RNA–Protein interactions for RNA: ENST00000540562.1

INO80E-203, Transcript of INO80 complex subunit E, humanhuman

TSL 2

Gene INO80E, Length 3,064 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
INO80E-203ENST00000540562 DIABLOQ9NR28 239 aa12.71□□□□□ -0.37
INO80E-203ENST00000540562 MRPS18BQ9Y676 258 aaKnown RBP12.71□□□□□ -0.37
INO80E-203ENST00000540562 ATG2AQ2TAZ0 1938 aa12.71□□□□□ -0.37
INO80E-203ENST00000540562 TMEM272A0A1B0GTI8 110 aa12.71□□□□□ -0.38
INO80E-203ENST00000540562 GSTZ1O43708 216 aaPredicted RBP12.71□□□□□ -0.38
INO80E-203ENST00000540562 ZNF354AO60765 605 aaPredicted RBP12.71□□□□□ -0.38
INO80E-203ENST00000540562 NDUFB6O95139 128 aa12.71□□□□□ -0.38
INO80E-203ENST00000540562 LPLP06858 475 aa12.71□□□□□ -0.38
INO80E-203ENST00000540562 PNMTP11086 282 aa12.71□□□□□ -0.38
INO80E-203ENST00000540562 PRSS3P35030 304 aa12.71□□□□□ -0.38
INO80E-203ENST00000540562 DNASE1L1P49184 302 aa12.71□□□□□ -0.38
INO80E-203ENST00000540562 PRKXP51817 358 aa12.71□□□□□ -0.38
INO80E-203ENST00000540562 FBXW4P57775 412 aa12.71□□□□□ -0.38
INO80E-203ENST00000540562 POU3F1Q03052 451 aaPredicted RBP12.71□□□□□ -0.38
INO80E-203ENST00000540562 DCXRQ7Z4W1 244 aa12.71□□□□□ -0.38
INO80E-203ENST00000540562 TSTD1Q8NFU3 115 aa12.71□□□□□ -0.38
INO80E-203ENST00000540562 OR13C3Q8NGS6 347 aa12.71□□□□□ -0.38
INO80E-203ENST00000540562 NUDCD2Q8WVJ2 157 aa12.71□□□□□ -0.38
INO80E-203ENST00000540562 FAM131CQ96AQ9 280 aa12.71□□□□□ -0.38
INO80E-203ENST00000540562 TCTN2Q96GX1 697 aa12.71□□□□□ -0.38
INO80E-203ENST00000540562 SOX7Q9BT81 388 aa12.71□□□□□ -0.38
INO80E-203ENST00000540562 SEC61A2Q9H9S3 476 aa12.71□□□□□ -0.38
INO80E-203ENST00000540562 GPN1Q9HCN4 374 aaPredicted RBP12.71□□□□□ -0.38
INO80E-203ENST00000540562 AKAP7Q9P0M2 348 aaPredicted RBP12.71□□□□□ -0.38
INO80E-203ENST00000540562 A0A1B0GUH1 482 aa12.7□□□□□ -0.38
INO80E-203ENST00000540562 VAMP1P23763 118 aa12.7□□□□□ -0.38
INO80E-203ENST00000540562 SLC35D3Q5M8T2 416 aa12.7□□□□□ -0.38
INO80E-203ENST00000540562 ELP2Q6IA86 826 aa12.7□□□□□ -0.38
INO80E-203ENST00000540562 ARSKQ6UWY0 536 aa12.7□□□□□ -0.38
INO80E-203ENST00000540562 KCTD9Q7L273 389 aa12.7□□□□□ -0.38
INO80E-203ENST00000540562 ZBTB44Q8NCP5 570 aa12.7□□□□□ -0.38
INO80E-203ENST00000540562 OR1J2Q8NGS2 313 aa12.7□□□□□ -0.38
INO80E-203ENST00000540562 OTOSQ8NHW6 89 aa12.7□□□□□ -0.38
INO80E-203ENST00000540562 PLCL2Q9UPR0 1127 aa12.7□□□□□ -0.38
INO80E-203ENST00000540562 LRP12Q9Y561 859 aa12.7□□□□□ -0.38
INO80E-203ENST00000540562 RALGAPA1Q6GYQ0 2036 aa12.7□□□□□ -0.38
INO80E-203ENST00000540562 TMED7-TICAM2A0A0A6YYA0 188 aa12.7□□□□□ -0.38
INO80E-203ENST00000540562 A0A1W2PPC4 97 aa12.7□□□□□ -0.38
INO80E-203ENST00000540562 OR5K4A6NMS3 321 aa12.7□□□□□ -0.38
INO80E-203ENST00000540562 GP1BBP13224 206 aa12.7□□□□□ -0.38
INO80E-203ENST00000540562 IFNGR1P15260 489 aa12.7□□□□□ -0.38
INO80E-203ENST00000540562 PRKACBP22694 351 aa12.7□□□□□ -0.38
INO80E-203ENST00000540562 ABCD3P28288 659 aa12.7□□□□□ -0.38
INO80E-203ENST00000540562 PSMD4P55036 377 aaKnown RBP12.7□□□□□ -0.38
INO80E-203ENST00000540562 SKP1P63208 163 aa12.7□□□□□ -0.38
INO80E-203ENST00000540562 TAF13Q15543 124 aa12.7□□□□□ -0.38
INO80E-203ENST00000540562 TUSC1Q2TAM9 212 aa12.7□□□□□ -0.38
INO80E-203ENST00000540562 STPG2Q8N412 459 aa12.7□□□□□ -0.38
INO80E-203ENST00000540562 RBPMSQ93062 196 aaKnown RBP12.7□□□□□ -0.38
INO80E-203ENST00000540562 HGDQ93099 445 aa12.7□□□□□ -0.38
INO80E-203ENST00000540562 C8orf44Q96CB5 159 aa12.7□□□□□ -0.38
INO80E-203ENST00000540562 FOXQ1Q9C009 403 aa12.7□□□□□ -0.38
INO80E-203ENST00000540562 FSCN3Q9NQT6 498 aa12.7□□□□□ -0.38
INO80E-203ENST00000540562 SDHAF2Q9NX18 166 aa12.7□□□□□ -0.38
INO80E-203ENST00000540562 TMED7Q9Y3B3 224 aa12.7□□□□□ -0.38
INO80E-203ENST00000540562 MAP1BP46821 2468 aaKnown RBP12.7□□□□□ -0.38
INO80E-203ENST00000540562 METTL12A8MUP2 240 aa12.7□□□□□ -0.38
INO80E-203ENST00000540562 SRPX2O60687 465 aaPredicted RBP12.7□□□□□ -0.38
INO80E-203ENST00000540562 RLN2P04090 185 aa12.7□□□□□ -0.38
INO80E-203ENST00000540562 PI3P19957 117 aa12.7□□□□□ -0.38
INO80E-203ENST00000540562 MAPK3P27361 379 aaPredicted RBP12.7□□□□□ -0.38
INO80E-203ENST00000540562 HSD17B7P56937 341 aa12.7□□□□□ -0.38
INO80E-203ENST00000540562 ZNF626Q68DY1 528 aa12.7□□□□□ -0.38
INO80E-203ENST00000540562 STEAP1BQ6NZ63 245 aa12.7□□□□□ -0.38
INO80E-203ENST00000540562 SDR16C5Q8N3Y7 309 aa12.7□□□□□ -0.38
INO80E-203ENST00000540562 OR5D18Q8NGL1 313 aa12.7□□□□□ -0.38
INO80E-203ENST00000540562 OR1L3Q8NH93 324 aa12.7□□□□□ -0.38
INO80E-203ENST00000540562 DCBLD2Q96PD2 775 aa12.7□□□□□ -0.38
INO80E-203ENST00000540562 NPDC1Q9NQX5 325 aaPredicted RBP12.7□□□□□ -0.38
INO80E-203ENST00000540562 LANCL2Q9NS86 450 aa12.7□□□□□ -0.38
INO80E-203ENST00000540562 FER1L5A0AVI2 2057 aa12.69□□□□□ -0.38
INO80E-203ENST00000540562 PRSS37A4D1T9 235 aa12.69□□□□□ -0.38
INO80E-203ENST00000540562 MCRIP1C9JLW8 97 aa12.69□□□□□ -0.38
INO80E-203ENST00000540562 ZNF749O43361 778 aa12.69□□□□□ -0.38
INO80E-203ENST00000540562 GDF9O60383 454 aa12.69□□□□□ -0.38
INO80E-203ENST00000540562 RAB3DO95716 219 aa12.69□□□□□ -0.38
INO80E-203ENST00000540562 MRPS21P82921 87 aaKnown RBP12.69□□□□□ -0.38
INO80E-203ENST00000540562 DMWDQ09019 674 aa12.69□□□□□ -0.38
INO80E-203ENST00000540562 CCINQ13939 588 aa12.69□□□□□ -0.38
INO80E-203ENST00000540562 HLXQ14774 488 aaPredicted RBP12.69□□□□□ -0.38
INO80E-203ENST00000540562 SLC17A1Q14916 467 aa12.69□□□□□ -0.38
INO80E-203ENST00000540562 EEF1A1P5Q5VTE0 462 aa12.69□□□□□ -0.38
INO80E-203ENST00000540562 EXD3Q8N9H8 876 aa12.69□□□□□ -0.38
INO80E-203ENST00000540562 SLC6A7Q99884 636 aa12.69□□□□□ -0.38
INO80E-203ENST00000540562 ZCCHC4Q9H5U6 513 aa12.69□□□□□ -0.38
INO80E-203ENST00000540562 NOP16Q9Y3C1 178 aaKnown RBP12.69□□□□□ -0.38
INO80E-203ENST00000540562 HS3ST3A1Q9Y663 406 aa12.69□□□□□ -0.38
INO80E-203ENST00000540562 F5H5P2 479 aa12.69□□□□□ -0.38
INO80E-203ENST00000540562 XRCC3O43542 346 aa12.69□□□□□ -0.38
INO80E-203ENST00000540562 IL33O95760 270 aa12.69□□□□□ -0.38
INO80E-203ENST00000540562 TGM6O95932 706 aa12.69□□□□□ -0.38
INO80E-203ENST00000540562 HOXC4P09017 264 aaPredicted RBP12.69□□□□□ -0.38
INO80E-203ENST00000540562 RAB40ALP0C0E4 278 aa12.69□□□□□ -0.38
INO80E-203ENST00000540562 CDAP32320 146 aa12.69□□□□□ -0.38
INO80E-203ENST00000540562 RBMS2Q15434 407 aaKnown RBP12.69□□□□□ -0.38
INO80E-203ENST00000540562 CDNFQ49AH0 187 aa12.69□□□□□ -0.38
INO80E-203ENST00000540562 MANEAQ5SRI9 462 aa12.69□□□□□ -0.38
INO80E-203ENST00000540562 TMUB2Q71RG4 321 aa12.69□□□□□ -0.38
INO80E-203ENST00000540562 RAB40AQ8WXH6 277 aa12.69□□□□□ -0.38
INO80E-203ENST00000540562 WNT2BQ93097 391 aa12.69□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 71.8 ms