RNA–Protein interactions for RNA: ENST00000540166.5

DDB1-217, Transcript of damage specific DNA binding protein 1, humanhuman

TSL 2

Gene DDB1, Length 3,906 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDB1-217ENST00000540166 ZNF761Q86XN6 746 aaPredicted RBP7.92□□□□□ -1.14
DDB1-217ENST00000540166 ZNF383Q8NA42 475 aa7.92□□□□□ -1.14
DDB1-217ENST00000540166 GOT1L1Q8NHS2 421 aaPredicted RBP7.92□□□□□ -1.14
DDB1-217ENST00000540166 TSEN15Q8WW01 171 aaKnown RBP7.92□□□□□ -1.14
DDB1-217ENST00000540166 ASB13Q8WXK3 278 aa7.92□□□□□ -1.14
DDB1-217ENST00000540166 DVL3Q92997 716 aaPredicted RBP7.92□□□□□ -1.14
DDB1-217ENST00000540166 ORAI1Q96D31 301 aa7.92□□□□□ -1.14
DDB1-217ENST00000540166 ZMYND19Q96E35 227 aaPredicted RBP7.92□□□□□ -1.14
DDB1-217ENST00000540166 RHOVQ96L33 236 aa7.92□□□□□ -1.14
DDB1-217ENST00000540166 PHB2Q99623 299 aa7.92□□□□□ -1.14
DDB1-217ENST00000540166 POFUT1Q9H488 388 aa7.92□□□□□ -1.14
DDB1-217ENST00000540166 PDE7BQ9NP56 450 aa7.92□□□□□ -1.14
DDB1-217ENST00000540166 C17orf113A0A1B0GUU1 675 aa7.92□□□□□ -1.14
DDB1-217ENST00000540166 C9J4A7 227 aa7.92□□□□□ -1.14
DDB1-217ENST00000540166 IFNA10P01566 189 aa7.92□□□□□ -1.14
DDB1-217ENST00000540166 SRMP19623 302 aa7.92□□□□□ -1.14
DDB1-217ENST00000540166 LAP3P28838 519 aa7.92□□□□□ -1.14
DDB1-217ENST00000540166 RPS15P62841 145 aaKnown RBP7.92□□□□□ -1.14
DDB1-217ENST00000540166 LSM11P83369 360 aaKnown RBP eCLIP7.92□□□□□ -1.14
DDB1-217ENST00000540166 PJVKQ0ZLH3 352 aa7.92□□□□□ -1.14
DDB1-217ENST00000540166 TMEM52BQ4KMG9 183 aa7.92□□□□□ -1.14
DDB1-217ENST00000540166 C11orf87Q6NUJ2 197 aa7.92□□□□□ -1.14
DDB1-217ENST00000540166 OVCH1Q7RTY7 1134 aa7.92□□□□□ -1.14
DDB1-217ENST00000540166 KCNRGQ8N5I3 272 aa7.92□□□□□ -1.14
DDB1-217ENST00000540166 C10orf53Q8N6V4 93 aa7.92□□□□□ -1.14
DDB1-217ENST00000540166 OR4C16Q8NGL9 310 aa7.92□□□□□ -1.14
DDB1-217ENST00000540166 PPP1R1CQ8WVI7 109 aa7.92□□□□□ -1.14
DDB1-217ENST00000540166 ALG14Q96F25 216 aa7.92□□□□□ -1.14
DDB1-217ENST00000540166 SLC41A3Q96GZ6 507 aa7.92□□□□□ -1.14
DDB1-217ENST00000540166 LYSMD1Q96S90 227 aa7.92□□□□□ -1.14
DDB1-217ENST00000540166 PDCD1LG2Q9BQ51 273 aa7.92□□□□□ -1.14
DDB1-217ENST00000540166 SARGQ9BW04 601 aa7.92□□□□□ -1.14
DDB1-217ENST00000540166 UBQLN3Q9H347 655 aa7.92□□□□□ -1.14
DDB1-217ENST00000540166 MBNL1Q9NR56 388 aaKnown RBP7.92□□□□□ -1.14
DDB1-217ENST00000540166 TAAR2Q9P1P5 351 aa7.92□□□□□ -1.14
DDB1-217ENST00000540166 ANKRD36A6QL64 1941 aa7.92□□□□□ -1.14
DDB1-217ENST00000540166 ARID1BQ8NFD5 2236 aaPredicted RBP7.91□□□□□ -1.14
DDB1-217ENST00000540166 TRAV1-2A0A0B4J238 106 aa7.91□□□□□ -1.14
DDB1-217ENST00000540166 ANKRD20A5PA0PJZ0 165 aa7.91□□□□□ -1.14
DDB1-217ENST00000540166 FOXE1O00358 373 aaPredicted RBP7.91□□□□□ -1.14
DDB1-217ENST00000540166 TERTO14746 1132 aaKnown RBP7.91□□□□□ -1.14
DDB1-217ENST00000540166 LATO43561 262 aa7.91□□□□□ -1.14
DDB1-217ENST00000540166 PLPP2O43688 288 aa7.91□□□□□ -1.14
DDB1-217ENST00000540166 SFTA3P0C7M3 94 aa7.91□□□□□ -1.14
DDB1-217ENST00000540166 GAAP10253 952 aa7.91□□□□□ -1.14
DDB1-217ENST00000540166 IGFALSP35858 605 aa7.91□□□□□ -1.14
DDB1-217ENST00000540166 LTBQ06643 244 aa7.91□□□□□ -1.14
DDB1-217ENST00000540166 ZNF616Q08AN1 781 aa7.91□□□□□ -1.14
DDB1-217ENST00000540166 FZD2Q14332 565 aa7.91□□□□□ -1.14
DDB1-217ENST00000540166 HMGN3Q15651 99 aa7.91□□□□□ -1.14
DDB1-217ENST00000540166 STEAP1BQ6NZ63 245 aa7.91□□□□□ -1.14
DDB1-217ENST00000540166 TTLL10Q6ZVT0 673 aa7.91□□□□□ -1.14
DDB1-217ENST00000540166 NR2C2APQ86WQ0 139 aa7.91□□□□□ -1.14
DDB1-217ENST00000540166 C17orf47Q8NEP4 570 aa7.91□□□□□ -1.14
DDB1-217ENST00000540166 LCORQ96JN0 433 aaPredicted RBP7.91□□□□□ -1.14
DDB1-217ENST00000540166 TGM7Q96PF1 710 aa7.91□□□□□ -1.14
DDB1-217ENST00000540166 FN3KRPQ9HA64 309 aa7.91□□□□□ -1.14
DDB1-217ENST00000540166 MMP26Q9NRE1 261 aa7.91□□□□□ -1.14
DDB1-217ENST00000540166 KPTNQ9Y664 436 aa7.91□□□□□ -1.14
DDB1-217ENST00000540166 SIRT4Q9Y6E7 314 aaPredicted RBP7.91□□□□□ -1.14
DDB1-217ENST00000540166 NBASA2RRP1 2371 aa7.91□□□□□ -1.14
DDB1-217ENST00000540166 A0A087X0M5 115 aa7.91□□□□□ -1.14
DDB1-217ENST00000540166 A0A1B0GX30 115 aa7.91□□□□□ -1.14
DDB1-217ENST00000540166 ELOA3DA6NLF2 546 aaPredicted RBP7.91□□□□□ -1.14
DDB1-217ENST00000540166 IFITM5A6NNB3 132 aa7.91□□□□□ -1.14
DDB1-217ENST00000540166 TNFRSF10CO14798 259 aa7.91□□□□□ -1.14
DDB1-217ENST00000540166 PPP1R2P9O14990 202 aa7.91□□□□□ -1.14
DDB1-217ENST00000540166 G0S2P27469 103 aa7.91□□□□□ -1.14
DDB1-217ENST00000540166 S100A10P60903 97 aa7.91□□□□□ -1.14
DDB1-217ENST00000540166 SIRPAP78324 504 aa7.91□□□□□ -1.14
DDB1-217ENST00000540166 ODF4Q2M2E3 257 aa7.91□□□□□ -1.14
DDB1-217ENST00000540166 GFOD2Q3B7J2 385 aa7.91□□□□□ -1.14
DDB1-217ENST00000540166 ELOA3BQ3SY89 546 aa7.91□□□□□ -1.14
DDB1-217ENST00000540166 YOD1Q5VVQ6 348 aaPredicted RBP7.91□□□□□ -1.14
DDB1-217ENST00000540166 LPCAT3Q6P1A2 487 aa7.91□□□□□ -1.14
DDB1-217ENST00000540166 TMPRSS7Q7RTY8 843 aa7.91□□□□□ -1.14
DDB1-217ENST00000540166 CHST4Q8NCG5 386 aa7.91□□□□□ -1.14
DDB1-217ENST00000540166 ELOA3Q8NG57 546 aa7.91□□□□□ -1.14
DDB1-217ENST00000540166 OR4K17Q8NGC6 315 aa7.91□□□□□ -1.14
DDB1-217ENST00000540166 MFSD8Q8NHS3 518 aa7.91□□□□□ -1.14
DDB1-217ENST00000540166 LCN9Q8WX39 176 aa7.91□□□□□ -1.14
DDB1-217ENST00000540166 NKD1Q969G9 470 aa7.91□□□□□ -1.14
DDB1-217ENST00000540166 ZNF514Q96K75 400 aaPredicted RBP7.91□□□□□ -1.14
DDB1-217ENST00000540166 CLCC1Q96S66 551 aa7.91□□□□□ -1.14
DDB1-217ENST00000540166 COMMD4Q9H0A8 199 aa7.91□□□□□ -1.14
DDB1-217ENST00000540166 PRO1933Q9H354 126 aa7.91□□□□□ -1.14
DDB1-217ENST00000540166 KCNJ16Q9NPI9 418 aa7.91□□□□□ -1.14
DDB1-217ENST00000540166 EXOGQ9Y2C4 368 aaKnown RBP7.91□□□□□ -1.14
DDB1-217ENST00000540166 EFCAB7A8K855 629 aa7.91□□□□□ -1.14
DDB1-217ENST00000540166 RNASEK-C17orf49H0YIS7 233 aa7.91□□□□□ -1.14
DDB1-217ENST00000540166 IFNA2P01563 188 aa7.91□□□□□ -1.14
DDB1-217ENST00000540166 TACSTD2P09758 323 aa7.91□□□□□ -1.14
DDB1-217ENST00000540166 OR4E1P0C645 316 aa7.91□□□□□ -1.14
DDB1-217ENST00000540166 TCN2P20062 427 aa7.91□□□□□ -1.14
DDB1-217ENST00000540166 NME2P22392 152 aa7.91□□□□□ -1.14
DDB1-217ENST00000540166 MPGP29372 298 aa7.91□□□□□ -1.14
DDB1-217ENST00000540166 RBP2P50120 134 aa7.91□□□□□ -1.14
DDB1-217ENST00000540166 IL13RA1P78552 427 aa7.91□□□□□ -1.14
DDB1-217ENST00000540166 NKPD1Q17RQ9 610 aa7.91□□□□□ -1.14
DDB1-217ENST00000540166 PDZD11Q5EBL8 140 aa7.91□□□□□ -1.14
Retrieved 100 of 20,778 RNA–protein pairs in 27.3 ms