RNA–Protein interactions for RNA: ENST00000539320.2

SCARB1-206, Transcript of scavenger receptor class B member 1, humanhuman

TSL 2

Gene SCARB1, Length 720 nt, Biotype processed transcript, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARB1-206ENST00000539320 YIPF5Q969M3 257 aa19■□□□□ 0.63
SCARB1-206ENST00000539320 FAM162AQ96A26 154 aa19■□□□□ 0.63
SCARB1-206ENST00000539320 C1orf159Q96HA4 380 aa19■□□□□ 0.63
SCARB1-206ENST00000539320 TSPAN32Q96QS1 320 aa19■□□□□ 0.63
SCARB1-206ENST00000539320 RBP7Q96R05 134 aa19■□□□□ 0.63
SCARB1-206ENST00000539320 HINT3Q9NQE9 182 aaKnown RBP19■□□□□ 0.63
SCARB1-206ENST00000539320 A0A087WUU8 490 aa18.99■□□□□ 0.63
SCARB1-206ENST00000539320 C17orf100A8MU93 164 aa18.99■□□□□ 0.63
SCARB1-206ENST00000539320 PRSS23O95084 383 aa18.99■□□□□ 0.63
SCARB1-206ENST00000539320 CCNOP22674 350 aa18.99■□□□□ 0.63
SCARB1-206ENST00000539320 COL8A2P25067 703 aa18.99■□□□□ 0.63
SCARB1-206ENST00000539320 STOMP27105 288 aa18.99■□□□□ 0.63
SCARB1-206ENST00000539320 ERVK-25P63136 954 aa18.99■□□□□ 0.63
SCARB1-206ENST00000539320 TMEM154Q6P9G4 183 aa18.99■□□□□ 0.63
SCARB1-206ENST00000539320 OAFQ86UD1 273 aa18.99■□□□□ 0.63
SCARB1-206ENST00000539320 RNF113BQ8IZP6 322 aaKnown RBP18.99■□□□□ 0.63
SCARB1-206ENST00000539320 KCTD14Q9BQ13 255 aaPredicted RBP18.99■□□□□ 0.63
SCARB1-206ENST00000539320 REPIN1Q9BWE0 567 aaKnown RBP18.99■□□□□ 0.63
SCARB1-206ENST00000539320 ZNF416Q9BWM5 594 aa18.99■□□□□ 0.63
SCARB1-206ENST00000539320 ZNF275Q9NSD4 429 aaPredicted RBP18.99■□□□□ 0.63
SCARB1-206ENST00000539320 DYNC1I1O14576 645 aa18.98■□□□□ 0.63
SCARB1-206ENST00000539320 MAGEB1P43366 347 aa18.98■□□□□ 0.63
SCARB1-206ENST00000539320 GPR4P46093 362 aa18.98■□□□□ 0.63
SCARB1-206ENST00000539320 GDI2P50395 445 aaKnown RBP18.98■□□□□ 0.63
SCARB1-206ENST00000539320 GLO1Q04760 184 aa18.98■□□□□ 0.63
SCARB1-206ENST00000539320 FHL1Q13642 323 aa18.98■□□□□ 0.63
SCARB1-206ENST00000539320 PCGF3Q3KNV8 242 aa18.98■□□□□ 0.63
SCARB1-206ENST00000539320 FAM27BQ5VT28 67 aa18.98■□□□□ 0.63
SCARB1-206ENST00000539320 FOXL2NBQ6ZUU3 175 aa18.98■□□□□ 0.63
SCARB1-206ENST00000539320 MBOAT2Q6ZWT7 520 aa18.98■□□□□ 0.63
SCARB1-206ENST00000539320 CYP4Z1Q86W10 505 aa18.98■□□□□ 0.63
SCARB1-206ENST00000539320 FAM156AQ8NDB6 213 aa18.98■□□□□ 0.63
SCARB1-206ENST00000539320 OR1J1Q8NGS3 322 aa18.98■□□□□ 0.63
SCARB1-206ENST00000539320 AKR7LQ8NHP1 331 aa18.98■□□□□ 0.63
SCARB1-206ENST00000539320 CLDND2Q8NHS1 167 aa18.98■□□□□ 0.63
SCARB1-206ENST00000539320 POM121L2Q96KW2 1035 aa18.98■□□□□ 0.63
SCARB1-206ENST00000539320 ANKRD19PQ9H560 264 aa18.98■□□□□ 0.63
SCARB1-206ENST00000539320 NARFLQ9H6Q4 476 aa18.98■□□□□ 0.63
SCARB1-206ENST00000539320 ABCD2Q9UBJ2 740 aa18.98■□□□□ 0.63
SCARB1-206ENST00000539320 A0A1W2PPL8 197 aa18.97■□□□□ 0.63
SCARB1-206ENST00000539320 RP2O75695 350 aa18.97■□□□□ 0.63
SCARB1-206ENST00000539320 CST2P09228 141 aa18.97■□□□□ 0.63
SCARB1-206ENST00000539320 NCK1P16333 377 aa18.97■□□□□ 0.63
SCARB1-206ENST00000539320 DRD4P21917 467 aa18.97■□□□□ 0.63
SCARB1-206ENST00000539320 LAP3P28838 519 aa18.97■□□□□ 0.63
SCARB1-206ENST00000539320 WNT5AP41221 380 aa18.97■□□□□ 0.63
SCARB1-206ENST00000539320 TMEM33P57088 247 aa18.97■□□□□ 0.63
SCARB1-206ENST00000539320 PSG4Q00888 419 aa18.97■□□□□ 0.63
SCARB1-206ENST00000539320 OR2H1Q9GZK4 316 aa18.97■□□□□ 0.63
SCARB1-206ENST00000539320 NDEL1Q9GZM8 345 aa18.97■□□□□ 0.63
SCARB1-206ENST00000539320 RACGAP1Q9H0H5 632 aa18.97■□□□□ 0.63
SCARB1-206ENST00000539320 ENPP4Q9Y6X5 453 aa18.97■□□□□ 0.63
SCARB1-206ENST00000539320 C5orf49A4QMS7 147 aa18.96■□□□□ 0.63
SCARB1-206ENST00000539320 H7C1C5 153 aa18.96■□□□□ 0.63
SCARB1-206ENST00000539320 CDC42EP2O14613 210 aa18.96■□□□□ 0.63
SCARB1-206ENST00000539320 PPIHO43447 177 aaKnown RBP18.96■□□□□ 0.63
SCARB1-206ENST00000539320 TFP02787 698 aa18.96■□□□□ 0.63
SCARB1-206ENST00000539320 MT-ND5P03915 603 aa18.96■□□□□ 0.63
SCARB1-206ENST00000539320 MSR1P21757 451 aa18.96■□□□□ 0.63
SCARB1-206ENST00000539320 RPL4P36578 427 aaKnown RBP18.96■□□□□ 0.63
SCARB1-206ENST00000539320 GUCA1AP43080 201 aaPredicted RBP18.96■□□□□ 0.63
SCARB1-206ENST00000539320 DVL1P1P54792 670 aaPredicted RBP18.96■□□□□ 0.63
SCARB1-206ENST00000539320 PSME3P61289 254 aa18.96■□□□□ 0.63
SCARB1-206ENST00000539320 LCN6P62502 163 aa18.96■□□□□ 0.63
SCARB1-206ENST00000539320 MOGQ16653 247 aa18.96■□□□□ 0.63
SCARB1-206ENST00000539320 TBPL2Q6SJ96 375 aa18.96■□□□□ 0.63
SCARB1-206ENST00000539320 UNQ6126/PRO20091Q6UXV3 157 aa18.96■□□□□ 0.63
SCARB1-206ENST00000539320 TMPRSS11FQ6ZWK6 438 aa18.96■□□□□ 0.63
SCARB1-206ENST00000539320 ZNF101Q8IZC7 436 aa18.96■□□□□ 0.63
SCARB1-206ENST00000539320 WNT5BQ9H1J7 359 aa18.96■□□□□ 0.63
SCARB1-206ENST00000539320 NKIRAS2Q9NYR9 191 aa18.96■□□□□ 0.63
SCARB1-206ENST00000539320 EIF3KQ9UBQ5 218 aaKnown RBP18.96■□□□□ 0.63
SCARB1-206ENST00000539320 RPS6KA6Q9UK32 745 aa18.96■□□□□ 0.63
SCARB1-206ENST00000539320 TMEM5Q9Y2B1 443 aa18.96■□□□□ 0.63
SCARB1-206ENST00000539320 LOC100509620A0A075B734 347 aa18.95■□□□□ 0.62
SCARB1-206ENST00000539320 B4DSR2 109 aa18.95■□□□□ 0.62
SCARB1-206ENST00000539320 IGHV3-13P01766 116 aa18.95■□□□□ 0.62
SCARB1-206ENST00000539320 CD14P08571 375 aa18.95■□□□□ 0.62
SCARB1-206ENST00000539320 PCMT1P22061 227 aa18.95■□□□□ 0.62
SCARB1-206ENST00000539320 PCBD1P61457 104 aa18.95■□□□□ 0.62
SCARB1-206ENST00000539320 CCL8P80075 99 aa18.95■□□□□ 0.62
SCARB1-206ENST00000539320 KRTAP24-1Q3LI83 254 aa18.95■□□□□ 0.62
SCARB1-206ENST00000539320 SPATA46Q5T0L3 261 aa18.95■□□□□ 0.62
SCARB1-206ENST00000539320 RFPL4BQ6ZWI9 263 aa18.95■□□□□ 0.62
SCARB1-206ENST00000539320 RRM2BQ7LG56 351 aa18.95■□□□□ 0.62
SCARB1-206ENST00000539320 ALDH16A1Q8IZ83 802 aa18.95■□□□□ 0.62
SCARB1-206ENST00000539320 GTF3AQ92664 365 aaKnown RBP18.95■□□□□ 0.62
SCARB1-206ENST00000539320 CMTM5Q96DZ9 223 aa18.95■□□□□ 0.62
SCARB1-206ENST00000539320 MYLK2Q9H1R3 596 aa18.95■□□□□ 0.62
SCARB1-206ENST00000539320 NMNAT1Q9HAN9 279 aaPredicted RBP18.95■□□□□ 0.62
SCARB1-206ENST00000539320 TMEFF2Q9UIK5 374 aaPredicted RBP18.95■□□□□ 0.62
SCARB1-206ENST00000539320 ADAM18Q9Y3Q7 739 aa18.95■□□□□ 0.62
SCARB1-206ENST00000539320 CDC14BO60729 498 aa18.94■□□□□ 0.62
SCARB1-206ENST00000539320 GCH1P30793 250 aa18.94■□□□□ 0.62
SCARB1-206ENST00000539320 ENDOGQ14249 297 aaKnown RBP18.94■□□□□ 0.62
SCARB1-206ENST00000539320 ZNF718Q3SXZ3 478 aa18.94■□□□□ 0.62
SCARB1-206ENST00000539320 ZBED5Q49AG3 693 aa18.94■□□□□ 0.62
SCARB1-206ENST00000539320 TSEN54Q7Z6J9 526 aaKnown RBP18.94■□□□□ 0.62
SCARB1-206ENST00000539320 GLCCI1Q86VQ1 547 aa18.94■□□□□ 0.62
SCARB1-206ENST00000539320 SLC7A13Q8TCU3 470 aa18.94■□□□□ 0.62
Retrieved 100 of 20,778 RNA–protein pairs in 58.5 ms