□□□□□ -0.18
TRAFD1-203ENST00000547063 OR10H4Q8NGA5 316 aa13.93□□□□□ -0.18
TRAFD1-203ENST00000547063 OR4F15Q8NGB8 312 aa13.93□□□□□ -0.18
TRAFD1-203ENST00000547063 OR2AJ1Q8NGZ0 328 aa13.93□□□□□ -0.18
TRAFD1-203ENST00000547063 ASB17Q8WXJ9 295 aa13.93□□□□□ -0.18
TRAFD1-203ENST00000547063 C11orf40Q8WZ69 217 aa13.93□□□□□ -0.18
TRAFD1-203ENST00000547063 CDCA4Q9BXL8 241 aa13.93□□□□□ -0.18
TRAFD1-203ENST00000547063 VCX3AQ9NNX9 186 aa13.93□□□□□ -0.18
TRAFD1-203ENST00000547063 MRPL22Q9NWU5 206 aaKnown RBP13.93□□□□□ -0.18
TRAFD1-203ENST00000547063 ERVK-18Q9QC07 812 aa13.93□□□□□ -0.18
TRAFD1-203ENST00000547063 LAMP5Q9UJQ1 280 aa13.93□□□□□ -0.18
TRAFD1-203ENST00000547063 ERGIC3Q9Y282 383 aa13.93□□□□□ -0.18
TRAFD1-203ENST00000547063 FREM1Q5H8C1 2179 aa13.93□□□□□ -0.18
TRAFD1-203ENST00000547063 J3QRE1 110 aa13.92□□□□□ -0.18
TRAFD1-203ENST00000547063 CST2P09228 141 aa13.92□□□□□ -0.18
TRAFD1-203ENST00000547063 HOXB1P14653 301 aaPredicted RBP13.92□□□□□ -0.18
TRAFD1-203ENST00000547063 CAPZA2P47755 286 aa13.92□□□□□ -0.18
TRAFD1-203ENST00000547063 AQP6Q13520 282 aa13.92□□□□□ -0.18
TRAFD1-203ENST00000547063 C4orf17Q53FE4 359 aa13.92□□□□□ -0.18
TRAFD1-203ENST00000547063 C1QTNF12Q5T7M4 302 aa13.92□□□□□ -0.18
TRAFD1-203ENST00000547063 SLC18B1Q6NT16 456 aa13.92□□□□□ -0.18
TRAFD1-203ENST00000547063 DPY19L4Q7Z388 723 aa13.92□□□□□ -0.18
TRAFD1-203ENST00000547063 SYT9Q86SS6 491 aa13.92□□□□□ -0.18
TRAFD1-203ENST00000547063 CDC20BQ86Y33 519 aa13.92□□□□□ -0.18
TRAFD1-203ENST00000547063 SLC22A24Q8N4F4 322 aa13.92□□□□□ -0.18
TRAFD1-203ENST00000547063 OTOSQ8NHW6 89 aa13.92□□□□□ -0.18
TRAFD1-203ENST00000547063 PRR7Q8TB68 274 aa13.92□□□□□ -0.18
TRAFD1-203ENST00000547063 NABP1Q96AH0 204 aa13.92□□□□□ -0.18
TRAFD1-203ENST00000547063 ZNF837Q96EG3 531 aaPredicted RBP13.92□□□□□ -0.18
TRAFD1-203ENST00000547063 FOXN4Q96NZ1 517 aa13.92□□□□□ -0.18
TRAFD1-203ENST00000547063 RHNO1Q9BSD3 238 aa13.92□□□□□ -0.18
TRAFD1-203ENST00000547063 HDHD5Q9BXW7 423 aa13.92□□□□□ -0.18
TRAFD1-203ENST00000547063 OPN3Q9H1Y3 402 aaPredicted RBP13.92□□□□□ -0.18
TRAFD1-203ENST00000547063 PAK1IP1Q9NWT1 392 aaPredicted RBP13.92□□□□□ -0.18
TRAFD1-203ENST00000547063 GALNT8Q9NY28 637 aa13.92□□□□□ -0.18
TRAFD1-203ENST00000547063 CIB4A0PJX0 185 aa13.91□□□□□ -0.18
TRAFD1-203ENST00000547063 MYL12BO14950 172 aa13.91□□□□□ -0.18
TRAFD1-203ENST00000547063 APOL3O95236 402 aa13.91□□□□□ -0.18
TRAFD1-203ENST00000547063 MPZL1O95297 269 aa13.91□□□□□ -0.18
TRAFD1-203ENST00000547063 GPANK1O95872 356 aa13.91□□□□□ -0.18
TRAFD1-203ENST00000547063 ITGA5P08648 1049 aa13.91□□□□□ -0.18
TRAFD1-203ENST00000547063 SPARCP09486 303 aa13.91□□□□□ -0.18
TRAFD1-203ENST00000547063 B4GALT1P15291 398 aa13.91□□□□□ -0.18
TRAFD1-203ENST00000547063 COX5AP20674 150 aa13.91□□□□□ -0.18
TRAFD1-203ENST00000547063 CHRNB4P30926 498 aa13.91□□□□□ -0.18
TRAFD1-203ENST00000547063 HOXC12P31275 282 aa13.91□□□□□ -0.18
TRAFD1-203ENST00000547063 ACTA2P62736 377 aa13.91□□□□□ -0.18
TRAFD1-203ENST00000547063 ACTG2P63267 376 aa13.91□□□□□ -0.18
TRAFD1-203ENST00000547063 TUBA4AP68366 448 aa13.91□□□□□ -0.18
TRAFD1-203ENST00000547063 MVKQ03426 396 aa13.91□□□□□ -0.18
TRAFD1-203ENST00000547063 DBPQ10586 325 aaPredicted RBP13.91□□□□□ -0.18
TRAFD1-203ENST00000547063 GALEQ14376 348 aa13.91□□□□□ -0.18
TRAFD1-203ENST00000547063 MEP1BQ16820 701 aa13.91□□□□□ -0.18
TRAFD1-203ENST00000547063 SLC25A35Q3KQZ1 300 aa13.91□□□□□ -0.18
TRAFD1-203ENST00000547063 SLC36A2Q495M3 483 aa13.91□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 42 ms