RNA–Protein interactions for RNA: ENST00000537068.5

SNHG1-204, Transcript of small nucleolar RNA host gene 1, humanhuman

TSL 5 BASIC

Gene SNHG1, Length 629 nt, Biotype lincRNA, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNHG1-204ENST00000537068 SLCO1B3Q9NPD5 702 aa4.44□□□□□ -1.7
SNHG1-204ENST00000537068 FZR1Q9UM11 496 aa4.44□□□□□ -1.7
SNHG1-204ENST00000537068 CACNG2Q9Y698 323 aa4.44□□□□□ -1.7
SNHG1-204ENST00000537068 MEGF8Q7Z7M0 2845 aa4.44□□□□□ -1.7
SNHG1-204ENST00000537068 LOC100509620A0A075B734 347 aa4.43□□□□□ -1.7
SNHG1-204ENST00000537068 A0A1W2PPW3 197 aa4.43□□□□□ -1.7
SNHG1-204ENST00000537068 TMEM82A0PJX8 343 aa4.43□□□□□ -1.7
SNHG1-204ENST00000537068 TMEM120BA0PK00 339 aa4.43□□□□□ -1.7
SNHG1-204ENST00000537068 C5orf58C9J3I9 102 aa4.43□□□□□ -1.7
SNHG1-204ENST00000537068 CLDN25C9JDP6 229 aa4.43□□□□□ -1.7
SNHG1-204ENST00000537068 C11orf98E9PRG8 122 aa4.43□□□□□ -1.7
SNHG1-204ENST00000537068 CLDN34H7C241 214 aa4.43□□□□□ -1.7
SNHG1-204ENST00000537068 CDC14BO60729 498 aa4.43□□□□□ -1.7
SNHG1-204ENST00000537068 SERPINB7O75635 380 aa4.43□□□□□ -1.7
SNHG1-204ENST00000537068 PRSS23O95084 383 aa4.43□□□□□ -1.7
SNHG1-204ENST00000537068 FARS2O95363 451 aaKnown RBP4.43□□□□□ -1.7
SNHG1-204ENST00000537068 TGDSO95455 350 aa4.43□□□□□ -1.7
SNHG1-204ENST00000537068 BCL10O95999 233 aa4.43□□□□□ -1.7
SNHG1-204ENST00000537068 IGHV1-46P01743 117 aa4.43□□□□□ -1.7
SNHG1-204ENST00000537068 LCKP06239 509 aa4.43□□□□□ -1.7
SNHG1-204ENST00000537068 QDPRP09417 244 aa4.43□□□□□ -1.7
SNHG1-204ENST00000537068 SLC6A2P23975 617 aa4.43□□□□□ -1.7
SNHG1-204ENST00000537068 PRTN3P24158 256 aa4.43□□□□□ -1.7
SNHG1-204ENST00000537068 FPR2P25090 351 aa4.43□□□□□ -1.7
SNHG1-204ENST00000537068 ZFP36P26651 326 aaKnown RBP4.43□□□□□ -1.7
SNHG1-204ENST00000537068 LSP1P33241 339 aa4.43□□□□□ -1.7
SNHG1-204ENST00000537068 LIPAP38571 399 aa4.43□□□□□ -1.7
SNHG1-204ENST00000537068 UGT2B15P54855 530 aa4.43□□□□□ -1.7
SNHG1-204ENST00000537068 RGS8P57771 180 aaPredicted RBP4.43□□□□□ -1.7
SNHG1-204ENST00000537068 MRPS34P82930 218 aaKnown RBP4.43□□□□□ -1.7
SNHG1-204ENST00000537068 EGR3Q06889 387 aa4.43□□□□□ -1.7
SNHG1-204ENST00000537068 SCARB2Q14108 478 aa4.43□□□□□ -1.7
SNHG1-204ENST00000537068 TBC1D28Q2M2D7 210 aa4.43□□□□□ -1.7
SNHG1-204ENST00000537068 HFEQ30201 348 aa4.43□□□□□ -1.7
SNHG1-204ENST00000537068 ALKBH6Q3KRA9 238 aa4.43□□□□□ -1.7
SNHG1-204ENST00000537068 RUNDC3AQ59EK9 446 aa4.43□□□□□ -1.7
SNHG1-204ENST00000537068 KLF17Q5JT82 389 aaPredicted RBP4.43□□□□□ -1.7
SNHG1-204ENST00000537068 ENTPD8Q5MY95 495 aa4.43□□□□□ -1.7
SNHG1-204ENST00000537068 CEP85LQ5SZL2 805 aa4.43□□□□□ -1.7
SNHG1-204ENST00000537068 GCNT6Q5T4J0 391 aa4.43□□□□□ -1.7
SNHG1-204ENST00000537068 FAM27BQ5VT28 67 aa4.43□□□□□ -1.7
SNHG1-204ENST00000537068 DCAF12L2Q5VW00 463 aa4.43□□□□□ -1.7
SNHG1-204ENST00000537068 NXNQ6DKJ4 435 aa4.43□□□□□ -1.7
SNHG1-204ENST00000537068 TMEM53Q6P2H8 277 aa4.43□□□□□ -1.7
SNHG1-204ENST00000537068 TMEM154Q6P9G4 183 aa4.43□□□□□ -1.7
SNHG1-204ENST00000537068 LHFPL2Q6ZUX7 228 aa4.43□□□□□ -1.7
SNHG1-204ENST00000537068 USP51Q70EK9 711 aa4.43□□□□□ -1.7
SNHG1-204ENST00000537068 DOK3Q7L591 496 aa4.43□□□□□ -1.7
SNHG1-204ENST00000537068 RANBP3LQ86VV4 465 aaPredicted RBP4.43□□□□□ -1.7
SNHG1-204ENST00000537068 KRT73Q86Y46 540 aa4.43□□□□□ -1.7
SNHG1-204ENST00000537068 PTOV1Q86YD1 416 aa4.43□□□□□ -1.7
SNHG1-204ENST00000537068 ZDHHC13Q8IUH4 622 aa4.43□□□□□ -1.7
SNHG1-204ENST00000537068 ARMC8Q8IUR7 673 aa4.43□□□□□ -1.7
SNHG1-204ENST00000537068 ZNF101Q8IZC7 436 aa4.43□□□□□ -1.7
SNHG1-204ENST00000537068 MIER2Q8N344 545 aa4.43□□□□□ -1.7
SNHG1-204ENST00000537068 LRRC17Q8N6Y2 441 aa4.43□□□□□ -1.7
SNHG1-204ENST00000537068 HIPK4Q8NE63 616 aa4.43□□□□□ -1.7
SNHG1-204ENST00000537068 DEFB108BQ8NET1 73 aa4.43□□□□□ -1.7
SNHG1-204ENST00000537068 GPR32P1Q8NGA4 272 aa4.43□□□□□ -1.7
SNHG1-204ENST00000537068 OR4K5Q8NGD3 323 aa4.43□□□□□ -1.7
SNHG1-204ENST00000537068 OR4D11Q8NGI4 311 aa4.43□□□□□ -1.7
SNHG1-204ENST00000537068 OR6T1Q8NGN1 323 aa4.43□□□□□ -1.7
SNHG1-204ENST00000537068 ADAMTS16Q8TE57 1224 aa4.43□□□□□ -1.7
SNHG1-204ENST00000537068 SNX33Q8WV41 574 aa4.43□□□□□ -1.7
SNHG1-204ENST00000537068 GTF3AQ92664 365 aaKnown RBP4.43□□□□□ -1.7
SNHG1-204ENST00000537068 RAB1CQ92928 201 aa4.43□□□□□ -1.7
SNHG1-204ENST00000537068 POP5Q969H6 163 aaKnown RBP4.43□□□□□ -1.7
SNHG1-204ENST00000537068 NABP1Q96AH0 204 aa4.43□□□□□ -1.7
SNHG1-204ENST00000537068 MPP4Q96JB8 637 aa4.43□□□□□ -1.7
SNHG1-204ENST00000537068 MCHR1Q99705 422 aa4.43□□□□□ -1.7
SNHG1-204ENST00000537068 SLC6A7Q99884 636 aa4.43□□□□□ -1.7
SNHG1-204ENST00000537068 PARD6BQ9BYG5 372 aa4.43□□□□□ -1.7
SNHG1-204ENST00000537068 KRTAP4-8Q9BYQ9 185 aa4.43□□□□□ -1.7
SNHG1-204ENST00000537068 PRDM13Q9H4Q3 707 aa4.43□□□□□ -1.7
SNHG1-204ENST00000537068 SAP30LQ9HAJ7 183 aa4.43□□□□□ -1.7
SNHG1-204ENST00000537068 SIAEQ9HAT2 523 aa4.43□□□□□ -1.7
SNHG1-204ENST00000537068 SMURF2Q9HAU4 748 aa4.43□□□□□ -1.7
SNHG1-204ENST00000537068 CDH20Q9HBT6 801 aa4.43□□□□□ -1.7
SNHG1-204ENST00000537068 MEPEQ9NQ76 525 aaPredicted RBP4.43□□□□□ -1.7
SNHG1-204ENST00000537068 NANSQ9NR45 359 aa4.43□□□□□ -1.7
SNHG1-204ENST00000537068 DECR2Q9NUI1 292 aa4.43□□□□□ -1.7
SNHG1-204ENST00000537068 FBXL7Q9UJT9 491 aa4.43□□□□□ -1.7
SNHG1-204ENST00000537068 LEF1Q9UJU2 399 aaPredicted RBP4.43□□□□□ -1.7
SNHG1-204ENST00000537068 ZNF229Q9UJW7 825 aa4.43□□□□□ -1.7
SNHG1-204ENST00000537068 RAB21Q9UL25 225 aa4.43□□□□□ -1.7
SNHG1-204ENST00000537068 CORO2BQ9UQ03 480 aa4.43□□□□□ -1.7
SNHG1-204ENST00000537068 PCDHGB1Q9Y5G3 927 aa4.43□□□□□ -1.7
SNHG1-204ENST00000537068 USH1CQ9Y6N9 552 aa4.43□□□□□ -1.7
SNHG1-204ENST00000537068 IGKV1D-43A0A0B4J1Z2 117 aa4.42□□□□□ -1.7
SNHG1-204ENST00000537068 IQCMA0A1B0GVH7 501 aa4.42□□□□□ -1.7
SNHG1-204ENST00000537068 TRAPPC13A5PLN9 417 aa4.42□□□□□ -1.7
SNHG1-204ENST00000537068 NPIPB13A6NJU9 1138 aa4.42□□□□□ -1.7
SNHG1-204ENST00000537068 A8MXK9 166 aa4.42□□□□□ -1.7
SNHG1-204ENST00000537068 NPIPB4C9JG80 1138 aa4.42□□□□□ -1.7
SNHG1-204ENST00000537068 F5H0A9 414 aaPredicted RBP4.42□□□□□ -1.7
SNHG1-204ENST00000537068 TRAPPC2LH3BP13 241 aa4.42□□□□□ -1.7
SNHG1-204ENST00000537068 H3BSA7 217 aa4.42□□□□□ -1.7
SNHG1-204ENST00000537068 M0QX08 132 aa4.42□□□□□ -1.7
SNHG1-204ENST00000537068 RNF13O43567 381 aa4.42□□□□□ -1.7
SNHG1-204ENST00000537068 TRMUO75648 421 aaKnown RBP4.42□□□□□ -1.7
Retrieved 100 of 20,778 RNA–protein pairs in 35.2 ms