RNA–Protein interactions for RNA: ENST00000538492.5

RAB40C-204, Transcript of RAB40C, member RAS oncogene family, humanhuman

APPRIS P1 TSL 2 BASIC

Gene RAB40C, Length 2,569 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB40C-204ENST00000538492 RAD52P43351 418 aa22.34■■□□□ 1.17
RAB40C-204ENST00000538492 SELENOPP49908 381 aa22.34■■□□□ 1.17
RAB40C-204ENST00000538492 POU3F1Q03052 451 aaPredicted RBP22.34■■□□□ 1.17
RAB40C-204ENST00000538492 ELFN2Q5R3F8 820 aa22.34■■□□□ 1.17
RAB40C-204ENST00000538492 BIVMQ86UB2 503 aa22.34■■□□□ 1.17
RAB40C-204ENST00000538492 NPIPA1Q9UND3 350 aa22.34■■□□□ 1.17
RAB40C-204ENST00000538492 CTAG2O75638 210 aa22.33■■□□□ 1.17
RAB40C-204ENST00000538492 KDM4BO94953 1096 aa22.33■■□□□ 1.17
RAB40C-204ENST00000538492 LDOC1O95751 146 aaPredicted RBP22.33■■□□□ 1.17
RAB40C-204ENST00000538492 FOXF1Q12946 379 aa22.33■■□□□ 1.17
RAB40C-204ENST00000538492 OLFML2AQ68BL7 652 aa22.33■■□□□ 1.17
RAB40C-204ENST00000538492 OR52N5Q8NH56 324 aa22.33■■□□□ 1.17
RAB40C-204ENST00000538492 ST8SIA1Q92185 356 aa22.33■■□□□ 1.17
RAB40C-204ENST00000538492 DLL4Q9NR61 685 aa22.33■■□□□ 1.17
RAB40C-204ENST00000538492 EMC9Q9Y3B6 208 aa22.33■■□□□ 1.17
RAB40C-204ENST00000538492 IGKV1D-43A0A0B4J1Z2 117 aa22.33■■□□□ 1.16
RAB40C-204ENST00000538492 A0A1W2PQM1 296 aa22.33■■□□□ 1.16
RAB40C-204ENST00000538492 TMEM200CA6NKL6 621 aa22.33■■□□□ 1.16
RAB40C-204ENST00000538492 MNDAP41218 407 aa22.33■■□□□ 1.16
RAB40C-204ENST00000538492 ACY1Q03154 408 aa22.33■■□□□ 1.16
RAB40C-204ENST00000538492 SQSTM1Q13501 440 aa22.33■■□□□ 1.16
RAB40C-204ENST00000538492 C2orf76Q3KRA6 126 aa22.33■■□□□ 1.16
RAB40C-204ENST00000538492 C5orf46Q6UWT4 87 aa22.33■■□□□ 1.16
RAB40C-204ENST00000538492 OR8H1Q8NGG4 311 aa22.33■■□□□ 1.16
RAB40C-204ENST00000538492 ASB5Q8WWX0 329 aa22.33■■□□□ 1.16
RAB40C-204ENST00000538492 HLA-CQ95604 372 aa22.33■■□□□ 1.16
RAB40C-204ENST00000538492 KLRF1Q9NZS2 232 aa22.33■■□□□ 1.16
RAB40C-204ENST00000538492 PCDHGA5Q9Y5G8 931 aa22.33■■□□□ 1.16
RAB40C-204ENST00000538492 RALGAPA1Q6GYQ0 2036 aa22.32■■□□□ 1.16
RAB40C-204ENST00000538492 TOXO94900 526 aa22.32■■□□□ 1.16
RAB40C-204ENST00000538492 GUCA2AQ02747 115 aa22.32■■□□□ 1.16
RAB40C-204ENST00000538492 CAMK2DQ13557 499 aa22.32■■□□□ 1.16
RAB40C-204ENST00000538492 PCGF3Q3KNV8 242 aa22.32■■□□□ 1.16
RAB40C-204ENST00000538492 ANKRD16Q6P6B7 361 aa22.32■■□□□ 1.16
RAB40C-204ENST00000538492 CATSPERDQ86XM0 798 aa22.32■■□□□ 1.16
RAB40C-204ENST00000538492 ASB10Q8WXI3 467 aa22.32■■□□□ 1.16
RAB40C-204ENST00000538492 FAM3DQ96BQ1 224 aa22.32■■□□□ 1.16
RAB40C-204ENST00000538492 METTL17Q9H7H0 456 aaPredicted RBP22.32■■□□□ 1.16
RAB40C-204ENST00000538492 TNFSF12-TNFSF13A0A0A6YY99 330 aa22.32■■□□□ 1.16
RAB40C-204ENST00000538492 MEIS3P1A6NDR6 274 aa22.32■■□□□ 1.16
RAB40C-204ENST00000538492 GGT3PA6NGU5 568 aa22.32■■□□□ 1.16
RAB40C-204ENST00000538492 ANXA7P20073 488 aaKnown RBP22.32■■□□□ 1.16
RAB40C-204ENST00000538492 DHPSP49366 369 aaPredicted RBP22.32■■□□□ 1.16
RAB40C-204ENST00000538492 TLE3Q04726 772 aa22.32■■□□□ 1.16
RAB40C-204ENST00000538492 RAB11BQ15907 218 aa22.32■■□□□ 1.16
RAB40C-204ENST00000538492 TMEM225Q6GV28 225 aa22.32■■□□□ 1.16
RAB40C-204ENST00000538492 H1FNTQ75WM6 255 aaPredicted RBP22.32■■□□□ 1.16
RAB40C-204ENST00000538492 DCXRQ7Z4W1 244 aa22.32■■□□□ 1.16
RAB40C-204ENST00000538492 C15orf40Q8WUR7 153 aa22.32■■□□□ 1.16
RAB40C-204ENST00000538492 HGDQ93099 445 aa22.32■■□□□ 1.16
RAB40C-204ENST00000538492 TGM6O95932 706 aa22.31■■□□□ 1.16
RAB40C-204ENST00000538492 ZNF823P16415 610 aa22.31■■□□□ 1.16
RAB40C-204ENST00000538492 CCL7P80098 99 aa22.31■■□□□ 1.16
RAB40C-204ENST00000538492 LRFN4Q6PJG9 635 aa22.31■■□□□ 1.16
RAB40C-204ENST00000538492 ZNF767PQ75MW2 155 aa22.31■■□□□ 1.16
RAB40C-204ENST00000538492 SLC26A10Q8NG04 563 aa22.31■■□□□ 1.16
RAB40C-204ENST00000538492 C5orf34Q96MH7 638 aa22.31■■□□□ 1.16
RAB40C-204ENST00000538492 ZNF436Q9C0F3 470 aaPredicted RBP22.31■■□□□ 1.16
RAB40C-204ENST00000538492 TAS2R4Q9NYW5 299 aa22.31■■□□□ 1.16
RAB40C-204ENST00000538492 TRAV18A0A075B6X5 111 aa22.31■■□□□ 1.16
RAB40C-204ENST00000538492 A0A1B0GVI7 797 aa22.31■■□□□ 1.16
RAB40C-204ENST00000538492 TOX3O15405 576 aaPredicted RBP22.31■■□□□ 1.16
RAB40C-204ENST00000538492 RBBP9O75884 186 aa22.31■■□□□ 1.16
RAB40C-204ENST00000538492 OPN1LWP04000 364 aa22.31■■□□□ 1.16
RAB40C-204ENST00000538492 DNASE1P24855 282 aa22.31■■□□□ 1.16
RAB40C-204ENST00000538492 APOBEC1P41238 236 aaKnown RBP22.31■■□□□ 1.16
RAB40C-204ENST00000538492 EMP2P54851 167 aa22.31■■□□□ 1.16
RAB40C-204ENST00000538492 FAM69BQ5VUD6 431 aa22.31■■□□□ 1.16
RAB40C-204ENST00000538492 CORO6Q6QEF8 472 aa22.31■■□□□ 1.16
RAB40C-204ENST00000538492 NUBPLQ8TB37 319 aa22.31■■□□□ 1.16
RAB40C-204ENST00000538492 GPR137Q96N19 417 aa22.31■■□□□ 1.16
RAB40C-204ENST00000538492 GAL3ST1Q99999 423 aa22.31■■□□□ 1.16
RAB40C-204ENST00000538492 WDR77Q9BQA1 342 aaPredicted RBP22.31■■□□□ 1.16
RAB40C-204ENST00000538492 SLC17A2O00624 439 aa22.3■■□□□ 1.16
RAB40C-204ENST00000538492 SCAND1P57086 179 aa22.3■■□□□ 1.16
RAB40C-204ENST00000538492 DCDP81605 110 aaKnown RBP22.3■■□□□ 1.16
RAB40C-204ENST00000538492 METTL11BQ5VVY1 283 aa22.3■■□□□ 1.16
RAB40C-204ENST00000538492 OR1J4Q8NGS1 313 aa22.3■■□□□ 1.16
RAB40C-204ENST00000538492 OR2T35Q8NGX2 323 aa22.3■■□□□ 1.16
RAB40C-204ENST00000538492 MFSD8Q8NHS3 518 aa22.3■■□□□ 1.16
RAB40C-204ENST00000538492 THRSPQ92748 146 aa22.3■■□□□ 1.16
RAB40C-204ENST00000538492 CLDN23Q96B33 292 aa22.3■■□□□ 1.16
RAB40C-204ENST00000538492 EMC6Q9BV81 110 aa22.3■■□□□ 1.16
RAB40C-204ENST00000538492 CHIAQ9BZP6 476 aa22.3■■□□□ 1.16
RAB40C-204ENST00000538492 A0A1B0GUH1 482 aa22.3■■□□□ 1.16
RAB40C-204ENST00000538492 PRAF2O60831 178 aa22.3■■□□□ 1.16
RAB40C-204ENST00000538492 LCN10Q6JVE6 187 aa22.3■■□□□ 1.16
RAB40C-204ENST00000538492 CITED4Q96RK1 184 aa22.3■■□□□ 1.16
RAB40C-204ENST00000538492 APMAPQ9HDC9 416 aa22.3■■□□□ 1.16
RAB40C-204ENST00000538492 DIABLOQ9NR28 239 aa22.3■■□□□ 1.16
RAB40C-204ENST00000538492 ZNF69Q9UC07 566 aa22.3■■□□□ 1.16
RAB40C-204ENST00000538492 RARRES3Q9UL19 164 aa22.3■■□□□ 1.16
RAB40C-204ENST00000538492 A6NIZ1 184 aa22.29■■□□□ 1.16
RAB40C-204ENST00000538492 GNG2P59768 71 aa22.29■■□□□ 1.16
RAB40C-204ENST00000538492 RAP1BP61224 184 aa22.29■■□□□ 1.16
RAB40C-204ENST00000538492 RAP1AP62834 184 aa22.29■■□□□ 1.16
RAB40C-204ENST00000538492 HSF1Q00613 529 aa22.29■■□□□ 1.16
RAB40C-204ENST00000538492 C19orf57Q0VDD7 668 aa22.29■■□□□ 1.16
RAB40C-204ENST00000538492 HYAL4Q2M3T9 481 aa22.29■■□□□ 1.16
RAB40C-204ENST00000538492 DNM1P46Q6ZS02 220 aa22.29■■□□□ 1.16
Retrieved 100 of 20,778 RNA–protein pairs in 28.3 ms