RNA–Protein interactions for RNA: ENST00000540784.5

DDB1-218, Transcript of damage specific DNA binding protein 1, humanhuman

TSL 3

Gene DDB1, Length 1,119 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDB1-218ENST00000540784 ZAR1LA6NP61 321 aa13.5□□□□□ -0.25
DDB1-218ENST00000540784 PRR23D1E9PI22 279 aaPredicted RBP13.5□□□□□ -0.25
DDB1-218ENST00000540784 RAB36O95755 333 aa13.5□□□□□ -0.25
DDB1-218ENST00000540784 HLA-DQA2P01906 255 aa13.5□□□□□ -0.25
DDB1-218ENST00000540784 SCG5P05408 212 aa13.5□□□□□ -0.25
DDB1-218ENST00000540784 CST2P09228 141 aa13.5□□□□□ -0.25
DDB1-218ENST00000540784 PRR23D2P0DMB1 279 aaPredicted RBP13.5□□□□□ -0.25
DDB1-218ENST00000540784 EPHA2P29317 976 aa13.5□□□□□ -0.25
DDB1-218ENST00000540784 PYCR1P32322 319 aa13.5□□□□□ -0.25
DDB1-218ENST00000540784 PTDSS1P48651 473 aaKnown RBP13.5□□□□□ -0.25
DDB1-218ENST00000540784 PCBD1P61457 104 aa13.5□□□□□ -0.25
DDB1-218ENST00000540784 HSF2Q03933 536 aa13.5□□□□□ -0.25
DDB1-218ENST00000540784 GLO1Q04760 184 aa13.5□□□□□ -0.25
DDB1-218ENST00000540784 TRIP10Q15642 601 aa13.5□□□□□ -0.25
DDB1-218ENST00000540784 KCNMB1Q16558 191 aa13.5□□□□□ -0.25
DDB1-218ENST00000540784 ZIK1Q3SY52 487 aaPredicted RBP13.5□□□□□ -0.25
DDB1-218ENST00000540784 SLX4IPQ5VYV7 408 aa13.5□□□□□ -0.25
DDB1-218ENST00000540784 UGT2A3Q6UWM9 527 aa13.5□□□□□ -0.25
DDB1-218ENST00000540784 DEPDC4Q8N2C3 294 aa13.5□□□□□ -0.25
DDB1-218ENST00000540784 PROKR2Q8NFJ6 384 aa13.5□□□□□ -0.25
DDB1-218ENST00000540784 C11orf40Q8WZ69 217 aa13.5□□□□□ -0.25
DDB1-218ENST00000540784 PTP4A1Q93096 173 aa13.5□□□□□ -0.25
DDB1-218ENST00000540784 FBXO17Q96EF6 278 aa13.5□□□□□ -0.25
DDB1-218ENST00000540784 RADILQ96JH8 1075 aa13.5□□□□□ -0.25
DDB1-218ENST00000540784 WACQ9BTA9 647 aa13.5□□□□□ -0.25
DDB1-218ENST00000540784 GABARAPL3Q9BY60 117 aa13.5□□□□□ -0.25
DDB1-218ENST00000540784 PRRG3Q9BZD7 231 aa13.5□□□□□ -0.25
DDB1-218ENST00000540784 NMNAT2Q9BZQ4 307 aa13.5□□□□□ -0.25
DDB1-218ENST00000540784 RACGAP1Q9H0H5 632 aa13.5□□□□□ -0.25
DDB1-218ENST00000540784 EMC7Q9NPA0 242 aa13.5□□□□□ -0.25
DDB1-218ENST00000540784 FBXL3Q9UKT7 428 aa13.5□□□□□ -0.25
DDB1-218ENST00000540784 TIMM10BQ9Y5J6 103 aa13.5□□□□□ -0.25
DDB1-218ENST00000540784 IGHV1-18A0A0C4DH31 117 aa13.49□□□□□ -0.25
DDB1-218ENST00000540784 FAM183AA6NL82 134 aa13.49□□□□□ -0.25
DDB1-218ENST00000540784 ABCD4O14678 606 aa13.49□□□□□ -0.25
DDB1-218ENST00000540784 GPANK1O95872 356 aa13.49□□□□□ -0.25
DDB1-218ENST00000540784 IGKV3-15P01624 115 aa13.49□□□□□ -0.25
DDB1-218ENST00000540784 IGLV1-44P01699 117 aa13.49□□□□□ -0.25
DDB1-218ENST00000540784 LOXP28300 417 aaPredicted RBP13.49□□□□□ -0.25
DDB1-218ENST00000540784 IDH3GP51553 393 aaPredicted RBP13.49□□□□□ -0.25
DDB1-218ENST00000540784 LSM6P62312 80 aaKnown RBP13.49□□□□□ -0.25
DDB1-218ENST00000540784 TEKQ02763 1124 aa13.49□□□□□ -0.25
DDB1-218ENST00000540784 PLP2Q04941 152 aa13.49□□□□□ -0.25
DDB1-218ENST00000540784 DBPQ10586 325 aaPredicted RBP13.49□□□□□ -0.25
DDB1-218ENST00000540784 LRRC36Q1X8D7 754 aa13.49□□□□□ -0.25
DDB1-218ENST00000540784 LPCAT4Q643R3 524 aa13.49□□□□□ -0.25
DDB1-218ENST00000540784 PLBD1Q6P4A8 553 aa13.49□□□□□ -0.25
DDB1-218ENST00000540784 SYT9Q86SS6 491 aa13.49□□□□□ -0.25
DDB1-218ENST00000540784 CDC20BQ86Y33 519 aa13.49□□□□□ -0.25
DDB1-218ENST00000540784 CPOQ8IVL8 374 aa13.49□□□□□ -0.25
DDB1-218ENST00000540784 IL17RDQ8NFM7 739 aa13.49□□□□□ -0.25
DDB1-218ENST00000540784 OR10H5Q8NGA6 315 aa13.49□□□□□ -0.25
DDB1-218ENST00000540784 OR51L1Q8NGJ5 315 aa13.49□□□□□ -0.25
DDB1-218ENST00000540784 OR9Q1Q8NGQ5 310 aa13.49□□□□□ -0.25
DDB1-218ENST00000540784 HS3ST6Q96QI5 342 aa13.49□□□□□ -0.25
DDB1-218ENST00000540784 KCNS3Q9BQ31 491 aa13.49□□□□□ -0.25
DDB1-218ENST00000540784 ZNF416Q9BWM5 594 aa13.49□□□□□ -0.25
DDB1-218ENST00000540784 CDADC1Q9BWV3 514 aa13.49□□□□□ -0.25
DDB1-218ENST00000540784 MED20Q9H944 212 aa13.49□□□□□ -0.25
DDB1-218ENST00000540784 RNF115Q9Y4L5 304 aa13.49□□□□□ -0.25
DDB1-218ENST00000540784 PKDREJQ9NTG1 2253 aa13.49□□□□□ -0.25
DDB1-218ENST00000540784 ANKHD1Q8IWZ3 2542 aaKnown RBP13.48□□□□□ -0.25
DDB1-218ENST00000540784 IQCMA0A1B0GVH7 501 aa13.48□□□□□ -0.25
DDB1-218ENST00000540784 PLAUP00749 431 aa13.48□□□□□ -0.25
DDB1-218ENST00000540784 PTHP01270 115 aa13.48□□□□□ -0.25
DDB1-218ENST00000540784 CRYAAP02489 173 aa13.48□□□□□ -0.25
DDB1-218ENST00000540784 SERPINA5P05154 406 aa13.48□□□□□ -0.25
DDB1-218ENST00000540784 GYPBP06028 91 aa13.48□□□□□ -0.25
DDB1-218ENST00000540784 MMP7P09237 267 aaPredicted RBP13.48□□□□□ -0.25
DDB1-218ENST00000540784 ZNF823P16415 610 aa13.48□□□□□ -0.25
DDB1-218ENST00000540784 ZNF32P17041 273 aa13.48□□□□□ -0.25
DDB1-218ENST00000540784 SPI1P17947 270 aa13.48□□□□□ -0.25
DDB1-218ENST00000540784 FMO3P31513 532 aa13.48□□□□□ -0.25
DDB1-218ENST00000540784 BLVRAP53004 296 aa13.48□□□□□ -0.25
DDB1-218ENST00000540784 SLC34A1Q06495 639 aa13.48□□□□□ -0.25
DDB1-218ENST00000540784 ENDOGQ14249 297 aaKnown RBP13.48□□□□□ -0.25
DDB1-218ENST00000540784 RAB39AQ14964 217 aa13.48□□□□□ -0.25
DDB1-218ENST00000540784 C12orf73Q69YU5 71 aa13.48□□□□□ -0.25
DDB1-218ENST00000540784 SLC22A25Q6T423 547 aa13.48□□□□□ -0.25
DDB1-218ENST00000540784 ZSCAN2Q7Z7L9 614 aaPredicted RBP13.48□□□□□ -0.25
DDB1-218ENST00000540784 ALDH16A1Q8IZ83 802 aa13.48□□□□□ -0.25
DDB1-218ENST00000540784 GALNT4Q8N4A0 578 aa13.48□□□□□ -0.25
DDB1-218ENST00000540784 SLC26A10Q8NG04 563 aa13.48□□□□□ -0.25
DDB1-218ENST00000540784 ZNRF4Q8WWF5 429 aa13.48□□□□□ -0.25
DDB1-218ENST00000540784 TMEM204Q9BSN7 226 aa13.48□□□□□ -0.25
DDB1-218ENST00000540784 GRIP2Q9C0E4 1043 aa13.48□□□□□ -0.25
DDB1-218ENST00000540784 OR51V1Q9H2C8 321 aa13.48□□□□□ -0.25
DDB1-218ENST00000540784 NOX3Q9HBY0 568 aa13.48□□□□□ -0.25
DDB1-218ENST00000540784 C8orf4Q9NR00 106 aa13.48□□□□□ -0.25
DDB1-218ENST00000540784 MOKQ9UQ07 419 aa13.48□□□□□ -0.25
DDB1-218ENST00000540784 TLX2O43763 284 aaPredicted RBP13.47□□□□□ -0.25
DDB1-218ENST00000540784 RRP9O43818 475 aaKnown RBP13.47□□□□□ -0.25
DDB1-218ENST00000540784 TFP02787 698 aa13.47□□□□□ -0.25
DDB1-218ENST00000540784 CELA3BP08861 270 aa13.47□□□□□ -0.25
DDB1-218ENST00000540784 CECR9P0C854 216 aa13.47□□□□□ -0.25
DDB1-218ENST00000540784 GAAP10253 952 aa13.47□□□□□ -0.25
DDB1-218ENST00000540784 CLUP10909 449 aa13.47□□□□□ -0.25
DDB1-218ENST00000540784 ZNF14P17017 642 aaPredicted RBP13.47□□□□□ -0.25
DDB1-218ENST00000540784 PSG4Q00888 419 aa13.47□□□□□ -0.25
DDB1-218ENST00000540784 PABPC1L2AQ5JQF8 200 aa13.47□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 33.9 ms