RNA–Protein interactions for RNA: ENST00000541286.5

SFSWAP-210, Transcript of splicing factor SWAP, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SFSWAP, Length 3,219 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SFSWAP-210ENST00000541286 TMEM185BQ9H7F4 350 aa12.95□□□□□ -0.34
SFSWAP-210ENST00000541286 ENTPD2Q9Y5L3 495 aa12.95□□□□□ -0.34
SFSWAP-210ENST00000541286 RP1L1Q8IWN7 2480 aaPredicted RBP12.95□□□□□ -0.34
SFSWAP-210ENST00000541286 TMEM72A0PK05 275 aa12.95□□□□□ -0.34
SFSWAP-210ENST00000541286 PYCARD-AS1I3L0S3 204 aa12.95□□□□□ -0.34
SFSWAP-210ENST00000541286 BRINP1O60477 761 aa12.95□□□□□ -0.34
SFSWAP-210ENST00000541286 NDUFB2O95178 105 aa12.95□□□□□ -0.34
SFSWAP-210ENST00000541286 HPGDP15428 266 aa12.95□□□□□ -0.34
SFSWAP-210ENST00000541286 NBL1P41271 181 aa12.95□□□□□ -0.34
SFSWAP-210ENST00000541286 INSM1Q01101 510 aaPredicted RBP12.95□□□□□ -0.34
SFSWAP-210ENST00000541286 KLF9Q13886 244 aaPredicted RBP12.95□□□□□ -0.34
SFSWAP-210ENST00000541286 PAN3Q58A45 887 aaKnown RBP12.95□□□□□ -0.34
SFSWAP-210ENST00000541286 Q96M85 177 aa12.95□□□□□ -0.34
SFSWAP-210ENST00000541286 UBL7Q96S82 380 aaPredicted RBP12.95□□□□□ -0.34
SFSWAP-210ENST00000541286 ULBP3Q9BZM4 244 aa12.95□□□□□ -0.34
SFSWAP-210ENST00000541286 MFFQ9GZY8 342 aa12.95□□□□□ -0.34
SFSWAP-210ENST00000541286 SERPINA3P01011 423 aa12.94□□□□□ -0.34
SFSWAP-210ENST00000541286 IGKV1D-16P01601 117 aa12.94□□□□□ -0.34
SFSWAP-210ENST00000541286 SRMP19623 302 aa12.94□□□□□ -0.34
SFSWAP-210ENST00000541286 PVALBP20472 110 aaPredicted RBP12.94□□□□□ -0.34
SFSWAP-210ENST00000541286 AKR1C3P42330 323 aa12.94□□□□□ -0.34
SFSWAP-210ENST00000541286 ACTC1P68032 377 aa12.94□□□□□ -0.34
SFSWAP-210ENST00000541286 ACTA1P68133 377 aa12.94□□□□□ -0.34
SFSWAP-210ENST00000541286 CEBPEQ15744 281 aa12.94□□□□□ -0.34
SFSWAP-210ENST00000541286 PRICKLE4Q2TBC4 344 aa12.94□□□□□ -0.34
SFSWAP-210ENST00000541286 OR4C3Q8NH37 302 aa12.94□□□□□ -0.34
SFSWAP-210ENST00000541286 HAVCR2Q8TDQ0 301 aa12.94□□□□□ -0.34
SFSWAP-210ENST00000541286 DVL3Q92997 716 aaPredicted RBP12.94□□□□□ -0.34
SFSWAP-210ENST00000541286 SMIM19Q96E16 107 aa12.94□□□□□ -0.34
SFSWAP-210ENST00000541286 LMF1Q96S06 567 aa12.94□□□□□ -0.34
SFSWAP-210ENST00000541286 DUSP22Q9NRW4 184 aa12.94□□□□□ -0.34
SFSWAP-210ENST00000541286 CTSFQ9UBX1 484 aa12.94□□□□□ -0.34
SFSWAP-210ENST00000541286 ST6GALNAC2Q9UJ37 374 aa12.94□□□□□ -0.34
SFSWAP-210ENST00000541286 A0A0B4J2E0 115 aa12.94□□□□□ -0.34
SFSWAP-210ENST00000541286 A0A1B0GX12 115 aa12.94□□□□□ -0.34
SFSWAP-210ENST00000541286 OR6C68A6NDL8 312 aa12.94□□□□□ -0.34
SFSWAP-210ENST00000541286 TTLL8A6PVC2 850 aa12.94□□□□□ -0.34
SFSWAP-210ENST00000541286 GPANK1O95872 356 aa12.94□□□□□ -0.34
SFSWAP-210ENST00000541286 MAOAP21397 527 aa12.94□□□□□ -0.34
SFSWAP-210ENST00000541286 NFYBP25208 207 aa12.94□□□□□ -0.34
SFSWAP-210ENST00000541286 AQP2P41181 271 aa12.94□□□□□ -0.34
SFSWAP-210ENST00000541286 TMEM69Q5SWH9 247 aa12.94□□□□□ -0.34
SFSWAP-210ENST00000541286 OR4D10Q8NGI6 311 aa12.94□□□□□ -0.34
SFSWAP-210ENST00000541286 TNFAIP8L1Q8WVP5 186 aa12.94□□□□□ -0.34
SFSWAP-210ENST00000541286 CHST6Q9GZX3 395 aa12.94□□□□□ -0.34
SFSWAP-210ENST00000541286 IGHV3-20A0A0C4DH32 117 aa12.94□□□□□ -0.34
SFSWAP-210ENST00000541286 CREBL2O60519 120 aaPredicted RBP12.94□□□□□ -0.34
SFSWAP-210ENST00000541286 TMIGD3P0DMS9 266 aaPredicted RBP12.94□□□□□ -0.34
SFSWAP-210ENST00000541286 SNRPEP62304 92 aaKnown RBP12.94□□□□□ -0.34
SFSWAP-210ENST00000541286 SCRN3Q0VDG4 424 aa12.94□□□□□ -0.34
SFSWAP-210ENST00000541286 RPL13AP3Q6NVV1 102 aa12.94□□□□□ -0.34
SFSWAP-210ENST00000541286 TMPRSS12Q86WS5 348 aa12.94□□□□□ -0.34
SFSWAP-210ENST00000541286 PM20D2Q8IYS1 436 aa12.94□□□□□ -0.34
SFSWAP-210ENST00000541286 PXT1Q8NFP0 134 aa12.94□□□□□ -0.34
SFSWAP-210ENST00000541286 SYNPRQ8TBG9 265 aa12.94□□□□□ -0.34
SFSWAP-210ENST00000541286 TM4SF19Q96DZ7 209 aa12.94□□□□□ -0.34
SFSWAP-210ENST00000541286 SEC22AQ96IW7 307 aa12.94□□□□□ -0.34
SFSWAP-210ENST00000541286 ADAD1Q96M93 576 aaKnown RBP12.94□□□□□ -0.34
SFSWAP-210ENST00000541286 TCF7L1Q9HCS4 588 aa12.94□□□□□ -0.34
SFSWAP-210ENST00000541286 SLC6A5Q9Y345 797 aa12.94□□□□□ -0.34
SFSWAP-210ENST00000541286 LOC100509620A0A075B734 347 aa12.93□□□□□ -0.34
SFSWAP-210ENST00000541286 TGFBR3LH3BV60 316 aa12.93□□□□□ -0.34
SFSWAP-210ENST00000541286 DOK2O60496 412 aa12.93□□□□□ -0.34
SFSWAP-210ENST00000541286 EIF3GO75821 320 aaKnown RBP eCLIP12.93□□□□□ -0.34
SFSWAP-210ENST00000541286 LYPD3O95274 346 aa12.93□□□□□ -0.34
SFSWAP-210ENST00000541286 GPR3P46089 330 aa12.93□□□□□ -0.34
SFSWAP-210ENST00000541286 RAB13P51153 203 aa12.93□□□□□ -0.34
SFSWAP-210ENST00000541286 DBX2Q6ZNG2 339 aa12.93□□□□□ -0.34
SFSWAP-210ENST00000541286 PUSL1Q8N0Z8 303 aaKnown RBP12.93□□□□□ -0.34
SFSWAP-210ENST00000541286 NSMAFQ92636 917 aa12.93□□□□□ -0.34
SFSWAP-210ENST00000541286 ZNF501Q96CX3 271 aaPredicted RBP12.93□□□□□ -0.34
SFSWAP-210ENST00000541286 TCTN2Q96GX1 697 aa12.93□□□□□ -0.34
SFSWAP-210ENST00000541286 TWSG1Q9GZX9 223 aa12.93□□□□□ -0.34
SFSWAP-210ENST00000541286 NIT2Q9NQR4 276 aa12.93□□□□□ -0.34
SFSWAP-210ENST00000541286 COA4Q9NYJ1 87 aa12.93□□□□□ -0.34
SFSWAP-210ENST00000541286 PTTG3PQ9NZH4 202 aa12.93□□□□□ -0.34
SFSWAP-210ENST00000541286 PISDQ9UG56 409 aa12.93□□□□□ -0.34
SFSWAP-210ENST00000541286 NPFFR2Q9Y5X5 522 aa12.93□□□□□ -0.34
SFSWAP-210ENST00000541286 B3GALT1Q9Y5Z6 326 aa12.93□□□□□ -0.34
SFSWAP-210ENST00000541286 HLA-DQA2P01906 255 aa12.93□□□□□ -0.34
SFSWAP-210ENST00000541286 SRSF3P84103 164 aaKnown RBP12.93□□□□□ -0.34
SFSWAP-210ENST00000541286 PSG6Q00889 435 aa12.93□□□□□ -0.34
SFSWAP-210ENST00000541286 TRAM1Q15629 374 aa12.93□□□□□ -0.34
SFSWAP-210ENST00000541286 HES3Q5TGS1 186 aa12.93□□□□□ -0.34
SFSWAP-210ENST00000541286 RABEPKQ7Z6M1 372 aa12.93□□□□□ -0.34
SFSWAP-210ENST00000541286 PXKQ7Z7A4 578 aa12.93□□□□□ -0.34
SFSWAP-210ENST00000541286 FAM219AQ8IW50 185 aa12.93□□□□□ -0.34
SFSWAP-210ENST00000541286 NRIP3Q9NQ35 241 aa12.93□□□□□ -0.34
SFSWAP-210ENST00000541286 INPP5EQ9NRR6 644 aa12.93□□□□□ -0.34
SFSWAP-210ENST00000541286 TAS2R10Q9NYW0 307 aa12.93□□□□□ -0.34
SFSWAP-210ENST00000541286 MED11Q9P086 117 aa12.93□□□□□ -0.34
SFSWAP-210ENST00000541286 MYEF2Q9P2K5 600 aaKnown RBP12.93□□□□□ -0.34
SFSWAP-210ENST00000541286 GLS2Q9UI32 602 aa12.93□□□□□ -0.34
SFSWAP-210ENST00000541286 ZNF879B4DU55 563 aa12.92□□□□□ -0.34
SFSWAP-210ENST00000541286 SULT1C2O00338 296 aa12.92□□□□□ -0.34
SFSWAP-210ENST00000541286 ZFPL1O95159 310 aa12.92□□□□□ -0.34
SFSWAP-210ENST00000541286 LUMP51884 338 aaPredicted RBP12.92□□□□□ -0.34
SFSWAP-210ENST00000541286 NANOS3P60323 173 aaKnown RBP12.92□□□□□ -0.34
SFSWAP-210ENST00000541286 METTL11BQ5VVY1 283 aa12.92□□□□□ -0.34
SFSWAP-210ENST00000541286 LDLRAD3Q86YD5 345 aa12.92□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 38.7 ms