RNA–Protein interactions for RNA: ENST00000538475.5

USP28-207, Transcript of ubiquitin specific peptidase 28, humanhuman

TSL 3

Gene USP28, Length 1,081 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP28-207ENST00000538475 OR52A4PA6NMU1 304 aa6.06□□□□□ -1.44
USP28-207ENST00000538475 ZNF705EA8MWA4 302 aaPredicted RBP6.06□□□□□ -1.44
USP28-207ENST00000538475 FAM157AC9JC47 383 aa6.06□□□□□ -1.44
USP28-207ENST00000538475 ARPC3O15145 178 aa6.06□□□□□ -1.44
USP28-207ENST00000538475 PIN1P1O15428 100 aa6.06□□□□□ -1.44
USP28-207ENST00000538475 SYT7O43581 403 aa6.06□□□□□ -1.44
USP28-207ENST00000538475 CTAG2O75638 210 aa6.06□□□□□ -1.44
USP28-207ENST00000538475 KAT7O95251 611 aa6.06□□□□□ -1.44
USP28-207ENST00000538475 SLC2A10O95528 541 aa6.06□□□□□ -1.44
USP28-207ENST00000538475 SERPINA5P05154 406 aa6.06□□□□□ -1.44
USP28-207ENST00000538475 DBIP07108 87 aaKnown RBP6.06□□□□□ -1.44
USP28-207ENST00000538475 RHOP08100 348 aa6.06□□□□□ -1.44
USP28-207ENST00000538475 ITGA5P08648 1049 aa6.06□□□□□ -1.44
USP28-207ENST00000538475 ERGP11308 486 aa6.06□□□□□ -1.44
USP28-207ENST00000538475 CSNK2A2P19784 350 aaPredicted RBP6.06□□□□□ -1.44
USP28-207ENST00000538475 CPT2P23786 658 aa6.06□□□□□ -1.44
USP28-207ENST00000538475 ACKR3P25106 362 aa6.06□□□□□ -1.44
USP28-207ENST00000538475 HTR2CP28335 458 aa6.06□□□□□ -1.44
USP28-207ENST00000538475 GABRR2P28476 465 aa6.06□□□□□ -1.44
USP28-207ENST00000538475 DDTP30046 118 aa6.06□□□□□ -1.44
USP28-207ENST00000538475 ARRB1P49407 418 aaPredicted RBP6.06□□□□□ -1.44
USP28-207ENST00000538475 SUCLG1P53597 346 aaKnown RBP6.06□□□□□ -1.44
USP28-207ENST00000538475 REEP5Q00765 189 aa6.06□□□□□ -1.44
USP28-207ENST00000538475 HGFACQ04756 655 aa6.06□□□□□ -1.44
USP28-207ENST00000538475 FUT5Q11128 374 aa6.06□□□□□ -1.44
USP28-207ENST00000538475 HSPB3Q12988 150 aa6.06□□□□□ -1.44
USP28-207ENST00000538475 CHAF1BQ13112 559 aa6.06□□□□□ -1.44
USP28-207ENST00000538475 MELKQ14680 651 aa6.06□□□□□ -1.44
USP28-207ENST00000538475 AMZ1Q400G9 498 aa6.06□□□□□ -1.44
USP28-207ENST00000538475 ZNF658BQ4V348 819 aaPredicted RBP6.06□□□□□ -1.44
USP28-207ENST00000538475 RNASE10Q5GAN6 216 aaKnown RBP6.06□□□□□ -1.44
USP28-207ENST00000538475 PRAMEF14Q5SWL7 426 aa6.06□□□□□ -1.44
USP28-207ENST00000538475 ZNF684Q5T5D7 378 aa6.06□□□□□ -1.44
USP28-207ENST00000538475 NKAIN2Q5VXU1 208 aa6.06□□□□□ -1.44
USP28-207ENST00000538475 PRSS54Q6PEW0 395 aa6.06□□□□□ -1.44
USP28-207ENST00000538475 GLB1LQ6UWU2 654 aa6.06□□□□□ -1.44
USP28-207ENST00000538475 FAM220AQ7Z4H9 259 aa6.06□□□□□ -1.44
USP28-207ENST00000538475 LRRTM1Q86UE6 522 aa6.06□□□□□ -1.44
USP28-207ENST00000538475 COMTD1Q86VU5 262 aa6.06□□□□□ -1.44
USP28-207ENST00000538475 C17orf64Q86WR6 236 aa6.06□□□□□ -1.44
USP28-207ENST00000538475 ZFP82Q8N141 532 aa6.06□□□□□ -1.44
USP28-207ENST00000538475 PAQR4Q8N4S7 273 aaPredicted RBP6.06□□□□□ -1.44
USP28-207ENST00000538475 OR5AK2Q8NH90 309 aa6.06□□□□□ -1.44
USP28-207ENST00000538475 CDS1Q92903 461 aa6.06□□□□□ -1.44
USP28-207ENST00000538475 SLC25A28Q96A46 364 aa6.06□□□□□ -1.44
USP28-207ENST00000538475 SLC25A36Q96CQ1 311 aa6.06□□□□□ -1.44
USP28-207ENST00000538475 PEX11GQ96HA9 241 aa6.06□□□□□ -1.44
USP28-207ENST00000538475 MOGAT1Q96PD6 335 aa6.06□□□□□ -1.44
USP28-207ENST00000538475 OR7D2Q96RA2 312 aa6.06□□□□□ -1.44
USP28-207ENST00000538475 PRSS27Q9BQR3 290 aa6.06□□□□□ -1.44
USP28-207ENST00000538475 SULT4A1Q9BR01 284 aa6.06□□□□□ -1.44
USP28-207ENST00000538475 ORAI3Q9BRQ5 295 aa6.06□□□□□ -1.44
USP28-207ENST00000538475 TRMT61BQ9BVS5 477 aaKnown RBP6.06□□□□□ -1.44
USP28-207ENST00000538475 PDGFDQ9GZP0 370 aaPredicted RBP6.06□□□□□ -1.44
USP28-207ENST00000538475 GLIPR2Q9H4G4 154 aa6.06□□□□□ -1.44
USP28-207ENST00000538475 CHMP1AQ9HD42 196 aaPredicted RBP6.06□□□□□ -1.44
USP28-207ENST00000538475 RAB18Q9NP72 206 aa6.06□□□□□ -1.44
USP28-207ENST00000538475 SIRT7Q9NRC8 400 aa6.06□□□□□ -1.44
USP28-207ENST00000538475 CYTL1Q9NRR1 136 aa6.06□□□□□ -1.44
USP28-207ENST00000538475 DHCR7Q9UBM7 475 aaKnown RBP6.06□□□□□ -1.44
USP28-207ENST00000538475 CACNG4Q9UBN1 327 aa6.06□□□□□ -1.44
USP28-207ENST00000538475 HS3ST2Q9Y278 367 aa6.06□□□□□ -1.44
USP28-207ENST00000538475 ZNF443Q9Y2A4 671 aaPredicted RBP6.06□□□□□ -1.44
USP28-207ENST00000538475 STARD10Q9Y365 291 aa6.06□□□□□ -1.44
USP28-207ENST00000538475 NOP16Q9Y3C1 178 aaKnown RBP6.06□□□□□ -1.44
USP28-207ENST00000538475 ZNF337Q9Y3M9 751 aa6.06□□□□□ -1.44
USP28-207ENST00000538475 ADAM18Q9Y3Q7 739 aa6.06□□□□□ -1.44
USP28-207ENST00000538475 PCYT1BQ9Y5K3 369 aaPredicted RBP6.06□□□□□ -1.44
USP28-207ENST00000538475 MRPL42Q9Y6G3 142 aaKnown RBP6.06□□□□□ -1.44
USP28-207ENST00000538475 A0A087WUJ7 227 aa6.05□□□□□ -1.44
USP28-207ENST00000538475 A0A0A6YYD5 115 aa6.05□□□□□ -1.44
USP28-207ENST00000538475 FAM183AA6NL82 134 aa6.05□□□□□ -1.44
USP28-207ENST00000538475 OR2AG2A6NM03 316 aa6.05□□□□□ -1.44
USP28-207ENST00000538475 TMEM212A6NML5 194 aa6.05□□□□□ -1.44
USP28-207ENST00000538475 CEACAM18A8MTB9 384 aa6.05□□□□□ -1.44
USP28-207ENST00000538475 PSMD9O00233 223 aa6.05□□□□□ -1.44
USP28-207ENST00000538475 SLC17A2O00624 439 aa6.05□□□□□ -1.44
USP28-207ENST00000538475 CDC42EP2O14613 210 aa6.05□□□□□ -1.44
USP28-207ENST00000538475 NDUFS4O43181 175 aa6.05□□□□□ -1.44
USP28-207ENST00000538475 MBTPS2O43462 519 aa6.05□□□□□ -1.44
USP28-207ENST00000538475 TBL1XO60907 577 aa6.05□□□□□ -1.44
USP28-207ENST00000538475 JTBO76095 146 aa6.05□□□□□ -1.44
USP28-207ENST00000538475 PPP1R3DO95685 299 aa6.05□□□□□ -1.44
USP28-207ENST00000538475 TSPAN15O95858 294 aa6.05□□□□□ -1.44
USP28-207ENST00000538475 CYB5AP00167 134 aa6.05□□□□□ -1.44
USP28-207ENST00000538475 CST4P01036 141 aa6.05□□□□□ -1.44
USP28-207ENST00000538475 LRG1P02750 347 aa6.05□□□□□ -1.44
USP28-207ENST00000538475 KLKB1P03952 638 aa6.05□□□□□ -1.44
USP28-207ENST00000538475 HMGN2P05204 90 aaKnown RBP6.05□□□□□ -1.44
USP28-207ENST00000538475 KLK3P07288 261 aaPredicted RBP6.05□□□□□ -1.44
USP28-207ENST00000538475 OR4Q2P0C623 313 aa6.05□□□□□ -1.44
USP28-207ENST00000538475 ZNF735P0CB33 412 aa6.05□□□□□ -1.44
USP28-207ENST00000538475 RPS4Y1P22090 263 aaKnown RBP6.05□□□□□ -1.44
USP28-207ENST00000538475 CXCR1P25024 350 aa6.05□□□□□ -1.44
USP28-207ENST00000538475 MPIP34949 423 aa6.05□□□□□ -1.44
USP28-207ENST00000538475 SLC25A1P53007 311 aa6.05□□□□□ -1.44
USP28-207ENST00000538475 FAM3AP98173 230 aa6.05□□□□□ -1.44
USP28-207ENST00000538475 OC90Q02509 493 aaPredicted RBP6.05□□□□□ -1.44
USP28-207ENST00000538475 NHLH2Q02577 135 aa6.05□□□□□ -1.44
USP28-207ENST00000538475 RASGEF1BQ0VAM2 473 aa6.05□□□□□ -1.44
Retrieved 100 of 20,778 RNA–protein pairs in 51.7 ms