RNA–Protein interactions for RNA: ENST00000538235.2

CHFR-216, Transcript of checkpoint with forkhead and ring finger domains, humanhuman

TSL 3

Gene CHFR, Length 687 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHFR-216ENST00000538235 ZBTB46Q86UZ6 589 aa11.36□□□□□ -0.59
CHFR-216ENST00000538235 HIPK1Q86Z02 1210 aa11.36□□□□□ -0.59
CHFR-216ENST00000538235 CPEB3Q8NE35 698 aaKnown RBP11.36□□□□□ -0.59
CHFR-216ENST00000538235 SLC26A10Q8NG04 563 aa11.36□□□□□ -0.59
CHFR-216ENST00000538235 OR52L1Q8NGH7 329 aa11.36□□□□□ -0.59
CHFR-216ENST00000538235 TEX47Q8TBZ9 253 aa11.36□□□□□ -0.59
CHFR-216ENST00000538235 C11orf40Q8WZ69 217 aa11.36□□□□□ -0.59
CHFR-216ENST00000538235 SNX18Q96RF0 628 aa11.36□□□□□ -0.59
CHFR-216ENST00000538235 MBOAT4Q96T53 435 aa11.36□□□□□ -0.59
CHFR-216ENST00000538235 BDH2Q9BUT1 245 aa11.36□□□□□ -0.59
CHFR-216ENST00000538235 WNT5BQ9H1J7 359 aa11.36□□□□□ -0.59
CHFR-216ENST00000538235 RERGLQ9H628 205 aa11.36□□□□□ -0.59
CHFR-216ENST00000538235 HINT3Q9NQE9 182 aaKnown RBP11.36□□□□□ -0.59
CHFR-216ENST00000538235 NKX1-2Q9UD57 310 aaPredicted RBP11.36□□□□□ -0.59
CHFR-216ENST00000538235 VPS13CQ709C8 3753 aa11.36□□□□□ -0.59
CHFR-216ENST00000538235 NOTCH2Q04721 2471 aa11.35□□□□□ -0.59
CHFR-216ENST00000538235 NAV2Q8IVL1 2488 aa11.35□□□□□ -0.59
CHFR-216ENST00000538235 OTOGQ6ZRI0 2925 aa11.35□□□□□ -0.59
CHFR-216ENST00000538235 ZAR1LA6NP61 321 aa11.35□□□□□ -0.59
CHFR-216ENST00000538235 E7EQL1 145 aa11.35□□□□□ -0.59
CHFR-216ENST00000538235 H3BN98 237 aa11.35□□□□□ -0.59
CHFR-216ENST00000538235 XKRYO14609 159 aa11.35□□□□□ -0.59
CHFR-216ENST00000538235 SURF4O15260 269 aa11.35□□□□□ -0.59
CHFR-216ENST00000538235 CD79AP11912 226 aa11.35□□□□□ -0.59
CHFR-216ENST00000538235 CCL2P13500 99 aa11.35□□□□□ -0.59
CHFR-216ENST00000538235 CBR1P16152 277 aa11.35□□□□□ -0.59
CHFR-216ENST00000538235 PTDSS1P48651 473 aaKnown RBP11.35□□□□□ -0.59
CHFR-216ENST00000538235 CRISP1P54107 249 aa11.35□□□□□ -0.59
CHFR-216ENST00000538235 NAAAQ02083 359 aa11.35□□□□□ -0.59
CHFR-216ENST00000538235 HGFACQ04756 655 aa11.35□□□□□ -0.59
CHFR-216ENST00000538235 NPRL3Q12980 569 aa11.35□□□□□ -0.59
CHFR-216ENST00000538235 DAG1Q14118 895 aa11.35□□□□□ -0.59
CHFR-216ENST00000538235 RCN1Q15293 331 aa11.35□□□□□ -0.59
CHFR-216ENST00000538235 SGCAQ16586 387 aa11.35□□□□□ -0.59
CHFR-216ENST00000538235 TMEM255AQ5JRV8 349 aa11.35□□□□□ -0.59
CHFR-216ENST00000538235 SVOPLQ8N434 492 aa11.35□□□□□ -0.59
CHFR-216ENST00000538235 CBR4Q8N4T8 237 aa11.35□□□□□ -0.59
CHFR-216ENST00000538235 OR2T33Q8NG76 320 aa11.35□□□□□ -0.59
CHFR-216ENST00000538235 AKR7LQ8NHP1 331 aa11.35□□□□□ -0.59
CHFR-216ENST00000538235 MUCL1Q96DR8 90 aa11.35□□□□□ -0.59
CHFR-216ENST00000538235 SLC38A2Q96QD8 506 aa11.35□□□□□ -0.59
CHFR-216ENST00000538235 GABARAPL3Q9BY60 117 aa11.35□□□□□ -0.59
CHFR-216ENST00000538235 RACGAP1Q9H0H5 632 aa11.35□□□□□ -0.59
CHFR-216ENST00000538235 SRA1Q9HD15 236 aaKnown RBP11.35□□□□□ -0.59
CHFR-216ENST00000538235 OBP2BQ9NPH6 170 aa11.35□□□□□ -0.59
CHFR-216ENST00000538235 CMC2Q9NRP2 79 aa11.35□□□□□ -0.59
CHFR-216ENST00000538235 KRT84Q9NSB2 600 aa11.35□□□□□ -0.59
CHFR-216ENST00000538235 KIF17Q9P2E2 1029 aa11.35□□□□□ -0.59
CHFR-216ENST00000538235 STX18Q9P2W9 335 aaKnown RBP11.35□□□□□ -0.59
CHFR-216ENST00000538235 MOKQ9UQ07 419 aa11.35□□□□□ -0.59
CHFR-216ENST00000538235 RNF115Q9Y4L5 304 aa11.35□□□□□ -0.59
CHFR-216ENST00000538235 LHFPL6Q9Y693 200 aa11.35□□□□□ -0.59
CHFR-216ENST00000538235 MAST4O15021 2626 aa11.34□□□□□ -0.59
CHFR-216ENST00000538235 IGHV2OR16-5A0A0B4J2B6 119 aa11.34□□□□□ -0.59
CHFR-216ENST00000538235 TVP23AA6NH52 213 aa11.34□□□□□ -0.59
CHFR-216ENST00000538235 CASKO14936 926 aa11.34□□□□□ -0.59
CHFR-216ENST00000538235 IDH3BO43837 385 aa11.34□□□□□ -0.59
CHFR-216ENST00000538235 PRKYO43930 277 aa11.34□□□□□ -0.59
CHFR-216ENST00000538235 KHDRBS3O75525 346 aaKnown RBP11.34□□□□□ -0.59
CHFR-216ENST00000538235 OR8G3PP0DMU2 310 aa11.34□□□□□ -0.59
CHFR-216ENST00000538235 ANPEPP15144 967 aa11.34□□□□□ -0.59
CHFR-216ENST00000538235 SPI1P17947 270 aa11.34□□□□□ -0.59
CHFR-216ENST00000538235 SLC2A5P22732 501 aa11.34□□□□□ -0.59
CHFR-216ENST00000538235 IGFBP5P24593 272 aa11.34□□□□□ -0.59
CHFR-216ENST00000538235 PEX2P28328 305 aa11.34□□□□□ -0.59
CHFR-216ENST00000538235 CAPZA2P47755 286 aa11.34□□□□□ -0.59
CHFR-216ENST00000538235 ZNF84P51523 738 aa11.34□□□□□ -0.59
CHFR-216ENST00000538235 UBE2NP61088 152 aaKnown RBP11.34□□□□□ -0.59
CHFR-216ENST00000538235 EFNB1P98172 346 aa11.34□□□□□ -0.59
CHFR-216ENST00000538235 PSG4Q00888 419 aa11.34□□□□□ -0.59
CHFR-216ENST00000538235 PTGES3Q15185 160 aaKnown RBP11.34□□□□□ -0.59
CHFR-216ENST00000538235 GSG1Q2KHT4 349 aa11.34□□□□□ -0.59
CHFR-216ENST00000538235 FAM27BQ5VT28 67 aa11.34□□□□□ -0.59
CHFR-216ENST00000538235 SLX4IPQ5VYV7 408 aa11.34□□□□□ -0.59
CHFR-216ENST00000538235 LPCAT4Q643R3 524 aa11.34□□□□□ -0.59
CHFR-216ENST00000538235 C12orf73Q69YU5 71 aa11.34□□□□□ -0.59
CHFR-216ENST00000538235 ZSCAN2Q7Z7L9 614 aaPredicted RBP11.34□□□□□ -0.59
CHFR-216ENST00000538235 JAZF1Q86VZ6 243 aa11.34□□□□□ -0.59
CHFR-216ENST00000538235 ZDHHC13Q8IUH4 622 aa11.34□□□□□ -0.59
CHFR-216ENST00000538235 OR10S1Q8NGN2 331 aa11.34□□□□□ -0.59
CHFR-216ENST00000538235 PTP4A1Q93096 173 aa11.34□□□□□ -0.59
CHFR-216ENST00000538235 RBP7Q96R05 134 aa11.34□□□□□ -0.59
CHFR-216ENST00000538235 CXorf56Q9H5V9 222 aa11.34□□□□□ -0.59
CHFR-216ENST00000538235 SIAEQ9HAT2 523 aa11.34□□□□□ -0.59
CHFR-216ENST00000538235 BATF3Q9NR55 127 aa11.34□□□□□ -0.59
CHFR-216ENST00000538235 USE1Q9NZ43 259 aa11.34□□□□□ -0.59
CHFR-216ENST00000538235 FKBP7Q9Y680 259 aa11.34□□□□□ -0.59
CHFR-216ENST00000538235 MYO9AB2RTY4 2548 aa11.34□□□□□ -0.59
CHFR-216ENST00000538235 USF3Q68DE3 2245 aa11.33□□□□□ -0.59
CHFR-216ENST00000538235 ZNF469Q96JG9 3925 aaPredicted RBP11.33□□□□□ -0.6
CHFR-216ENST00000538235 LOC100509620A0A075B734 347 aa11.33□□□□□ -0.6
CHFR-216ENST00000538235 CCDC182A6NF36 153 aa11.33□□□□□ -0.6
CHFR-216ENST00000538235 AHCYL1O43865 530 aa11.33□□□□□ -0.6
CHFR-216ENST00000538235 HOXB1P14653 301 aaPredicted RBP11.33□□□□□ -0.6
CHFR-216ENST00000538235 MSR1P21757 451 aa11.33□□□□□ -0.6
CHFR-216ENST00000538235 GGT2P36268 569 aa11.33□□□□□ -0.6
CHFR-216ENST00000538235 RAB1AP62820 205 aa11.33□□□□□ -0.6
CHFR-216ENST00000538235 KCNMB1Q16558 191 aa11.33□□□□□ -0.6
CHFR-216ENST00000538235 NRN1LQ496H8 165 aa11.33□□□□□ -0.6
CHFR-216ENST00000538235 PABPC1L2AQ5JQF8 200 aa11.33□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 32.7 ms