RNA–Protein interactions for RNA: ENST00000545889.5

CLIP1-218, Transcript of CAP-Gly domain containing linker protein 1, humanhuman

TSL 5 BASIC

Gene CLIP1, Length 4,633 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP1-218ENST00000545889 NMNAT1Q9HAN9 279 aaPredicted RBP7.86□□□□□ -1.15
CLIP1-218ENST00000545889 HIF1ANQ9NWT6 349 aa7.86□□□□□ -1.15
CLIP1-218ENST00000545889 AGAP14A8MT82 685 aa7.86□□□□□ -1.15
CLIP1-218ENST00000545889 EFSO43281 561 aa7.86□□□□□ -1.15
CLIP1-218ENST00000545889 EIF4E2O60573 245 aaKnown RBP7.86□□□□□ -1.15
CLIP1-218ENST00000545889 EML2O95834 649 aa7.86□□□□□ -1.15
CLIP1-218ENST00000545889 IFNA17P01571 189 aa7.86□□□□□ -1.15
CLIP1-218ENST00000545889 GPX3P22352 226 aa7.86□□□□□ -1.15
CLIP1-218ENST00000545889 AQP2P41181 271 aa7.86□□□□□ -1.15
CLIP1-218ENST00000545889 FABP6P51161 128 aa7.86□□□□□ -1.15
CLIP1-218ENST00000545889 TUSC1Q2TAM9 212 aa7.86□□□□□ -1.15
CLIP1-218ENST00000545889 EXOSC6Q5RKV6 272 aaKnown RBP7.86□□□□□ -1.15
CLIP1-218ENST00000545889 FAM69AQ5T7M9 428 aa7.86□□□□□ -1.15
CLIP1-218ENST00000545889 SLC48A1Q6P1K1 146 aa7.86□□□□□ -1.15
CLIP1-218ENST00000545889 B3GNT8Q7Z7M8 397 aa7.86□□□□□ -1.15
CLIP1-218ENST00000545889 MEX3DQ86XN8 651 aaKnown RBP7.86□□□□□ -1.15
CLIP1-218ENST00000545889 MORN4Q8NDC4 146 aa7.86□□□□□ -1.15
CLIP1-218ENST00000545889 ZNF300Q96RE9 604 aaPredicted RBP7.86□□□□□ -1.15
CLIP1-218ENST00000545889 MGLLQ99685 303 aa7.86□□□□□ -1.15
CLIP1-218ENST00000545889 C7orf50Q9BRJ6 194 aaKnown RBP7.86□□□□□ -1.15
CLIP1-218ENST00000545889 IL20Q9NYY1 176 aa7.86□□□□□ -1.15
CLIP1-218ENST00000545889 GPR45Q9Y5Y3 372 aa7.86□□□□□ -1.15
CLIP1-218ENST00000545889 A0A1W2PQL4 384 aaPredicted RBP7.85□□□□□ -1.15
CLIP1-218ENST00000545889 PRKRAO75569 313 aaKnown RBP7.85□□□□□ -1.15
CLIP1-218ENST00000545889 SIX6O95475 246 aa7.85□□□□□ -1.15
CLIP1-218ENST00000545889 IFNA2P01563 188 aa7.85□□□□□ -1.15
CLIP1-218ENST00000545889 CLEC3BP05452 202 aa7.85□□□□□ -1.15
CLIP1-218ENST00000545889 SERPINA2P20848 420 aa7.85□□□□□ -1.15
CLIP1-218ENST00000545889 PCGF2P35227 344 aa7.85□□□□□ -1.15
CLIP1-218ENST00000545889 SLC6A12P48065 614 aa7.85□□□□□ -1.15
CLIP1-218ENST00000545889 CXCR4P61073 352 aa7.85□□□□□ -1.15
CLIP1-218ENST00000545889 MC2RQ01718 297 aa7.85□□□□□ -1.15
CLIP1-218ENST00000545889 FCN2Q15485 313 aa7.85□□□□□ -1.15
CLIP1-218ENST00000545889 COL28A1Q2UY09 1125 aa7.85□□□□□ -1.15
CLIP1-218ENST00000545889 ARTNQ5T4W7 220 aa7.85□□□□□ -1.15
CLIP1-218ENST00000545889 ZNF695Q8IW36 515 aa7.85□□□□□ -1.15
CLIP1-218ENST00000545889 SLC43A2Q8N370 569 aa7.85□□□□□ -1.15
CLIP1-218ENST00000545889 BEST4Q8NFU0 473 aa7.85□□□□□ -1.15
CLIP1-218ENST00000545889 OR56B2PQ8NGI1 322 aa7.85□□□□□ -1.15
CLIP1-218ENST00000545889 CHAC2Q8WUX2 184 aa7.85□□□□□ -1.15
CLIP1-218ENST00000545889 MSI2Q96DH6 328 aaKnown RBP7.85□□□□□ -1.15
CLIP1-218ENST00000545889 LINC00615Q96LM1 132 aaPredicted RBP7.85□□□□□ -1.15
CLIP1-218ENST00000545889 SPIN2AQ99865 258 aa7.85□□□□□ -1.15
CLIP1-218ENST00000545889 SPIN2BQ9BPZ2 258 aa7.85□□□□□ -1.15
CLIP1-218ENST00000545889 NICN1Q9BSH3 213 aa7.85□□□□□ -1.15
CLIP1-218ENST00000545889 ST6GALNAC5Q9BVH7 336 aa7.85□□□□□ -1.15
CLIP1-218ENST00000545889 APMAPQ9HDC9 416 aa7.85□□□□□ -1.15
CLIP1-218ENST00000545889 GCM1Q9NP62 436 aa7.85□□□□□ -1.15
CLIP1-218ENST00000545889 TMEM100Q9NV29 134 aa7.85□□□□□ -1.15
CLIP1-218ENST00000545889 CHD5Q8TDI0 1954 aa7.85□□□□□ -1.15
CLIP1-218ENST00000545889 CD300LBA8K4G0 201 aa7.85□□□□□ -1.15
CLIP1-218ENST00000545889 PATE3B3GLJ2 98 aa7.85□□□□□ -1.15
CLIP1-218ENST00000545889 AKR7A3O95154 331 aa7.85□□□□□ -1.15
CLIP1-218ENST00000545889 IL1AP01583 271 aa7.85□□□□□ -1.15
CLIP1-218ENST00000545889 TK1P04183 234 aa7.85□□□□□ -1.15
CLIP1-218ENST00000545889 IGHV4-34P06331 123 aa7.85□□□□□ -1.15
CLIP1-218ENST00000545889 ACSM4P0C7M7 580 aa7.85□□□□□ -1.15
CLIP1-218ENST00000545889 ARSBP15848 533 aa7.85□□□□□ -1.15
CLIP1-218ENST00000545889 PTPN6P29350 595 aa7.85□□□□□ -1.15
CLIP1-218ENST00000545889 EIF2S3P41091 472 aaKnown RBP7.85□□□□□ -1.15
CLIP1-218ENST00000545889 LIM2P55344 173 aa7.85□□□□□ -1.15
CLIP1-218ENST00000545889 FAM53BQ14153 422 aa7.85□□□□□ -1.15
CLIP1-218ENST00000545889 COQ5Q5HYK3 327 aa7.85□□□□□ -1.15
CLIP1-218ENST00000545889 TCTN3Q6NUS6 607 aa7.85□□□□□ -1.15
CLIP1-218ENST00000545889 TMEM205Q6UW68 189 aa7.85□□□□□ -1.15
CLIP1-218ENST00000545889 RETREG3Q86VR2 466 aa7.85□□□□□ -1.15
CLIP1-218ENST00000545889 L3MBTL4Q8NA19 623 aa7.85□□□□□ -1.15
CLIP1-218ENST00000545889 UBTD2Q8WUN7 234 aa7.85□□□□□ -1.15
CLIP1-218ENST00000545889 TEX37Q96LM6 180 aa7.85□□□□□ -1.15
CLIP1-218ENST00000545889 C19orf43Q9BQ61 176 aa7.85□□□□□ -1.15
CLIP1-218ENST00000545889 TMEM43Q9BTV4 400 aa7.85□□□□□ -1.15
CLIP1-218ENST00000545889 BARHL1Q9BZE3 327 aa7.85□□□□□ -1.15
CLIP1-218ENST00000545889 SIDT1Q9NXL6 827 aaKnown RBP7.85□□□□□ -1.15
CLIP1-218ENST00000545889 FBXL2Q9UKC9 423 aa7.85□□□□□ -1.15
CLIP1-218ENST00000545889 CBY1Q9Y3M2 126 aa7.85□□□□□ -1.15
CLIP1-218ENST00000545889 PPM1DO15297 605 aa7.85□□□□□ -1.15
CLIP1-218ENST00000545889 LYRM1O43325 122 aa7.85□□□□□ -1.15
CLIP1-218ENST00000545889 LCMT2O60294 686 aaKnown RBP7.85□□□□□ -1.15
CLIP1-218ENST00000545889 RAF1P04049 648 aa7.85□□□□□ -1.15
CLIP1-218ENST00000545889 RNF224P0DH78 156 aa7.85□□□□□ -1.15
CLIP1-218ENST00000545889 TRAPPC2P0DI81 140 aa7.85□□□□□ -1.15
CLIP1-218ENST00000545889 TRAPPC2BP0DI82 140 aa7.85□□□□□ -1.15
CLIP1-218ENST00000545889 PRKAR1BP31321 381 aa7.85□□□□□ -1.15
CLIP1-218ENST00000545889 NXPH1P58417 271 aa7.85□□□□□ -1.15
CLIP1-218ENST00000545889 ACTBP60709 375 aa7.85□□□□□ -1.15
CLIP1-218ENST00000545889 ACTG1P63261 375 aa7.85□□□□□ -1.15
CLIP1-218ENST00000545889 CATR1Q13166 79 aa7.85□□□□□ -1.15
CLIP1-218ENST00000545889 ZNF124Q15973 351 aa7.85□□□□□ -1.15
CLIP1-218ENST00000545889 ZNF718Q3SXZ3 478 aa7.85□□□□□ -1.15
CLIP1-218ENST00000545889 C1orf140Q5VVS0 124 aa7.85□□□□□ -1.15
CLIP1-218ENST00000545889 H1FNTQ75WM6 255 aaPredicted RBP7.85□□□□□ -1.15
CLIP1-218ENST00000545889 OR5AS1Q8N127 324 aa7.85□□□□□ -1.15
CLIP1-218ENST00000545889 GJC3Q8NFK1 279 aa7.85□□□□□ -1.15
CLIP1-218ENST00000545889 RFT1Q96AA3 541 aa7.85□□□□□ -1.15
CLIP1-218ENST00000545889 ZNF436Q9C0F3 470 aaPredicted RBP7.85□□□□□ -1.15
CLIP1-218ENST00000545889 METTL9Q9H1A3 318 aa7.85□□□□□ -1.15
CLIP1-218ENST00000545889 HRASLSQ9HDD0 168 aa7.85□□□□□ -1.15
CLIP1-218ENST00000545889 OR2S2Q9NQN1 319 aa7.85□□□□□ -1.15
CLIP1-218ENST00000545889 CHRNA9Q9UGM1 479 aa7.85□□□□□ -1.15
CLIP1-218ENST00000545889 ZNF225Q9UK10 706 aa7.85□□□□□ -1.15
Retrieved 100 of 20,778 RNA–protein pairs in 30.2 ms