RNA–Protein interactions for RNA: ENST00000537934.5

SEMA4D-221, Transcript of semaphorin 4D, humanhuman

TSL 2

Gene SEMA4D, Length 2,710 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEMA4D-221ENST00000537934 TBC1D3LB9A6J9 549 aa10.3□□□□□ -0.76
SEMA4D-221ENST00000537934 OR10H2O60403 315 aa10.3□□□□□ -0.76
SEMA4D-221ENST00000537934 RPN2P04844 631 aa10.3□□□□□ -0.76
SEMA4D-221ENST00000537934 HOXB2P14652 356 aa10.3□□□□□ -0.76
SEMA4D-221ENST00000537934 SCAND1P57086 179 aa10.3□□□□□ -0.76
SEMA4D-221ENST00000537934 GUCA2AQ02747 115 aa10.3□□□□□ -0.76
SEMA4D-221ENST00000537934 BIKQ13323 160 aa10.3□□□□□ -0.76
SEMA4D-221ENST00000537934 TBC1D3CQ6IPX1 549 aa10.3□□□□□ -0.76
SEMA4D-221ENST00000537934 MAMDC2Q7Z304 686 aaPredicted RBP10.3□□□□□ -0.76
SEMA4D-221ENST00000537934 TBC1D3Q8IZP1 549 aaPredicted RBP10.3□□□□□ -0.76
SEMA4D-221ENST00000537934 OR8S1Q8NH09 359 aa10.3□□□□□ -0.76
SEMA4D-221ENST00000537934 OR6X1Q8NH79 312 aa10.3□□□□□ -0.76
SEMA4D-221ENST00000537934 DVL3Q92997 716 aaPredicted RBP10.3□□□□□ -0.76
SEMA4D-221ENST00000537934 MCHR1Q99705 422 aa10.3□□□□□ -0.76
SEMA4D-221ENST00000537934 DPH1Q9BZG8 443 aa10.3□□□□□ -0.76
SEMA4D-221ENST00000537934 DUSP22Q9NRW4 184 aa10.3□□□□□ -0.76
SEMA4D-221ENST00000537934 SIDT1Q9NXL6 827 aaKnown RBP10.3□□□□□ -0.76
SEMA4D-221ENST00000537934 STEAP1Q9UHE8 339 aa10.3□□□□□ -0.76
SEMA4D-221ENST00000537934 KNL1Q8NG31 2342 aa10.3□□□□□ -0.76
SEMA4D-221ENST00000537934 WDFY4Q6ZS81 3184 aa10.29□□□□□ -0.76
SEMA4D-221ENST00000537934 A0A0B4J2A0 478 aa10.29□□□□□ -0.76
SEMA4D-221ENST00000537934 TMEM202A6NGA9 273 aa10.29□□□□□ -0.76
SEMA4D-221ENST00000537934 IGLON5A6NGN9 336 aa10.29□□□□□ -0.76
SEMA4D-221ENST00000537934 RIIAD1A6NNX1 92 aa10.29□□□□□ -0.76
SEMA4D-221ENST00000537934 PLPP1O14494 284 aa10.29□□□□□ -0.76
SEMA4D-221ENST00000537934 SMAD9O15198 467 aaKnown RBP10.29□□□□□ -0.76
SEMA4D-221ENST00000537934 ITGA5P08648 1049 aa10.29□□□□□ -0.76
SEMA4D-221ENST00000537934 OR2T7P0C7T2 308 aa10.29□□□□□ -0.76
SEMA4D-221ENST00000537934 NME2P22392 152 aa10.29□□□□□ -0.76
SEMA4D-221ENST00000537934 NUTF2P61970 127 aaKnown RBP10.29□□□□□ -0.76
SEMA4D-221ENST00000537934 KIAA0141Q14154 515 aaPredicted RBP10.29□□□□□ -0.76
SEMA4D-221ENST00000537934 PRRT3Q5FWE3 981 aa10.29□□□□□ -0.76
SEMA4D-221ENST00000537934 ANKRD16Q6P6B7 361 aa10.29□□□□□ -0.76
SEMA4D-221ENST00000537934 NXPE4Q6UWF7 544 aa10.29□□□□□ -0.76
SEMA4D-221ENST00000537934 STAC2Q6ZMT1 411 aa10.29□□□□□ -0.76
SEMA4D-221ENST00000537934 GABRG1Q8N1C3 465 aa10.29□□□□□ -0.76
SEMA4D-221ENST00000537934 UBAC2Q8NBM4 344 aa10.29□□□□□ -0.76
SEMA4D-221ENST00000537934 CCDC54Q8NEL0 328 aa10.29□□□□□ -0.76
SEMA4D-221ENST00000537934 OR5T3Q8NGG3 340 aa10.29□□□□□ -0.76
SEMA4D-221ENST00000537934 OR2T27Q8NH04 317 aa10.29□□□□□ -0.76
SEMA4D-221ENST00000537934 ADAMTS17Q8TE56 1095 aa10.29□□□□□ -0.76
SEMA4D-221ENST00000537934 CXorf40AQ8TE69 158 aa10.29□□□□□ -0.76
SEMA4D-221ENST00000537934 ZNF480Q8WV37 535 aa10.29□□□□□ -0.76
SEMA4D-221ENST00000537934 UBE2E3Q969T4 207 aa10.29□□□□□ -0.76
SEMA4D-221ENST00000537934 FOXRED1Q96CU9 486 aaPredicted RBP10.29□□□□□ -0.76
SEMA4D-221ENST00000537934 IP6K3Q96PC2 410 aa10.29□□□□□ -0.76
SEMA4D-221ENST00000537934 GABRG3Q99928 467 aa10.29□□□□□ -0.76
SEMA4D-221ENST00000537934 NRSN2Q9GZP1 204 aa10.29□□□□□ -0.76
SEMA4D-221ENST00000537934 ATG5Q9H1Y0 275 aa10.29□□□□□ -0.76
SEMA4D-221ENST00000537934 FN3KRPQ9HA64 309 aa10.29□□□□□ -0.76
SEMA4D-221ENST00000537934 KLHL28Q9NXS3 571 aa10.29□□□□□ -0.76
SEMA4D-221ENST00000537934 SHPKQ9UHJ6 478 aa10.29□□□□□ -0.76
SEMA4D-221ENST00000537934 GNG8Q9UK08 70 aa10.29□□□□□ -0.76
SEMA4D-221ENST00000537934 ZNF281Q9Y2X9 895 aa10.29□□□□□ -0.76
SEMA4D-221ENST00000537934 TRBV6-7A0A0A0MS04 114 aa10.29□□□□□ -0.76
SEMA4D-221ENST00000537934 OR52A4PA6NMU1 304 aa10.29□□□□□ -0.76
SEMA4D-221ENST00000537934 KCNAB3O43448 404 aa10.29□□□□□ -0.76
SEMA4D-221ENST00000537934 RCBTB2O95199 551 aa10.29□□□□□ -0.76
SEMA4D-221ENST00000537934 MAOAP21397 527 aa10.29□□□□□ -0.76
SEMA4D-221ENST00000537934 AQP2P41181 271 aa10.29□□□□□ -0.76
SEMA4D-221ENST00000537934 PCP4P48539 62 aa10.29□□□□□ -0.76
SEMA4D-221ENST00000537934 LSM6P62312 80 aaKnown RBP10.29□□□□□ -0.76
SEMA4D-221ENST00000537934 TFF2Q03403 129 aa10.29□□□□□ -0.76
SEMA4D-221ENST00000537934 GAMTQ14353 236 aa10.29□□□□□ -0.76
SEMA4D-221ENST00000537934 RSU1Q15404 277 aa10.29□□□□□ -0.76
SEMA4D-221ENST00000537934 SURF2Q15527 256 aaPredicted RBP10.29□□□□□ -0.76
SEMA4D-221ENST00000537934 TMEM52BQ4KMG9 183 aa10.29□□□□□ -0.76
SEMA4D-221ENST00000537934 YOD1Q5VVQ6 348 aaPredicted RBP10.29□□□□□ -0.76
SEMA4D-221ENST00000537934 NRSN1Q8IZ57 195 aa10.29□□□□□ -0.76
SEMA4D-221ENST00000537934 ZNF764Q96H86 408 aaPredicted RBP10.29□□□□□ -0.76
SEMA4D-221ENST00000537934 FKRPQ9H9S5 495 aa10.29□□□□□ -0.76
SEMA4D-221ENST00000537934 LMAN1LQ9HAT1 526 aa10.29□□□□□ -0.76
SEMA4D-221ENST00000537934 SLC7A7Q9UM01 511 aa10.29□□□□□ -0.76
SEMA4D-221ENST00000537934 PLXND1Q9Y4D7 1925 aa10.29□□□□□ -0.76
SEMA4D-221ENST00000537934 HLA-AP01891 365 aaKnown RBP10.28□□□□□ -0.76
SEMA4D-221ENST00000537934 FUT1P19526 365 aa10.28□□□□□ -0.76
SEMA4D-221ENST00000537934 RAB4AP20338 218 aa10.28□□□□□ -0.76
SEMA4D-221ENST00000537934 C5AR1P21730 350 aa10.28□□□□□ -0.76
SEMA4D-221ENST00000537934 PRSS3P35030 304 aa10.28□□□□□ -0.76
SEMA4D-221ENST00000537934 GPR1P46091 355 aa10.28□□□□□ -0.76
SEMA4D-221ENST00000537934 SLC6A9P48067 706 aa10.28□□□□□ -0.76
SEMA4D-221ENST00000537934 TAS2R19P59542 299 aa10.28□□□□□ -0.76
SEMA4D-221ENST00000537934 PLA2G7Q13093 441 aa10.28□□□□□ -0.76
SEMA4D-221ENST00000537934 TSTA3Q13630 321 aaPredicted RBP10.28□□□□□ -0.76
SEMA4D-221ENST00000537934 NR0B2Q15466 257 aa10.28□□□□□ -0.76
SEMA4D-221ENST00000537934 NKAIN2Q5VXU1 208 aa10.28□□□□□ -0.76
SEMA4D-221ENST00000537934 ZNF776Q68DI1 518 aaPredicted RBP10.28□□□□□ -0.76
SEMA4D-221ENST00000537934 BTNL8Q6UX41 500 aa10.28□□□□□ -0.76
SEMA4D-221ENST00000537934 FRRS1Q6ZNA5 592 aa10.28□□□□□ -0.76
SEMA4D-221ENST00000537934 LILRA3Q8N6C8 439 aaPredicted RBP10.28□□□□□ -0.76
SEMA4D-221ENST00000537934 PNLDC1Q8NA58 520 aaKnown RBP10.28□□□□□ -0.76
SEMA4D-221ENST00000537934 ZNF740Q8NDX6 193 aa10.28□□□□□ -0.76
SEMA4D-221ENST00000537934 RPS4Y2Q8TD47 263 aa10.28□□□□□ -0.76
SEMA4D-221ENST00000537934 HLA-CQ95604 372 aa10.28□□□□□ -0.76
SEMA4D-221ENST00000537934 TMEM159Q96B96 161 aa10.28□□□□□ -0.76
SEMA4D-221ENST00000537934 ZG16BQ96DA0 208 aa10.28□□□□□ -0.76
SEMA4D-221ENST00000537934 GUCD1Q96NT3 240 aa10.28□□□□□ -0.76
SEMA4D-221ENST00000537934 GDF2Q9UK05 429 aaPredicted RBP10.28□□□□□ -0.76
SEMA4D-221ENST00000537934 WASF3Q9UPY6 502 aa10.28□□□□□ -0.76
SEMA4D-221ENST00000537934 ADAM18Q9Y3Q7 739 aa10.28□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 60.8 ms