RNA–Protein interactions for RNA: ENST00000544363.5

CCM2-219, Transcript of CCM2 scaffold protein, humanhuman

TSL 3 BASIC

Gene CCM2, Length 1,620 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCM2-219ENST00000544363 YES1P07947 543 aa26.91■■□□□ 1.9
CCM2-219ENST00000544363 FCGR2AP12318 317 aa26.91■■□□□ 1.9
CCM2-219ENST00000544363 CELP19835 753 aa26.91■■□□□ 1.9
CCM2-219ENST00000544363 CDAP32320 146 aa26.91■■□□□ 1.9
CCM2-219ENST00000544363 KCNMB1Q16558 191 aa26.91■■□□□ 1.9
CCM2-219ENST00000544363 TIMM50Q3ZCQ8 353 aa26.91■■□□□ 1.9
CCM2-219ENST00000544363 FAM180AQ6UWF9 173 aa26.91■■□□□ 1.9
CCM2-219ENST00000544363 GPR137Q96N19 417 aa26.91■■□□□ 1.9
CCM2-219ENST00000544363 B3GAT2Q9NPZ5 323 aa26.91■■□□□ 1.9
CCM2-219ENST00000544363 CACNA1AO00555 2505 aa26.91■■□□□ 1.9
CCM2-219ENST00000544363 MED19A0JLT2 244 aaPredicted RBP26.9■■□□□ 1.9
CCM2-219ENST00000544363 TRIM64BA6NI03 449 aa26.9■■□□□ 1.9
CCM2-219ENST00000544363 PSMD9O00233 223 aa26.9■■□□□ 1.9
CCM2-219ENST00000544363 ZNHIT1O43257 154 aa26.9■■□□□ 1.9
CCM2-219ENST00000544363 TMCC2O75069 709 aa26.9■■□□□ 1.9
CCM2-219ENST00000544363 UPK3AO75631 287 aa26.9■■□□□ 1.9
CCM2-219ENST00000544363 SULT1C4O75897 302 aa26.9■■□□□ 1.9
CCM2-219ENST00000544363 GBX2P52951 348 aaPredicted RBP26.9■■□□□ 1.9
CCM2-219ENST00000544363 GPR50Q13585 617 aa26.9■■□□□ 1.9
CCM2-219ENST00000544363 EIF2B1Q14232 305 aaKnown RBP26.9■■□□□ 1.9
CCM2-219ENST00000544363 FOXL2NBQ6ZUU3 175 aa26.9■■□□□ 1.9
CCM2-219ENST00000544363 GPR137CQ8N3F9 429 aa26.9■■□□□ 1.9
CCM2-219ENST00000544363 AMELYQ99218 206 aa26.9■■□□□ 1.9
CCM2-219ENST00000544363 TTYH2Q9BSA4 534 aa26.9■■□□□ 1.9
CCM2-219ENST00000544363 CDADC1Q9BWV3 514 aa26.9■■□□□ 1.9
CCM2-219ENST00000544363 CALHM2Q9HA72 323 aa26.9■■□□□ 1.9
CCM2-219ENST00000544363 CLCF1Q9UBD9 225 aa26.9■■□□□ 1.9
CCM2-219ENST00000544363 MRM2Q9UI43 246 aaKnown RBP26.9■■□□□ 1.9
CCM2-219ENST00000544363 CLEC4AQ9UMR7 237 aa26.9■■□□□ 1.9
CCM2-219ENST00000544363 SIRT4Q9Y6E7 314 aaPredicted RBP26.9■■□□□ 1.9
CCM2-219ENST00000544363 METTL15A6NJ78 407 aa26.9■■□□□ 1.9
CCM2-219ENST00000544363 KRT8P05787 483 aa26.9■■□□□ 1.9
CCM2-219ENST00000544363 TACSTD2P09758 323 aa26.9■■□□□ 1.9
CCM2-219ENST00000544363 PSMA1P25786 263 aaKnown RBP26.9■■□□□ 1.9
CCM2-219ENST00000544363 LSM3P62310 102 aaKnown RBP26.9■■□□□ 1.9
CCM2-219ENST00000544363 ABHD6Q9BV23 337 aa26.9■■□□□ 1.9
CCM2-219ENST00000544363 RBM24Q9BX46 236 aaKnown RBP26.9■■□□□ 1.9
CCM2-219ENST00000544363 GP6Q9HCN6 339 aa26.9■■□□□ 1.9
CCM2-219ENST00000544363 POLE4Q9NR33 117 aa26.9■■□□□ 1.9
CCM2-219ENST00000544363 ACOXLQ9NUZ1 547 aa26.9■■□□□ 1.9
CCM2-219ENST00000544363 SF3B6Q9Y3B4 125 aaKnown RBP26.9■■□□□ 1.9
CCM2-219ENST00000544363 GUCA1AP43080 201 aaPredicted RBP26.89■■□□□ 1.9
CCM2-219ENST00000544363 ZNF84P51523 738 aa26.89■■□□□ 1.9
CCM2-219ENST00000544363 AQP6Q13520 282 aa26.89■■□□□ 1.9
CCM2-219ENST00000544363 RIPPLY2Q5TAB7 128 aa26.89■■□□□ 1.9
CCM2-219ENST00000544363 FAM220AQ7Z4H9 259 aa26.89■■□□□ 1.9
CCM2-219ENST00000544363 Q8NA96 180 aa26.89■■□□□ 1.9
CCM2-219ENST00000544363 OR5M9Q8NGP3 310 aa26.89■■□□□ 1.9
CCM2-219ENST00000544363 CYB5R1Q9UHQ9 305 aa26.89■■□□□ 1.9
CCM2-219ENST00000544363 IKZF2Q9UKS7 526 aa26.89■■□□□ 1.9
CCM2-219ENST00000544363 ABHD16AO95870 558 aa26.88■■□□□ 1.89
CCM2-219ENST00000544363 OR8G3PP0DMU2 310 aa26.88■■□□□ 1.89
CCM2-219ENST00000544363 P4HA3Q7Z4N8 544 aa26.88■■□□□ 1.89
CCM2-219ENST00000544363 LINC00346Q8IVM7 164 aa26.88■■□□□ 1.89
CCM2-219ENST00000544363 OR8B4Q96RC9 309 aa26.88■■□□□ 1.89
CCM2-219ENST00000544363 CHCHD6Q9BRQ6 235 aa26.88■■□□□ 1.89
CCM2-219ENST00000544363 EMC7Q9NPA0 242 aa26.88■■□□□ 1.89
CCM2-219ENST00000544363 STUB1Q9UNE7 303 aa26.88■■□□□ 1.89
CCM2-219ENST00000544363 GRIP1Q9Y3R0 1128 aa26.88■■□□□ 1.89
CCM2-219ENST00000544363 SLC22A1O15245 554 aa26.87■■□□□ 1.89
CCM2-219ENST00000544363 GABRA5P31644 462 aa26.87■■□□□ 1.89
CCM2-219ENST00000544363 CRYBB2P43320 205 aa26.87■■□□□ 1.89
CCM2-219ENST00000544363 VBP1P61758 197 aa26.87■■□□□ 1.89
CCM2-219ENST00000544363 SIRPAP78324 504 aa26.87■■□□□ 1.89
CCM2-219ENST00000544363 KRTCAP3Q53RY4 240 aa26.87■■□□□ 1.89
CCM2-219ENST00000544363 KCTD18Q6PI47 426 aaPredicted RBP26.87■■□□□ 1.89
CCM2-219ENST00000544363 RPTNQ6XPR3 784 aa26.87■■□□□ 1.89
CCM2-219ENST00000544363 YIPF7Q8N8F6 280 aa26.87■■□□□ 1.89
CCM2-219ENST00000544363 LINC00470Q9BZP3 86 aa26.87■■□□□ 1.89
CCM2-219ENST00000544363 SLCO5A1Q9H2Y9 848 aa26.87■■□□□ 1.89
CCM2-219ENST00000544363 CRLF2Q9HC73 371 aa26.87■■□□□ 1.89
CCM2-219ENST00000544363 SLCO1C1Q9NYB5 712 aa26.87■■□□□ 1.89
CCM2-219ENST00000544363 ST6GALNAC2Q9UJ37 374 aa26.87■■□□□ 1.89
CCM2-219ENST00000544363 LOC100506127A0A0U1RQW1 187 aa26.87■■□□□ 1.89
CCM2-219ENST00000544363 AHRRA9YTQ3 701 aa26.87■■□□□ 1.89
CCM2-219ENST00000544363 PLPP2O43688 288 aa26.87■■□□□ 1.89
CCM2-219ENST00000544363 GPX5O75715 221 aa26.87■■□□□ 1.89
CCM2-219ENST00000544363 NCS1P62166 190 aa26.87■■□□□ 1.89
CCM2-219ENST00000544363 RPS25P62851 125 aaKnown RBP26.87■■□□□ 1.89
CCM2-219ENST00000544363 ROM1Q03395 351 aa26.87■■□□□ 1.89
CCM2-219ENST00000544363 SGCAQ16586 387 aa26.87■■□□□ 1.89
CCM2-219ENST00000544363 CCDC58Q4VC31 144 aa26.87■■□□□ 1.89
CCM2-219ENST00000544363 ZNF324BQ6AW86 544 aaPredicted RBP26.87■■□□□ 1.89
CCM2-219ENST00000544363 ZC3HAV1Q7Z2W4 902 aaKnown RBP26.87■■□□□ 1.89
CCM2-219ENST00000544363 DCXRQ7Z4W1 244 aa26.87■■□□□ 1.89
CCM2-219ENST00000544363 FGD2Q7Z6J4 655 aa26.87■■□□□ 1.89
CCM2-219ENST00000544363 OR52N5Q8NH56 324 aa26.87■■□□□ 1.89
CCM2-219ENST00000544363 CPT1CQ8TCG5 803 aa26.87■■□□□ 1.89
CCM2-219ENST00000544363 ST7LQ8TDW4 575 aa26.87■■□□□ 1.89
CCM2-219ENST00000544363 ZNF837Q96EG3 531 aaPredicted RBP26.87■■□□□ 1.89
CCM2-219ENST00000544363 TRIB1Q96RU8 372 aa26.87■■□□□ 1.89
CCM2-219ENST00000544363 NELFAQ9H3P2 528 aa26.87■■□□□ 1.89
CCM2-219ENST00000544363 OR6C65A6NJZ3 312 aa26.86■■□□□ 1.89
CCM2-219ENST00000544363 OGG1O15527 345 aa26.86■■□□□ 1.89
CCM2-219ENST00000544363 LRRTM2O43300 516 aa26.86■■□□□ 1.89
CCM2-219ENST00000544363 MSR1P21757 451 aa26.86■■□□□ 1.89
CCM2-219ENST00000544363 LSM6P62312 80 aaKnown RBP26.86■■□□□ 1.89
CCM2-219ENST00000544363 MRPL28Q13084 256 aaKnown RBP26.86■■□□□ 1.89
CCM2-219ENST00000544363 SPCS2Q15005 226 aa26.86■■□□□ 1.89
CCM2-219ENST00000544363 DMKNQ6E0U4 476 aaPredicted RBP26.86■■□□□ 1.89
Retrieved 100 of 20,778 RNA–protein pairs in 66.9 ms