RNA–Protein interactions for RNA: ENST00000538809.6

RAB40B-202, Transcript of RAB40B, member RAS oncogene family, humanhuman

TSL 2 BASIC

Gene RAB40B, Length 704 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB40B-202ENST00000538809 A0A1W2PPL8 197 aa12.83□□□□□ -0.36
RAB40B-202ENST00000538809 DYNC1I1O14576 645 aa12.83□□□□□ -0.36
RAB40B-202ENST00000538809 ARPC2O15144 300 aa12.83□□□□□ -0.36
RAB40B-202ENST00000538809 PTP4A3O75365 173 aa12.83□□□□□ -0.36
RAB40B-202ENST00000538809 NCR1O76036 304 aa12.83□□□□□ -0.36
RAB40B-202ENST00000538809 DIRAS1O95057 198 aa12.83□□□□□ -0.36
RAB40B-202ENST00000538809 HPXP02790 462 aa12.83□□□□□ -0.36
RAB40B-202ENST00000538809 LCKP06239 509 aa12.83□□□□□ -0.36
RAB40B-202ENST00000538809 CCNOP22674 350 aa12.83□□□□□ -0.36
RAB40B-202ENST00000538809 APLNRP35414 380 aa12.83□□□□□ -0.36
RAB40B-202ENST00000538809 MSX2P35548 267 aaPredicted RBP12.83□□□□□ -0.36
RAB40B-202ENST00000538809 OMPP47874 163 aa12.83□□□□□ -0.36
RAB40B-202ENST00000538809 ERVK-25P63136 954 aa12.83□□□□□ -0.36
RAB40B-202ENST00000538809 KRT72Q14CN4 511 aa12.83□□□□□ -0.36
RAB40B-202ENST00000538809 SEC23BQ15437 767 aa12.83□□□□□ -0.36
RAB40B-202ENST00000538809 ZBED5Q49AG3 693 aa12.83□□□□□ -0.36
RAB40B-202ENST00000538809 ELFN2Q5R3F8 820 aa12.83□□□□□ -0.36
RAB40B-202ENST00000538809 FAM205BPQ63HN1 556 aa12.83□□□□□ -0.36
RAB40B-202ENST00000538809 FAM166AQ6J272 317 aa12.83□□□□□ -0.36
RAB40B-202ENST00000538809 FAM122BQ7Z309 247 aa12.83□□□□□ -0.36
RAB40B-202ENST00000538809 FITM2Q8N6M3 262 aa12.83□□□□□ -0.36
RAB40B-202ENST00000538809 ZNF540Q8NDQ6 660 aa12.83□□□□□ -0.36
RAB40B-202ENST00000538809 CPEB3Q8NE35 698 aaKnown RBP12.83□□□□□ -0.36
RAB40B-202ENST00000538809 AKR7LQ8NHP1 331 aa12.83□□□□□ -0.36
RAB40B-202ENST00000538809 PYURFQ96I23 114 aa12.83□□□□□ -0.36
RAB40B-202ENST00000538809 KCNN2Q9H2S1 579 aa12.83□□□□□ -0.36
RAB40B-202ENST00000538809 SIAEQ9HAT2 523 aa12.83□□□□□ -0.36
RAB40B-202ENST00000538809 TAAR3PQ9P1P4 343 aa12.83□□□□□ -0.36
RAB40B-202ENST00000538809 KCNS2Q9ULS6 477 aa12.83□□□□□ -0.36
RAB40B-202ENST00000538809 SIGLEC7Q9Y286 467 aa12.83□□□□□ -0.36
RAB40B-202ENST00000538809 TMEM5Q9Y2B1 443 aa12.83□□□□□ -0.36
RAB40B-202ENST00000538809 ADAM18Q9Y3Q7 739 aa12.83□□□□□ -0.36
RAB40B-202ENST00000538809 V9GYQ6 96 aa12.83□□□□□ -0.36
RAB40B-202ENST00000538809 COL6A5A8TX70 2615 aa12.83□□□□□ -0.36
RAB40B-202ENST00000538809 MXRA5Q9NR99 2828 aa12.82□□□□□ -0.36
RAB40B-202ENST00000538809 SLC22A23A1A5C7 686 aa12.82□□□□□ -0.36
RAB40B-202ENST00000538809 LILRA1O75019 489 aa12.82□□□□□ -0.36
RAB40B-202ENST00000538809 SNAP29O95721 258 aa12.82□□□□□ -0.36
RAB40B-202ENST00000538809 PTHP01270 115 aa12.82□□□□□ -0.36
RAB40B-202ENST00000538809 CD14P08571 375 aa12.82□□□□□ -0.36
RAB40B-202ENST00000538809 FAM157CP0CG43 387 aa12.82□□□□□ -0.36
RAB40B-202ENST00000538809 NR2C1P13056 603 aa12.82□□□□□ -0.36
RAB40B-202ENST00000538809 RPL4P36578 427 aaKnown RBP12.82□□□□□ -0.36
RAB40B-202ENST00000538809 CHN2P52757 468 aa12.82□□□□□ -0.36
RAB40B-202ENST00000538809 KLF3P57682 345 aaPredicted RBP12.82□□□□□ -0.36
RAB40B-202ENST00000538809 FXYD6P3P58550 94 aa12.82□□□□□ -0.36
RAB40B-202ENST00000538809 GLO1Q04760 184 aa12.82□□□□□ -0.36
RAB40B-202ENST00000538809 RIN1Q13671 783 aa12.82□□□□□ -0.36
RAB40B-202ENST00000538809 CCNIQ14094 377 aa12.82□□□□□ -0.36
RAB40B-202ENST00000538809 NKPD1Q17RQ9 610 aa12.82□□□□□ -0.36
RAB40B-202ENST00000538809 SPATS1Q496A3 300 aa12.82□□□□□ -0.36
RAB40B-202ENST00000538809 FGD3Q5JSP0 725 aa12.82□□□□□ -0.36
RAB40B-202ENST00000538809 THEM4Q5T1C6 240 aa12.82□□□□□ -0.36
RAB40B-202ENST00000538809 C16orf89Q6UX73 402 aa12.82□□□□□ -0.36
RAB40B-202ENST00000538809 CXXC5Q7LFL8 322 aaKnown RBP12.82□□□□□ -0.36
RAB40B-202ENST00000538809 DEFB107AQ8IZN7 70 aa12.82□□□□□ -0.36
RAB40B-202ENST00000538809 OR1J2Q8NGS2 313 aa12.82□□□□□ -0.36
RAB40B-202ENST00000538809 FNDC8Q8TC99 324 aa12.82□□□□□ -0.36
RAB40B-202ENST00000538809 GTF3AQ92664 365 aaKnown RBP12.82□□□□□ -0.36
RAB40B-202ENST00000538809 FAM46AQ96IP4 442 aaKnown RBP12.82□□□□□ -0.36
RAB40B-202ENST00000538809 GPX7Q96SL4 187 aaPredicted RBP12.82□□□□□ -0.36
RAB40B-202ENST00000538809 BEX2Q9BXY8 128 aa12.82□□□□□ -0.36
RAB40B-202ENST00000538809 SHARPINQ9H0F6 387 aa12.82□□□□□ -0.36
RAB40B-202ENST00000538809 MS4A5Q9H3V2 200 aa12.82□□□□□ -0.36
RAB40B-202ENST00000538809 TMEM160Q9NX00 188 aa12.82□□□□□ -0.36
RAB40B-202ENST00000538809 A6NIZ1 184 aa12.81□□□□□ -0.36
RAB40B-202ENST00000538809 TGFAP01135 160 aa12.81□□□□□ -0.36
RAB40B-202ENST00000538809 IFNA2P01563 188 aa12.81□□□□□ -0.36
RAB40B-202ENST00000538809 TACSTD2P09758 323 aa12.81□□□□□ -0.36
RAB40B-202ENST00000538809 COL8A2P25067 703 aa12.81□□□□□ -0.36
RAB40B-202ENST00000538809 STOMP27105 288 aa12.81□□□□□ -0.36
RAB40B-202ENST00000538809 LAP3P28838 519 aa12.81□□□□□ -0.36
RAB40B-202ENST00000538809 MAGEB1P43366 347 aa12.81□□□□□ -0.36
RAB40B-202ENST00000538809 UCP2P55851 309 aa12.81□□□□□ -0.36
RAB40B-202ENST00000538809 RAP1BP61224 184 aa12.81□□□□□ -0.36
RAB40B-202ENST00000538809 RAP1AP62834 184 aa12.81□□□□□ -0.36
RAB40B-202ENST00000538809 PSG4Q00888 419 aa12.81□□□□□ -0.36
RAB40B-202ENST00000538809 MESTQ5EB52 335 aa12.81□□□□□ -0.36
RAB40B-202ENST00000538809 SPATA46Q5T0L3 261 aa12.81□□□□□ -0.36
RAB40B-202ENST00000538809 FAM27BQ5VT28 67 aa12.81□□□□□ -0.36
RAB40B-202ENST00000538809 OR1J1Q8NGS3 322 aa12.81□□□□□ -0.36
RAB40B-202ENST00000538809 SYNPRQ8TBG9 265 aa12.81□□□□□ -0.36
RAB40B-202ENST00000538809 YIPF5Q969M3 257 aa12.81□□□□□ -0.36
RAB40B-202ENST00000538809 Q96M85 177 aa12.81□□□□□ -0.36
RAB40B-202ENST00000538809 NSMCE2Q96MF7 247 aa12.81□□□□□ -0.36
RAB40B-202ENST00000538809 RBP7Q96R05 134 aa12.81□□□□□ -0.36
RAB40B-202ENST00000538809 GPA33Q99795 319 aa12.81□□□□□ -0.36
RAB40B-202ENST00000538809 WNT5BQ9H1J7 359 aa12.81□□□□□ -0.36
RAB40B-202ENST00000538809 LRMDAQ9H2I8 198 aa12.81□□□□□ -0.36
RAB40B-202ENST00000538809 NARFLQ9H6Q4 476 aa12.81□□□□□ -0.36
RAB40B-202ENST00000538809 NDE1Q9NXR1 346 aa12.81□□□□□ -0.36
RAB40B-202ENST00000538809 FAM53CQ9NYF3 392 aa12.81□□□□□ -0.36
RAB40B-202ENST00000538809 FAM32AQ9Y421 112 aaKnown RBP12.81□□□□□ -0.36
RAB40B-202ENST00000538809 IGLV3-9A0A075B6K5 115 aa12.8□□□□□ -0.36
RAB40B-202ENST00000538809 LOC100509620A0A075B734 347 aa12.8□□□□□ -0.36
RAB40B-202ENST00000538809 C5orf49A4QMS7 147 aa12.8□□□□□ -0.36
RAB40B-202ENST00000538809 GMNNO75496 209 aa12.8□□□□□ -0.36
RAB40B-202ENST00000538809 FAM107AO95990 144 aa12.8□□□□□ -0.36
RAB40B-202ENST00000538809 SCG5P05408 212 aa12.8□□□□□ -0.36
RAB40B-202ENST00000538809 ZNF250P15622 560 aa12.8□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 192.5 ms