RNA–Protein interactions for RNA: ENST00000537582.1

SFSWAP-206, Transcript of splicing factor SWAP, humanhuman

TSL 2

Gene SFSWAP, Length 1,576 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SFSWAP-206ENST00000537582 MALT1Q9UDY8 824 aa13.77□□□□□ -0.21
SFSWAP-206ENST00000537582 NBASA2RRP1 2371 aa13.76□□□□□ -0.21
SFSWAP-206ENST00000537582 C12orf71A8MTZ7 269 aa13.76□□□□□ -0.21
SFSWAP-206ENST00000537582 ZNF587BE7ETH6 402 aa13.76□□□□□ -0.21
SFSWAP-206ENST00000537582 E9PLN8 166 aa13.76□□□□□ -0.21
SFSWAP-206ENST00000537582 MAGEB4O15481 346 aaPredicted RBP13.76□□□□□ -0.21
SFSWAP-206ENST00000537582 RGS10O43665 173 aa13.76□□□□□ -0.21
SFSWAP-206ENST00000537582 RAB36O95755 333 aa13.76□□□□□ -0.21
SFSWAP-206ENST00000537582 FADS2O95864 444 aaKnown RBP13.76□□□□□ -0.21
SFSWAP-206ENST00000537582 ITGA5P08648 1049 aa13.76□□□□□ -0.21
SFSWAP-206ENST00000537582 SPARCP09486 303 aa13.76□□□□□ -0.21
SFSWAP-206ENST00000537582 B4GALT1P15291 398 aa13.76□□□□□ -0.21
SFSWAP-206ENST00000537582 GNLYP22749 145 aa13.76□□□□□ -0.21
SFSWAP-206ENST00000537582 CTSSP25774 331 aa13.76□□□□□ -0.21
SFSWAP-206ENST00000537582 ETV1P50549 477 aa13.76□□□□□ -0.21
SFSWAP-206ENST00000537582 ADAM8P78325 824 aa13.76□□□□□ -0.21
SFSWAP-206ENST00000537582 ARF1P84077 181 aaKnown RBP13.76□□□□□ -0.21
SFSWAP-206ENST00000537582 TMED1Q13445 227 aa13.76□□□□□ -0.21
SFSWAP-206ENST00000537582 TSC22D1Q15714 1073 aa13.76□□□□□ -0.21
SFSWAP-206ENST00000537582 EIF2S3LQ2VIR3 472 aaKnown RBP13.76□□□□□ -0.21
SFSWAP-206ENST00000537582 KLHL22Q53GT1 634 aa13.76□□□□□ -0.21
SFSWAP-206ENST00000537582 ZNF773Q6PK81 442 aa13.76□□□□□ -0.21
SFSWAP-206ENST00000537582 CORO6Q6QEF8 472 aa13.76□□□□□ -0.21
SFSWAP-206ENST00000537582 FOXL2NBQ6ZUU3 175 aa13.76□□□□□ -0.21
SFSWAP-206ENST00000537582 DPY19L4Q7Z388 723 aa13.76□□□□□ -0.21
SFSWAP-206ENST00000537582 LHFPL3Q86UP9 236 aa13.76□□□□□ -0.21
SFSWAP-206ENST00000537582 SLC35F2Q8IXU6 374 aa13.76□□□□□ -0.21
SFSWAP-206ENST00000537582 ZNF843Q8N446 348 aa13.76□□□□□ -0.21
SFSWAP-206ENST00000537582 FNDC8Q8TC99 324 aa13.76□□□□□ -0.21
SFSWAP-206ENST00000537582 IPCEF1Q8WWN9 437 aaPredicted RBP13.76□□□□□ -0.21
SFSWAP-206ENST00000537582 TMEM80Q96HE8 168 aa13.76□□□□□ -0.21
SFSWAP-206ENST00000537582 SH3GL3Q99963 347 aa13.76□□□□□ -0.21
SFSWAP-206ENST00000537582 VKORC1Q9BQB6 163 aa13.76□□□□□ -0.21
SFSWAP-206ENST00000537582 ZNF649Q9BS31 505 aa13.76□□□□□ -0.21
SFSWAP-206ENST00000537582 TMEM38BQ9NVV0 291 aa13.76□□□□□ -0.21
SFSWAP-206ENST00000537582 KCNG2Q9UJ96 466 aa13.76□□□□□ -0.21
SFSWAP-206ENST00000537582 A0A1W2PQL4 384 aaPredicted RBP13.75□□□□□ -0.21
SFSWAP-206ENST00000537582 ZNF593O00488 134 aaPredicted RBP13.75□□□□□ -0.21
SFSWAP-206ENST00000537582 CCL21O00585 134 aa13.75□□□□□ -0.21
SFSWAP-206ENST00000537582 IL18BPO95998 194 aa13.75□□□□□ -0.21
SFSWAP-206ENST00000537582 IGHA1P01876 353 aa13.75□□□□□ -0.21
SFSWAP-206ENST00000537582 NR2C1P13056 603 aa13.75□□□□□ -0.21
SFSWAP-206ENST00000537582 BMP5P22003 454 aa13.75□□□□□ -0.21
SFSWAP-206ENST00000537582 RPL5P46777 297 aaKnown RBP13.75□□□□□ -0.21
SFSWAP-206ENST00000537582 ZNF84P51523 738 aa13.75□□□□□ -0.21
SFSWAP-206ENST00000537582 ZNF85Q03923 595 aa13.75□□□□□ -0.21
SFSWAP-206ENST00000537582 KLHL24Q6TFL4 600 aa13.75□□□□□ -0.21
SFSWAP-206ENST00000537582 SLC16A9Q7RTY1 509 aa13.75□□□□□ -0.21
SFSWAP-206ENST00000537582 ATCAYQ86WG3 371 aa13.75□□□□□ -0.21
SFSWAP-206ENST00000537582 SPARTQ8N0X7 666 aa13.75□□□□□ -0.21
SFSWAP-206ENST00000537582 LRRC18Q8N456 261 aa13.75□□□□□ -0.21
SFSWAP-206ENST00000537582 MYDGFQ969H8 173 aa13.75□□□□□ -0.21
SFSWAP-206ENST00000537582 FOXB1Q99853 325 aa13.75□□□□□ -0.21
SFSWAP-206ENST00000537582 PLSCR4Q9NRQ2 329 aa13.75□□□□□ -0.21
SFSWAP-206ENST00000537582 PROCRQ9UNN8 238 aa13.75□□□□□ -0.21
SFSWAP-206ENST00000537582 DIMT1Q9UNQ2 313 aaKnown RBP13.75□□□□□ -0.21
SFSWAP-206ENST00000537582 A0A096LPE4 126 aa13.75□□□□□ -0.21
SFSWAP-206ENST00000537582 A0A1W2PPZ6 126 aa13.75□□□□□ -0.21
SFSWAP-206ENST00000537582 RPL36A-HNRNPH2H7BZ11 118 aa13.75□□□□□ -0.21
SFSWAP-206ENST00000537582 PSMD9O00233 223 aa13.75□□□□□ -0.21
SFSWAP-206ENST00000537582 CRHP06850 196 aa13.75□□□□□ -0.21
SFSWAP-206ENST00000537582 PATE4P0C8F1 98 aa13.75□□□□□ -0.21
SFSWAP-206ENST00000537582 LIMS3P0CW19 117 aa13.75□□□□□ -0.21
SFSWAP-206ENST00000537582 LIMS4P0CW20 117 aa13.75□□□□□ -0.21
SFSWAP-206ENST00000537582 IGHV1-2P23083 117 aa13.75□□□□□ -0.21
SFSWAP-206ENST00000537582 ENTPD1P49961 510 aa13.75□□□□□ -0.21
SFSWAP-206ENST00000537582 CASP6P55212 293 aa13.75□□□□□ -0.21
SFSWAP-206ENST00000537582 ENDOGQ14249 297 aaKnown RBP13.75□□□□□ -0.21
SFSWAP-206ENST00000537582 IRF3Q14653 427 aa13.75□□□□□ -0.21
SFSWAP-206ENST00000537582 PRSS48Q7RTY5 328 aa13.75□□□□□ -0.21
SFSWAP-206ENST00000537582 LUZP2Q86TE4 346 aa13.75□□□□□ -0.21
SFSWAP-206ENST00000537582 FJX1Q86VR8 437 aa13.75□□□□□ -0.21
SFSWAP-206ENST00000537582 CDC20BQ86Y33 519 aa13.75□□□□□ -0.21
SFSWAP-206ENST00000537582 FGFBP3Q8TAT2 258 aa13.75□□□□□ -0.21
SFSWAP-206ENST00000537582 ZFAND2BQ8WV99 257 aa13.75□□□□□ -0.21
SFSWAP-206ENST00000537582 ZFP3Q96NJ6 502 aa13.75□□□□□ -0.21
SFSWAP-206ENST00000537582 ZNF416Q9BWM5 594 aa13.75□□□□□ -0.21
SFSWAP-206ENST00000537582 SFXN3Q9BWM7 321 aa13.75□□□□□ -0.21
SFSWAP-206ENST00000537582 NELFAQ9H3P2 528 aa13.75□□□□□ -0.21
SFSWAP-206ENST00000537582 LHFPL6Q9Y693 200 aa13.75□□□□□ -0.21
SFSWAP-206ENST00000537582 POLEQ07864 2286 aa13.74□□□□□ -0.21
SFSWAP-206ENST00000537582 PHF3Q92576 2039 aaKnown RBP13.74□□□□□ -0.21
SFSWAP-206ENST00000537582 OR6C65A6NJZ3 312 aa13.74□□□□□ -0.21
SFSWAP-206ENST00000537582 ZNF99A8MXY4 864 aaPredicted RBP13.74□□□□□ -0.21
SFSWAP-206ENST00000537582 LYZL6O75951 148 aa13.74□□□□□ -0.21
SFSWAP-206ENST00000537582 CLPTM1O96005 669 aa13.74□□□□□ -0.21
SFSWAP-206ENST00000537582 PTHP01270 115 aa13.74□□□□□ -0.21
SFSWAP-206ENST00000537582 ZNF823P16415 610 aa13.74□□□□□ -0.21
SFSWAP-206ENST00000537582 MSR1P21757 451 aa13.74□□□□□ -0.21
SFSWAP-206ENST00000537582 SH3BGRP55822 239 aaPredicted RBP13.74□□□□□ -0.21
SFSWAP-206ENST00000537582 MRPS34P82930 218 aaKnown RBP13.74□□□□□ -0.21
SFSWAP-206ENST00000537582 POU4F2Q12837 409 aa13.74□□□□□ -0.21
SFSWAP-206ENST00000537582 CNPY1Q3B7I2 92 aa13.74□□□□□ -0.21
SFSWAP-206ENST00000537582 OR2G6Q5TZ20 316 aa13.74□□□□□ -0.21
SFSWAP-206ENST00000537582 ZNF474Q6S9Z5 364 aaPredicted RBP13.74□□□□□ -0.21
SFSWAP-206ENST00000537582 ZNF813Q6ZN06 617 aa13.74□□□□□ -0.21
SFSWAP-206ENST00000537582 SPATC1Q76KD6 591 aa13.74□□□□□ -0.21
SFSWAP-206ENST00000537582 ACBD7Q8N6N7 88 aa13.74□□□□□ -0.21
SFSWAP-206ENST00000537582 RELL2Q8NC24 303 aaPredicted RBP13.74□□□□□ -0.21
SFSWAP-206ENST00000537582 ERVK13-1Q9NX77 482 aa13.74□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 40.6 ms