RNA–Protein interactions for RNA: ENST00000546869.1

DDX54-203, Transcript of DEAD-box helicase 54, humanhuman

TSL 3

Gene DDX54, Length 420 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX54-203ENST00000546869 MBD6Q96DN6 1003 aa12.57□□□□□ -0.4
DDX54-203ENST00000546869 PKP2Q99959 881 aa12.57□□□□□ -0.4
DDX54-203ENST00000546869 RBM4Q9BWF3 364 aaKnown RBP12.57□□□□□ -0.4
DDX54-203ENST00000546869 NMNAT2Q9BZQ4 307 aa12.57□□□□□ -0.4
DDX54-203ENST00000546869 SEMA6AQ9H2E6 1030 aa12.57□□□□□ -0.4
DDX54-203ENST00000546869 NOX3Q9HBY0 568 aa12.57□□□□□ -0.4
DDX54-203ENST00000546869 SLC25A19Q9HC21 320 aa12.57□□□□□ -0.4
DDX54-203ENST00000546869 CISD1Q9NZ45 108 aaKnown RBP12.57□□□□□ -0.4
DDX54-203ENST00000546869 KIF17Q9P2E2 1029 aa12.57□□□□□ -0.4
DDX54-203ENST00000546869 OAZ3Q9UMX2 235 aa12.57□□□□□ -0.4
DDX54-203ENST00000546869 TIMM10BQ9Y5J6 103 aa12.57□□□□□ -0.4
DDX54-203ENST00000546869 A0A1W2PPL8 197 aa12.56□□□□□ -0.4
DDX54-203ENST00000546869 C12orf71A8MTZ7 269 aa12.56□□□□□ -0.4
DDX54-203ENST00000546869 RAF1P04049 648 aa12.56□□□□□ -0.4
DDX54-203ENST00000546869 SCG5P05408 212 aa12.56□□□□□ -0.4
DDX54-203ENST00000546869 DANCRP0C864 163 aa12.56□□□□□ -0.4
DDX54-203ENST00000546869 ZNF35P13682 527 aa12.56□□□□□ -0.4
DDX54-203ENST00000546869 IDH3GP51553 393 aaPredicted RBP12.56□□□□□ -0.4
DDX54-203ENST00000546869 PPP2R2BQ00005 443 aa12.56□□□□□ -0.4
DDX54-203ENST00000546869 PLP2Q04941 152 aa12.56□□□□□ -0.4
DDX54-203ENST00000546869 ENDOGQ14249 297 aaKnown RBP12.56□□□□□ -0.4
DDX54-203ENST00000546869 ZNF544Q6NX49 715 aa12.56□□□□□ -0.4
DDX54-203ENST00000546869 SLC22A25Q6T423 547 aa12.56□□□□□ -0.4
DDX54-203ENST00000546869 CDH24Q86UP0 819 aa12.56□□□□□ -0.4
DDX54-203ENST00000546869 ZNF584Q8IVC4 421 aa12.56□□□□□ -0.4
DDX54-203ENST00000546869 LRRC18Q8N456 261 aa12.56□□□□□ -0.4
DDX54-203ENST00000546869 SLC37A3Q8NCC5 494 aa12.56□□□□□ -0.4
DDX54-203ENST00000546869 SDR9C7Q8NEX9 313 aa12.56□□□□□ -0.4
DDX54-203ENST00000546869 NUP37Q8NFH4 326 aa12.56□□□□□ -0.4
DDX54-203ENST00000546869 KBTBD8Q8NFY9 601 aa12.56□□□□□ -0.4
DDX54-203ENST00000546869 OR2T4Q8NH00 348 aa12.56□□□□□ -0.4
DDX54-203ENST00000546869 PIGTQ969N2 578 aa12.56□□□□□ -0.4
DDX54-203ENST00000546869 FBXO17Q96EF6 278 aa12.56□□□□□ -0.4
DDX54-203ENST00000546869 TSSK2Q96PF2 358 aa12.56□□□□□ -0.4
DDX54-203ENST00000546869 DHRS9Q9BPW9 319 aa12.56□□□□□ -0.4
DDX54-203ENST00000546869 KCNS3Q9BQ31 491 aa12.56□□□□□ -0.4
DDX54-203ENST00000546869 ZNF416Q9BWM5 594 aa12.56□□□□□ -0.4
DDX54-203ENST00000546869 TEX12Q9BXU0 123 aa12.56□□□□□ -0.4
DDX54-203ENST00000546869 LIME1Q9H400 295 aa12.56□□□□□ -0.4
DDX54-203ENST00000546869 RNF121Q9H920 327 aa12.56□□□□□ -0.4
DDX54-203ENST00000546869 SRA1Q9HD15 236 aaKnown RBP12.56□□□□□ -0.4
DDX54-203ENST00000546869 CCNB1IP1Q9NPC3 277 aa12.56□□□□□ -0.4
DDX54-203ENST00000546869 RPRD1BQ9NQG5 326 aaKnown RBP12.56□□□□□ -0.4
DDX54-203ENST00000546869 KRT84Q9NSB2 600 aa12.56□□□□□ -0.4
DDX54-203ENST00000546869 IGHV2OR16-5A0A0B4J2B6 119 aa12.55□□□□□ -0.4
DDX54-203ENST00000546869 RIIAD1A6NNX1 92 aa12.55□□□□□ -0.4
DDX54-203ENST00000546869 E7EQL1 145 aa12.55□□□□□ -0.4
DDX54-203ENST00000546869 ATE1O95260 518 aa12.55□□□□□ -0.4
DDX54-203ENST00000546869 SNAP29O95721 258 aa12.55□□□□□ -0.4
DDX54-203ENST00000546869 CELA3BP08861 270 aa12.55□□□□□ -0.4
DDX54-203ENST00000546869 PATE4P0C8F1 98 aa12.55□□□□□ -0.4
DDX54-203ENST00000546869 GAAP10253 952 aa12.55□□□□□ -0.4
DDX54-203ENST00000546869 ZNF32P17041 273 aa12.55□□□□□ -0.4
DDX54-203ENST00000546869 CD53P19397 219 aa12.55□□□□□ -0.4
DDX54-203ENST00000546869 POU1F1P28069 291 aa12.55□□□□□ -0.4
DDX54-203ENST00000546869 CALCRP30988 508 aa12.55□□□□□ -0.4
DDX54-203ENST00000546869 BLVRAP53004 296 aa12.55□□□□□ -0.4
DDX54-203ENST00000546869 HSF2Q03933 536 aa12.55□□□□□ -0.4
DDX54-203ENST00000546869 NPRL3Q12980 569 aa12.55□□□□□ -0.4
DDX54-203ENST00000546869 RAB39AQ14964 217 aa12.55□□□□□ -0.4
DDX54-203ENST00000546869 ACSM5Q6NUN0 579 aa12.55□□□□□ -0.4
DDX54-203ENST00000546869 MYPOPQ86VE0 399 aaPredicted RBP12.55□□□□□ -0.4
DDX54-203ENST00000546869 ALDH16A1Q8IZ83 802 aa12.55□□□□□ -0.4
DDX54-203ENST00000546869 OR1J2Q8NGS2 313 aa12.55□□□□□ -0.4
DDX54-203ENST00000546869 HTRA1Q92743 480 aa12.55□□□□□ -0.4
DDX54-203ENST00000546869 RBM4BQ9BQ04 359 aaKnown RBP12.55□□□□□ -0.4
DDX54-203ENST00000546869 FAIMQ9NVQ4 179 aa12.55□□□□□ -0.4
DDX54-203ENST00000546869 USE1Q9NZ43 259 aa12.55□□□□□ -0.4
DDX54-203ENST00000546869 TMEFF2Q9UIK5 374 aaPredicted RBP12.55□□□□□ -0.4
DDX54-203ENST00000546869 KCNG2Q9UJ96 466 aa12.55□□□□□ -0.4
DDX54-203ENST00000546869 MOKQ9UQ07 419 aa12.55□□□□□ -0.4
DDX54-203ENST00000546869 PDZD2O15018 2839 aa12.54□□□□□ -0.4
DDX54-203ENST00000546869 HRNRQ86YZ3 2850 aaPredicted RBP12.54□□□□□ -0.4
DDX54-203ENST00000546869 TACC2O95359 2948 aa12.54□□□□□ -0.4
DDX54-203ENST00000546869 IQCMA0A1B0GVH7 501 aa12.54□□□□□ -0.4
DDX54-203ENST00000546869 ATP6V1G2-DDX39BF2Z307 99 aa12.54□□□□□ -0.4
DDX54-203ENST00000546869 SURF4O15260 269 aa12.54□□□□□ -0.4
DDX54-203ENST00000546869 COX5BP10606 129 aa12.54□□□□□ -0.4
DDX54-203ENST00000546869 ZNF3P17036 446 aa12.54□□□□□ -0.4
DDX54-203ENST00000546869 NR4A1P22736 598 aa12.54□□□□□ -0.4
DDX54-203ENST00000546869 DNASE1P24855 282 aa12.54□□□□□ -0.4
DDX54-203ENST00000546869 APOBEC3AP31941 199 aaPredicted RBP12.54□□□□□ -0.4
DDX54-203ENST00000546869 CDH11P55287 796 aa12.54□□□□□ -0.4
DDX54-203ENST00000546869 HIST1H3AP68431 136 aa12.54□□□□□ -0.4
DDX54-203ENST00000546869 PSG4Q00888 419 aa12.54□□□□□ -0.4
DDX54-203ENST00000546869 SPOCK1Q08629 439 aa12.54□□□□□ -0.4
DDX54-203ENST00000546869 AQP6Q13520 282 aa12.54□□□□□ -0.4
DDX54-203ENST00000546869 KEAP1Q14145 624 aa12.54□□□□□ -0.4
DDX54-203ENST00000546869 CRMP1Q14194 572 aa12.54□□□□□ -0.4
DDX54-203ENST00000546869 PTGES3Q15185 160 aaKnown RBP12.54□□□□□ -0.4
DDX54-203ENST00000546869 PABPC1L2AQ5JQF8 200 aa12.54□□□□□ -0.4
DDX54-203ENST00000546869 HIST2H3PS2Q5TEC6 136 aa12.54□□□□□ -0.4
DDX54-203ENST00000546869 HIST2H3AQ71DI3 136 aa12.54□□□□□ -0.4
DDX54-203ENST00000546869 DTX2Q86UW9 622 aa12.54□□□□□ -0.4
DDX54-203ENST00000546869 PQLC1Q8N2U9 271 aa12.54□□□□□ -0.4
DDX54-203ENST00000546869 SLC26A10Q8NG04 563 aa12.54□□□□□ -0.4
DDX54-203ENST00000546869 SMAP2Q8WU79 429 aaPredicted RBP12.54□□□□□ -0.4
DDX54-203ENST00000546869 C11orf40Q8WZ69 217 aa12.54□□□□□ -0.4
DDX54-203ENST00000546869 NRGNQ92686 78 aa12.54□□□□□ -0.4
DDX54-203ENST00000546869 PTP4A1Q93096 173 aa12.54□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 34.7 ms