RNA–Protein interactions for RNA: ENST00000538363.1

TNFRSF1A-211, Transcript of TNF receptor superfamily member 1A, humanhuman

TSL 2

Gene TNFRSF1A, Length 554 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF1A-211ENST00000538363 CENPMQ9NSP4 180 aa9.42□□□□□ -0.9
TNFRSF1A-211ENST00000538363 GALNT8Q9NY28 637 aa9.42□□□□□ -0.9
TNFRSF1A-211ENST00000538363 PRSS50Q9UI38 385 aa9.42□□□□□ -0.9
TNFRSF1A-211ENST00000538363 DIMT1Q9UNQ2 313 aaKnown RBP9.42□□□□□ -0.9
TNFRSF1A-211ENST00000538363 EXOGQ9Y2C4 368 aaKnown RBP9.42□□□□□ -0.9
TNFRSF1A-211ENST00000538363 IGLV1-36A0A0B4J1U3 117 aa9.41□□□□□ -0.9
TNFRSF1A-211ENST00000538363 CCDC160A6NGH7 325 aa9.41□□□□□ -0.9
TNFRSF1A-211ENST00000538363 EEF1E1-BLOC1S5C9J1V9 151 aa9.41□□□□□ -0.9
TNFRSF1A-211ENST00000538363 DVL2O14641 736 aa9.41□□□□□ -0.9
TNFRSF1A-211ENST00000538363 EEF1E1O43324 174 aaKnown RBP9.41□□□□□ -0.9
TNFRSF1A-211ENST00000538363 NOL3O60936 208 aaKnown RBP9.41□□□□□ -0.9
TNFRSF1A-211ENST00000538363 MT-ND5P03915 603 aa9.41□□□□□ -0.9
TNFRSF1A-211ENST00000538363 OR8G3PP0DMU2 310 aa9.41□□□□□ -0.9
TNFRSF1A-211ENST00000538363 GLI4P10075 376 aa9.41□□□□□ -0.9
TNFRSF1A-211ENST00000538363 CD79AP11912 226 aa9.41□□□□□ -0.9
TNFRSF1A-211ENST00000538363 PSMB9P28065 219 aa9.41□□□□□ -0.9
TNFRSF1A-211ENST00000538363 C21orf33P30042 268 aaPredicted RBP9.41□□□□□ -0.9
TNFRSF1A-211ENST00000538363 MAP2K4P45985 399 aa9.41□□□□□ -0.9
TNFRSF1A-211ENST00000538363 OR3A2P47893 321 aa9.41□□□□□ -0.9
TNFRSF1A-211ENST00000538363 GBX2P52951 348 aaPredicted RBP9.41□□□□□ -0.9
TNFRSF1A-211ENST00000538363 HCCSP53701 268 aa9.41□□□□□ -0.9
TNFRSF1A-211ENST00000538363 NR1H2P55055 460 aa9.41□□□□□ -0.9
TNFRSF1A-211ENST00000538363 UBE2NP61088 152 aaKnown RBP9.41□□□□□ -0.9
TNFRSF1A-211ENST00000538363 PCBD1P61457 104 aa9.41□□□□□ -0.9
TNFRSF1A-211ENST00000538363 ACTA2P62736 377 aa9.41□□□□□ -0.9
TNFRSF1A-211ENST00000538363 ACTG2P63267 376 aa9.41□□□□□ -0.9
TNFRSF1A-211ENST00000538363 TUBA4AP68366 448 aa9.41□□□□□ -0.9
TNFRSF1A-211ENST00000538363 MVKQ03426 396 aa9.41□□□□□ -0.9
TNFRSF1A-211ENST00000538363 DBPQ10586 325 aaPredicted RBP9.41□□□□□ -0.9
TNFRSF1A-211ENST00000538363 MEP1BQ16820 701 aa9.41□□□□□ -0.9
TNFRSF1A-211ENST00000538363 PHYHD1Q5SRE7 291 aa9.41□□□□□ -0.9
TNFRSF1A-211ENST00000538363 C10orf128Q5T292 105 aa9.41□□□□□ -0.9
TNFRSF1A-211ENST00000538363 RIPPLY2Q5TAB7 128 aa9.41□□□□□ -0.9
TNFRSF1A-211ENST00000538363 NHLRC1Q6VVB1 395 aa9.41□□□□□ -0.9
TNFRSF1A-211ENST00000538363 PLEKHG7Q6ZR37 379 aa9.41□□□□□ -0.9
TNFRSF1A-211ENST00000538363 BEND4Q6ZU67 534 aa9.41□□□□□ -0.9
TNFRSF1A-211ENST00000538363 SPATC1Q76KD6 591 aa9.41□□□□□ -0.9
TNFRSF1A-211ENST00000538363 SLC16A14Q7RTX9 510 aa9.41□□□□□ -0.9
TNFRSF1A-211ENST00000538363 DPY19L4Q7Z388 723 aa9.41□□□□□ -0.9
TNFRSF1A-211ENST00000538363 ADGRE4PQ86SQ3 457 aa9.41□□□□□ -0.9
TNFRSF1A-211ENST00000538363 LINC00346Q8IVM7 164 aa9.41□□□□□ -0.9
TNFRSF1A-211ENST00000538363 SPARTQ8N0X7 666 aa9.41□□□□□ -0.9
TNFRSF1A-211ENST00000538363 SMAP2Q8WU79 429 aaPredicted RBP9.41□□□□□ -0.9
TNFRSF1A-211ENST00000538363 ASB17Q8WXJ9 295 aa9.41□□□□□ -0.9
TNFRSF1A-211ENST00000538363 NANOS1Q8WY41 292 aaKnown RBP9.41□□□□□ -0.9
TNFRSF1A-211ENST00000538363 FCGR1BQ92637 280 aa9.41□□□□□ -0.9
TNFRSF1A-211ENST00000538363 LRRC46Q96FV0 321 aa9.41□□□□□ -0.9
TNFRSF1A-211ENST00000538363 USB1Q9BQ65 265 aaKnown RBP9.41□□□□□ -0.9
TNFRSF1A-211ENST00000538363 RHNO1Q9BSD3 238 aa9.41□□□□□ -0.9
TNFRSF1A-211ENST00000538363 ALG8Q9BVK2 526 aa9.41□□□□□ -0.9
TNFRSF1A-211ENST00000538363 SFXN3Q9BWM7 321 aa9.41□□□□□ -0.9
TNFRSF1A-211ENST00000538363 MROQ9BYG7 248 aa9.41□□□□□ -0.9
TNFRSF1A-211ENST00000538363 NELFAQ9H3P2 528 aa9.41□□□□□ -0.9
TNFRSF1A-211ENST00000538363 SIAEQ9HAT2 523 aa9.41□□□□□ -0.9
TNFRSF1A-211ENST00000538363 ADGRL4Q9HBW9 690 aa9.41□□□□□ -0.9
TNFRSF1A-211ENST00000538363 POLE4Q9NR33 117 aa9.41□□□□□ -0.9
TNFRSF1A-211ENST00000538363 MRPS18AQ9NVS2 196 aaKnown RBP9.41□□□□□ -0.9
TNFRSF1A-211ENST00000538363 COQ3Q9NZJ6 369 aa9.41□□□□□ -0.9
TNFRSF1A-211ENST00000538363 KCNG2Q9UJ96 466 aa9.41□□□□□ -0.9
TNFRSF1A-211ENST00000538363 GNG8Q9UK08 70 aa9.41□□□□□ -0.9
TNFRSF1A-211ENST00000538363 ING1Q9UK53 422 aaPredicted RBP9.41□□□□□ -0.9
TNFRSF1A-211ENST00000538363 GTF2A1LQ9UNN4 478 aa9.41□□□□□ -0.9
TNFRSF1A-211ENST00000538363 ZNF835Q9Y2P0 537 aa9.41□□□□□ -0.9
TNFRSF1A-211ENST00000538363 FAM215AQ9Y5M1 114 aa9.41□□□□□ -0.9
TNFRSF1A-211ENST00000538363 SVILO95425 2214 aa9.4□□□□□ -0.9
TNFRSF1A-211ENST00000538363 A0A096LPE4 126 aa9.4□□□□□ -0.9
TNFRSF1A-211ENST00000538363 A0A1W2PPZ6 126 aa9.4□□□□□ -0.9
TNFRSF1A-211ENST00000538363 A0A1W2PQL4 384 aaPredicted RBP9.4□□□□□ -0.9
TNFRSF1A-211ENST00000538363 ZNF99A8MXY4 864 aaPredicted RBP9.4□□□□□ -0.9
TNFRSF1A-211ENST00000538363 E9PLN8 166 aa9.4□□□□□ -0.9
TNFRSF1A-211ENST00000538363 SEC14L2O76054 403 aa9.4□□□□□ -0.9
TNFRSF1A-211ENST00000538363 HRGP04196 525 aa9.4□□□□□ -0.9
TNFRSF1A-211ENST00000538363 H2BFMP0C1H6 154 aa9.4□□□□□ -0.9
TNFRSF1A-211ENST00000538363 B4GALT1P15291 398 aa9.4□□□□□ -0.9
TNFRSF1A-211ENST00000538363 BMP5P22003 454 aa9.4□□□□□ -0.9
TNFRSF1A-211ENST00000538363 IL32P24001 234 aa9.4□□□□□ -0.9
TNFRSF1A-211ENST00000538363 HSD11B1P28845 292 aa9.4□□□□□ -0.9
TNFRSF1A-211ENST00000538363 MPGP29372 298 aa9.4□□□□□ -0.9
TNFRSF1A-211ENST00000538363 SLC15A1P46059 708 aa9.4□□□□□ -0.9
TNFRSF1A-211ENST00000538363 ETV1P50549 477 aa9.4□□□□□ -0.9
TNFRSF1A-211ENST00000538363 SH3BGRP55822 239 aaPredicted RBP9.4□□□□□ -0.9
TNFRSF1A-211ENST00000538363 PLP2Q04941 152 aa9.4□□□□□ -0.9
TNFRSF1A-211ENST00000538363 FOXF2Q12947 444 aa9.4□□□□□ -0.9
TNFRSF1A-211ENST00000538363 GALEQ14376 348 aa9.4□□□□□ -0.9
TNFRSF1A-211ENST00000538363 GGTLC2Q14390 218 aa9.4□□□□□ -0.9
TNFRSF1A-211ENST00000538363 HIST3H3Q16695 136 aa9.4□□□□□ -0.9
TNFRSF1A-211ENST00000538363 SLC36A2Q495M3 483 aa9.4□□□□□ -0.9
TNFRSF1A-211ENST00000538363 OTPQ5XKR4 325 aa9.4□□□□□ -0.9
TNFRSF1A-211ENST00000538363 RTL6Q6ICC9 239 aa9.4□□□□□ -0.9
TNFRSF1A-211ENST00000538363 TMEM53Q6P2H8 277 aa9.4□□□□□ -0.9
TNFRSF1A-211ENST00000538363 VWA1Q6PCB0 445 aa9.4□□□□□ -0.9
TNFRSF1A-211ENST00000538363 LYPD4Q6UWN0 246 aa9.4□□□□□ -0.9
TNFRSF1A-211ENST00000538363 GPR141Q7Z602 305 aa9.4□□□□□ -0.9
TNFRSF1A-211ENST00000538363 BTLAQ7Z6A9 289 aa9.4□□□□□ -0.9
TNFRSF1A-211ENST00000538363 WDFY1Q8IWB7 410 aa9.4□□□□□ -0.9
TNFRSF1A-211ENST00000538363 ALDH16A1Q8IZ83 802 aa9.4□□□□□ -0.9
TNFRSF1A-211ENST00000538363 SLC26A10Q8NG04 563 aa9.4□□□□□ -0.9
TNFRSF1A-211ENST00000538363 ZNRF4Q8WWF5 429 aa9.4□□□□□ -0.9
TNFRSF1A-211ENST00000538363 GATAD2BQ8WXI9 593 aa9.4□□□□□ -0.9
TNFRSF1A-211ENST00000538363 SGCDQ92629 289 aa9.4□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 21.7 ms