RNA–Protein interactions for RNA: ENST00000546534.1

SCAF11-208, Transcript of SR-related CTD associated factor 11, humanhuman

TSL 3

Gene SCAF11, Length 705 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF11-208ENST00000546534 SRRM5B3KS81 715 aa10.68□□□□□ -0.7
SCAF11-208ENST00000546534 C5orf58C9J3I9 102 aa10.68□□□□□ -0.7
SCAF11-208ENST00000546534 SDHDO14521 159 aa10.68□□□□□ -0.7
SCAF11-208ENST00000546534 TPST2O60704 377 aa10.68□□□□□ -0.7
SCAF11-208ENST00000546534 OR6A2O95222 327 aa10.68□□□□□ -0.7
SCAF11-208ENST00000546534 TGDSO95455 350 aa10.68□□□□□ -0.7
SCAF11-208ENST00000546534 TSPAN15O95858 294 aa10.68□□□□□ -0.7
SCAF11-208ENST00000546534 MT-ATP6P00846 226 aa10.68□□□□□ -0.7
SCAF11-208ENST00000546534 ETS2P15036 469 aa10.68□□□□□ -0.7
SCAF11-208ENST00000546534 LIPAP38571 399 aa10.68□□□□□ -0.7
SCAF11-208ENST00000546534 SLC1A6P48664 564 aa10.68□□□□□ -0.7
SCAF11-208ENST00000546534 NCALDP61601 193 aa10.68□□□□□ -0.7
SCAF11-208ENST00000546534 TAF9Q16594 264 aa10.68□□□□□ -0.7
SCAF11-208ENST00000546534 CEP85LQ5SZL2 805 aa10.68□□□□□ -0.7
SCAF11-208ENST00000546534 BRD3OSQ6XYD6 125 aa10.68□□□□□ -0.7
SCAF11-208ENST00000546534 RFPL4BQ6ZWI9 263 aa10.68□□□□□ -0.7
SCAF11-208ENST00000546534 EIF1ADQ8N9N8 165 aaKnown RBP10.68□□□□□ -0.7
SCAF11-208ENST00000546534 OR10S1Q8NGN2 331 aa10.68□□□□□ -0.7
SCAF11-208ENST00000546534 MCHR2Q969V1 340 aa10.68□□□□□ -0.7
SCAF11-208ENST00000546534 ARHGDIGQ99819 225 aa10.68□□□□□ -0.7
SCAF11-208ENST00000546534 CHIAQ9BZP6 476 aa10.68□□□□□ -0.7
SCAF11-208ENST00000546534 CGGBP1Q9UFW8 167 aaPredicted RBP10.68□□□□□ -0.7
SCAF11-208ENST00000546534 HAO1Q9UJM8 370 aa10.68□□□□□ -0.7
SCAF11-208ENST00000546534 SLC22A31A6NKX4 558 aa10.67□□□□□ -0.7
SCAF11-208ENST00000546534 CEACAM18A8MTB9 384 aa10.67□□□□□ -0.7
SCAF11-208ENST00000546534 RNF13O43567 381 aa10.67□□□□□ -0.7
SCAF11-208ENST00000546534 WNT2P09544 360 aa10.67□□□□□ -0.7
SCAF11-208ENST00000546534 ZNF84P51523 738 aa10.67□□□□□ -0.7
SCAF11-208ENST00000546534 RGS8P57771 180 aaPredicted RBP10.67□□□□□ -0.7
SCAF11-208ENST00000546534 PPP1CBP62140 327 aa10.67□□□□□ -0.7
SCAF11-208ENST00000546534 CDK5R2Q13319 367 aa10.67□□□□□ -0.7
SCAF11-208ENST00000546534 HLXQ14774 488 aaPredicted RBP10.67□□□□□ -0.7
SCAF11-208ENST00000546534 HIST3H3Q16695 136 aa10.67□□□□□ -0.7
SCAF11-208ENST00000546534 ZMAT1Q5H9K5 638 aa10.67□□□□□ -0.7
SCAF11-208ENST00000546534 C6orf10Q5SRN2 563 aa10.67□□□□□ -0.7
SCAF11-208ENST00000546534 ZNF774Q6NX45 483 aa10.67□□□□□ -0.7
SCAF11-208ENST00000546534 BTNL3Q6UXE8 466 aa10.67□□□□□ -0.7
SCAF11-208ENST00000546534 LRRN1Q6UXK5 716 aa10.67□□□□□ -0.7
SCAF11-208ENST00000546534 POU5F2Q8N7G0 328 aa10.67□□□□□ -0.7
SCAF11-208ENST00000546534 HIPK4Q8NE63 616 aa10.67□□□□□ -0.7
SCAF11-208ENST00000546534 AKR7LQ8NHP1 331 aa10.67□□□□□ -0.7
SCAF11-208ENST00000546534 NFKBIDQ8NI38 313 aa10.67□□□□□ -0.7
SCAF11-208ENST00000546534 ABHD4Q8TB40 342 aa10.67□□□□□ -0.7
SCAF11-208ENST00000546534 RAB40AQ8WXH6 277 aa10.67□□□□□ -0.7
SCAF11-208ENST00000546534 DACT3Q96B18 629 aaPredicted RBP10.67□□□□□ -0.7
SCAF11-208ENST00000546534 ITCHQ96J02 903 aa10.67□□□□□ -0.7
SCAF11-208ENST00000546534 SAMD8Q96LT4 415 aa10.67□□□□□ -0.7
SCAF11-208ENST00000546534 SIGLEC11Q96RL6 698 aa10.67□□□□□ -0.7
SCAF11-208ENST00000546534 ZNF347Q96SE7 839 aa10.67□□□□□ -0.7
SCAF11-208ENST00000546534 SLC19A3Q9BZV2 496 aa10.67□□□□□ -0.7
SCAF11-208ENST00000546534 WDR55Q9H6Y2 383 aaPredicted RBP10.67□□□□□ -0.7
SCAF11-208ENST00000546534 RMND5AQ9H871 391 aa10.67□□□□□ -0.7
SCAF11-208ENST00000546534 NANOGQ9H9S0 305 aa10.67□□□□□ -0.7
SCAF11-208ENST00000546534 CCNB1IP1Q9NPC3 277 aa10.67□□□□□ -0.7
SCAF11-208ENST00000546534 LRCH1Q9Y2L9 728 aa10.67□□□□□ -0.7
SCAF11-208ENST00000546534 RNF114Q9Y508 228 aa10.67□□□□□ -0.7
SCAF11-208ENST00000546534 IGHV2-70DA0A0C4DH43 119 aa10.66□□□□□ -0.7
SCAF11-208ENST00000546534 CLIC1O00299 241 aa10.66□□□□□ -0.7
SCAF11-208ENST00000546534 BIRC5O15392 142 aa10.66□□□□□ -0.7
SCAF11-208ENST00000546534 MGRN1O60291 552 aa10.66□□□□□ -0.7
SCAF11-208ENST00000546534 SLC22A3O75751 556 aa10.66□□□□□ -0.7
SCAF11-208ENST00000546534 CH25HO95992 272 aa10.66□□□□□ -0.7
SCAF11-208ENST00000546534 IGHG1P01857 330 aa10.66□□□□□ -0.7
SCAF11-208ENST00000546534 ZNF32P17041 273 aa10.66□□□□□ -0.7
SCAF11-208ENST00000546534 CD33P20138 364 aa10.66□□□□□ -0.7
SCAF11-208ENST00000546534 EPHA3P29320 983 aa10.66□□□□□ -0.7
SCAF11-208ENST00000546534 CDAP32320 146 aa10.66□□□□□ -0.7
SCAF11-208ENST00000546534 MDH2P40926 338 aaKnown RBP10.66□□□□□ -0.7
SCAF11-208ENST00000546534 GDI2P50395 445 aaKnown RBP10.66□□□□□ -0.7
SCAF11-208ENST00000546534 CLRN1P58418 232 aa10.66□□□□□ -0.7
SCAF11-208ENST00000546534 ZNF74Q16587 644 aa10.66□□□□□ -0.7
SCAF11-208ENST00000546534 MTX3Q5HYI7 312 aa10.66□□□□□ -0.7
SCAF11-208ENST00000546534 FAM205BPQ63HN1 556 aa10.66□□□□□ -0.7
SCAF11-208ENST00000546534 UNQ6126/PRO20091Q6UXV3 157 aa10.66□□□□□ -0.7
SCAF11-208ENST00000546534 LINC00114Q6XXX2 140 aa10.66□□□□□ -0.7
SCAF11-208ENST00000546534 Q6YL49 198 aa10.66□□□□□ -0.7
SCAF11-208ENST00000546534 KIRREL3Q8IZU9 778 aa10.66□□□□□ -0.7
SCAF11-208ENST00000546534 FAM110DQ8TAY7 271 aaPredicted RBP10.66□□□□□ -0.7
SCAF11-208ENST00000546534 SSBP3Q9BWW4 388 aaPredicted RBP10.66□□□□□ -0.7
SCAF11-208ENST00000546534 MRPL13Q9BYD1 178 aaKnown RBP10.66□□□□□ -0.7
SCAF11-208ENST00000546534 KCNN2Q9H2S1 579 aa10.66□□□□□ -0.7
SCAF11-208ENST00000546534 SIAEQ9HAT2 523 aa10.66□□□□□ -0.7
SCAF11-208ENST00000546534 NOX4Q9NPH5 578 aa10.66□□□□□ -0.7
SCAF11-208ENST00000546534 H3BSA7 217 aa10.65□□□□□ -0.7
SCAF11-208ENST00000546534 TIMM8AO60220 97 aaPredicted RBP10.65□□□□□ -0.7
SCAF11-208ENST00000546534 THRBP10828 461 aa10.65□□□□□ -0.7
SCAF11-208ENST00000546534 TNFRSF1AP19438 455 aa10.65□□□□□ -0.7
SCAF11-208ENST00000546534 BGNP21810 368 aa10.65□□□□□ -0.7
SCAF11-208ENST00000546534 MRPS34P82930 218 aaKnown RBP10.65□□□□□ -0.7
SCAF11-208ENST00000546534 PSG4Q00888 419 aa10.65□□□□□ -0.7
SCAF11-208ENST00000546534 PSG7Q13046 419 aa10.65□□□□□ -0.7
SCAF11-208ENST00000546534 FADDQ13158 208 aa10.65□□□□□ -0.7
SCAF11-208ENST00000546534 PDCD1Q15116 288 aa10.65□□□□□ -0.7
SCAF11-208ENST00000546534 HHATQ5VTY9 493 aa10.65□□□□□ -0.7
SCAF11-208ENST00000546534 Q6ZR03 302 aa10.65□□□□□ -0.7
SCAF11-208ENST00000546534 MSANTD1Q6ZTZ1 278 aa10.65□□□□□ -0.7
SCAF11-208ENST00000546534 KRT73Q86Y46 540 aa10.65□□□□□ -0.7
SCAF11-208ENST00000546534 C1orf174Q8IYL3 243 aa10.65□□□□□ -0.7
SCAF11-208ENST00000546534 MUC20Q8N307 709 aaPredicted RBP10.65□□□□□ -0.7
SCAF11-208ENST00000546534 NOXO1Q8NFA2 376 aa10.65□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 44.8 ms