RNA–Protein interactions for RNA: ENST00000544504.5

YBX3-215, Transcript of Y-box binding protein 3, humanhuman

TSL 3

Gene YBX3, Length 583 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
YBX3-215ENST00000544504 HLA-DQA2P01906 255 aa8.4□□□□□ -1.06
YBX3-215ENST00000544504 GYPBP06028 91 aa8.4□□□□□ -1.06
YBX3-215ENST00000544504 SBK2P0C263 348 aa8.4□□□□□ -1.06
YBX3-215ENST00000544504 OR2T7P0C7T2 308 aa8.4□□□□□ -1.06
YBX3-215ENST00000544504 TMIGD3P0DMS9 266 aaPredicted RBP8.4□□□□□ -1.06
YBX3-215ENST00000544504 CTLA4P16410 223 aa8.4□□□□□ -1.06
YBX3-215ENST00000544504 LAP3P28838 519 aa8.4□□□□□ -1.06
YBX3-215ENST00000544504 PYCR1P32322 319 aa8.4□□□□□ -1.06
YBX3-215ENST00000544504 OR3A2P47893 321 aa8.4□□□□□ -1.06
YBX3-215ENST00000544504 RUNX1T1Q06455 604 aa8.4□□□□□ -1.06
YBX3-215ENST00000544504 KCNMB1Q16558 191 aa8.4□□□□□ -1.06
YBX3-215ENST00000544504 NRN1LQ496H8 165 aa8.4□□□□□ -1.06
YBX3-215ENST00000544504 TEX30Q5JUR7 227 aa8.4□□□□□ -1.06
YBX3-215ENST00000544504 LINC01590Q5TEZ4 76 aa8.4□□□□□ -1.06
YBX3-215ENST00000544504 MTFR2Q6P444 385 aa8.4□□□□□ -1.06
YBX3-215ENST00000544504 SLC25A47Q6Q0C1 308 aa8.4□□□□□ -1.06
YBX3-215ENST00000544504 SLC16A9Q7RTY1 509 aa8.4□□□□□ -1.06
YBX3-215ENST00000544504 BCDIN3DQ7Z5W3 292 aaKnown RBP8.4□□□□□ -1.06
YBX3-215ENST00000544504 LSRQ86X29 649 aaPredicted RBP8.4□□□□□ -1.06
YBX3-215ENST00000544504 ZNF454Q8N9F8 522 aa8.4□□□□□ -1.06
YBX3-215ENST00000544504 BBS1Q8NFJ9 593 aa8.4□□□□□ -1.06
YBX3-215ENST00000544504 OR51G2Q8NGK0 314 aa8.4□□□□□ -1.06
YBX3-215ENST00000544504 OR52I1Q8NGK6 324 aa8.4□□□□□ -1.06
YBX3-215ENST00000544504 OR2T27Q8NH04 317 aa8.4□□□□□ -1.06
YBX3-215ENST00000544504 HAVCR2Q8TDQ0 301 aa8.4□□□□□ -1.06
YBX3-215ENST00000544504 FCGR1BQ92637 280 aa8.4□□□□□ -1.06
YBX3-215ENST00000544504 NMD3Q96D46 503 aaKnown RBP8.4□□□□□ -1.06
YBX3-215ENST00000544504 LGALS12Q96DT0 336 aa8.4□□□□□ -1.06
YBX3-215ENST00000544504 ZMYND19Q96E35 227 aaPredicted RBP8.4□□□□□ -1.06
YBX3-215ENST00000544504 C14orf79Q96F83 325 aa8.4□□□□□ -1.06
YBX3-215ENST00000544504 INTS14Q96SY0 518 aa8.4□□□□□ -1.06
YBX3-215ENST00000544504 SFXN3Q9BWM7 321 aa8.4□□□□□ -1.06
YBX3-215ENST00000544504 CDCA4Q9BXL8 241 aa8.4□□□□□ -1.06
YBX3-215ENST00000544504 CCDC90BQ9GZT6 254 aa8.4□□□□□ -1.06
YBX3-215ENST00000544504 AASSQ9UDR5 926 aa8.4□□□□□ -1.06
YBX3-215ENST00000544504 ERGIC3Q9Y282 383 aa8.4□□□□□ -1.06
YBX3-215ENST00000544504 A0A1W2PPL8 197 aa8.39□□□□□ -1.07
YBX3-215ENST00000544504 HSPB2A8KAH6 182 aa8.39□□□□□ -1.07
YBX3-215ENST00000544504 C12orf71A8MTZ7 269 aa8.39□□□□□ -1.07
YBX3-215ENST00000544504 E9PLN8 166 aa8.39□□□□□ -1.07
YBX3-215ENST00000544504 ZNF670-ZNF695F2Z2N8 137 aa8.39□□□□□ -1.07
YBX3-215ENST00000544504 WISP2O76076 250 aa8.39□□□□□ -1.07
YBX3-215ENST00000544504 FARS2O95363 451 aaKnown RBP8.39□□□□□ -1.07
YBX3-215ENST00000544504 IL18BPO95998 194 aa8.39□□□□□ -1.07
YBX3-215ENST00000544504 CLPTM1O96005 669 aa8.39□□□□□ -1.07
YBX3-215ENST00000544504 IGHA1P01876 353 aa8.39□□□□□ -1.07
YBX3-215ENST00000544504 CLUP10909 449 aa8.39□□□□□ -1.07
YBX3-215ENST00000544504 MSR1P21757 451 aa8.39□□□□□ -1.07
YBX3-215ENST00000544504 CTSSP25774 331 aa8.39□□□□□ -1.07
YBX3-215ENST00000544504 CEACAM8P31997 349 aaPredicted RBP8.39□□□□□ -1.07
YBX3-215ENST00000544504 OPRM1P35372 400 aa8.39□□□□□ -1.07
YBX3-215ENST00000544504 ENTPD1P49961 510 aa8.39□□□□□ -1.07
YBX3-215ENST00000544504 KRTAP10-9P60411 292 aa8.39□□□□□ -1.07
YBX3-215ENST00000544504 LSM6P62312 80 aaKnown RBP8.39□□□□□ -1.07
YBX3-215ENST00000544504 ACTA2P62736 377 aa8.39□□□□□ -1.07
YBX3-215ENST00000544504 ACTG2P63267 376 aa8.39□□□□□ -1.07
YBX3-215ENST00000544504 MRPS34P82930 218 aaKnown RBP8.39□□□□□ -1.07
YBX3-215ENST00000544504 TGFBR3Q03167 851 aa8.39□□□□□ -1.07
YBX3-215ENST00000544504 GUSBP1Q15486 140 aa8.39□□□□□ -1.07
YBX3-215ENST00000544504 HSPB2Q16082 182 aa8.39□□□□□ -1.07
YBX3-215ENST00000544504 FBXW9Q5XUX1 488 aa8.39□□□□□ -1.07
YBX3-215ENST00000544504 LRFN4Q6PJG9 635 aa8.39□□□□□ -1.07
YBX3-215ENST00000544504 TMPRSS11AQ6ZMR5 421 aa8.39□□□□□ -1.07
YBX3-215ENST00000544504 FOXL2NBQ6ZUU3 175 aa8.39□□□□□ -1.07
YBX3-215ENST00000544504 DPPA2Q7Z7J5 298 aa8.39□□□□□ -1.07
YBX3-215ENST00000544504 DOLPP1Q86YN1 238 aa8.39□□□□□ -1.07
YBX3-215ENST00000544504 SLC35F2Q8IXU6 374 aa8.39□□□□□ -1.07
YBX3-215ENST00000544504 UBE2J2Q8N2K1 259 aa8.39□□□□□ -1.07
YBX3-215ENST00000544504 CNEP1R1Q8N9A8 125 aa8.39□□□□□ -1.07
YBX3-215ENST00000544504 C9orf106Q8NAJ2 232 aa8.39□□□□□ -1.07
YBX3-215ENST00000544504 SLC26A10Q8NG04 563 aa8.39□□□□□ -1.07
YBX3-215ENST00000544504 OR51L1Q8NGJ5 315 aa8.39□□□□□ -1.07
YBX3-215ENST00000544504 ASB17Q8WXJ9 295 aa8.39□□□□□ -1.07
YBX3-215ENST00000544504 NSMAFQ92636 917 aa8.39□□□□□ -1.07
YBX3-215ENST00000544504 KISS1RQ969F8 398 aaPredicted RBP8.39□□□□□ -1.07
YBX3-215ENST00000544504 ZNF775Q96BV0 537 aaPredicted RBP8.39□□□□□ -1.07
YBX3-215ENST00000544504 TSSK2Q96PF2 358 aa8.39□□□□□ -1.07
YBX3-215ENST00000544504 VKORC1Q9BQB6 163 aa8.39□□□□□ -1.07
YBX3-215ENST00000544504 TTYH2Q9BSA4 534 aa8.39□□□□□ -1.07
YBX3-215ENST00000544504 MND1Q9BWT6 205 aa8.39□□□□□ -1.07
YBX3-215ENST00000544504 CDADC1Q9BWV3 514 aa8.39□□□□□ -1.07
YBX3-215ENST00000544504 RBM24Q9BX46 236 aaKnown RBP8.39□□□□□ -1.07
YBX3-215ENST00000544504 KCNN2Q9H2S1 579 aa8.39□□□□□ -1.07
YBX3-215ENST00000544504 NELFAQ9H3P2 528 aa8.39□□□□□ -1.07
YBX3-215ENST00000544504 PIGMQ9H3S5 423 aa8.39□□□□□ -1.07
YBX3-215ENST00000544504 WDR76Q9H967 626 aa8.39□□□□□ -1.07
YBX3-215ENST00000544504 ADGRL4Q9HBW9 690 aa8.39□□□□□ -1.07
YBX3-215ENST00000544504 MALT1Q9UDY8 824 aa8.39□□□□□ -1.07
YBX3-215ENST00000544504 CLEC4AQ9UMR7 237 aa8.39□□□□□ -1.07
YBX3-215ENST00000544504 PROCRQ9UNN8 238 aa8.39□□□□□ -1.07
YBX3-215ENST00000544504 COA3Q9Y2R0 106 aaPredicted RBP8.39□□□□□ -1.07
YBX3-215ENST00000544504 POLR1DQ9Y2S0 133 aa8.39□□□□□ -1.07
YBX3-215ENST00000544504 FAM215AQ9Y5M1 114 aa8.39□□□□□ -1.07
YBX3-215ENST00000544504 GTF3C1Q12789 2109 aa8.39□□□□□ -1.07
YBX3-215ENST00000544504 SVILO95425 2214 aa8.38□□□□□ -1.07
YBX3-215ENST00000544504 VPS13CQ709C8 3753 aa8.38□□□□□ -1.07
YBX3-215ENST00000544504 TMEM129A0AVI4 362 aa8.38□□□□□ -1.07
YBX3-215ENST00000544504 DAPL1A0PJW8 107 aa8.38□□□□□ -1.07
YBX3-215ENST00000544504 TRIM64CA6NLI5 447 aa8.38□□□□□ -1.07
YBX3-215ENST00000544504 DCTN6O00399 190 aa8.38□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 30.6 ms