RNA–Protein interactions for RNA: ENST00000537047.5

CCDC7-208, Transcript of coiled-coil domain containing 7, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CCDC7, Length 657 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC7-208ENST00000537047 ANKRD19PQ9H560 264 aa1.89□□□□□ -2.11
CCDC7-208ENST00000537047 UBE2ZQ9H832 354 aaPredicted RBP1.89□□□□□ -2.11
CCDC7-208ENST00000537047 ENOPH1Q9UHY7 261 aa1.89□□□□□ -2.11
CCDC7-208ENST00000537047 TMED5Q9Y3A6 229 aa1.89□□□□□ -2.11
CCDC7-208ENST00000537047 MMACHCQ9Y4U1 282 aa1.89□□□□□ -2.11
CCDC7-208ENST00000537047 PEX16Q9Y5Y5 336 aa1.89□□□□□ -2.11
CCDC7-208ENST00000537047 SHANK1Q9Y566 2161 aa1.89□□□□□ -2.11
CCDC7-208ENST00000537047 PPP1R2P9O14990 202 aa1.88□□□□□ -2.11
CCDC7-208ENST00000537047 ZNF207O43670 478 aaKnown RBP1.88□□□□□ -2.11
CCDC7-208ENST00000537047 CHST1O43916 411 aa1.88□□□□□ -2.11
CCDC7-208ENST00000537047 TIMM8AO60220 97 aaPredicted RBP1.88□□□□□ -2.11
CCDC7-208ENST00000537047 SNNO75324 88 aaPredicted RBP1.88□□□□□ -2.11
CCDC7-208ENST00000537047 GUCA1CO95843 209 aa1.88□□□□□ -2.11
CCDC7-208ENST00000537047 TSPAN12O95859 305 aa1.88□□□□□ -2.11
CCDC7-208ENST00000537047 CCNB1P14635 433 aa1.88□□□□□ -2.11
CCDC7-208ENST00000537047 RAB3BP20337 219 aa1.88□□□□□ -2.11
CCDC7-208ENST00000537047 COL8A2P25067 703 aa1.88□□□□□ -2.11
CCDC7-208ENST00000537047 TWF1Q12792 350 aa1.88□□□□□ -2.11
CCDC7-208ENST00000537047 SLC39A6Q13433 755 aa1.88□□□□□ -2.11
CCDC7-208ENST00000537047 PTPN20Q4JDL3 420 aa1.88□□□□□ -2.11
CCDC7-208ENST00000537047 UQCC3Q6UW78 93 aa1.88□□□□□ -2.11
CCDC7-208ENST00000537047 ZSCAN30Q86W11 494 aa1.88□□□□□ -2.11
CCDC7-208ENST00000537047 PSTKQ8IV42 348 aaKnown RBP1.88□□□□□ -2.11
CCDC7-208ENST00000537047 LILRB4Q8NHJ6 448 aa1.88□□□□□ -2.11
CCDC7-208ENST00000537047 RHEBL1Q8TAI7 183 aa1.88□□□□□ -2.11
CCDC7-208ENST00000537047 LINC01560Q8TB33 94 aa1.88□□□□□ -2.11
CCDC7-208ENST00000537047 CXorf40AQ8TE69 158 aa1.88□□□□□ -2.11
CCDC7-208ENST00000537047 NTAN1Q96AB6 310 aa1.88□□□□□ -2.11
CCDC7-208ENST00000537047 TRMT112Q9UI30 125 aaKnown RBP1.88□□□□□ -2.11
CCDC7-208ENST00000537047 HYOU1Q9Y4L1 999 aa1.88□□□□□ -2.11
CCDC7-208ENST00000537047 H0YCG3 227 aa1.87□□□□□ -2.11
CCDC7-208ENST00000537047 HAS3O00219 553 aa1.87□□□□□ -2.11
CCDC7-208ENST00000537047 YIF1AO95070 293 aa1.87□□□□□ -2.11
CCDC7-208ENST00000537047 IGHDP01880 384 aa1.87□□□□□ -2.11
CCDC7-208ENST00000537047 HLA-DQA1P01909 254 aa1.87□□□□□ -2.11
CCDC7-208ENST00000537047 PTMAP06454 111 aaKnown RBP1.87□□□□□ -2.11
CCDC7-208ENST00000537047 ZNF806P0C7X5 589 aa1.87□□□□□ -2.11
CCDC7-208ENST00000537047 IL1RNP18510 177 aa1.87□□□□□ -2.11
CCDC7-208ENST00000537047 DCKP27707 260 aa1.87□□□□□ -2.11
CCDC7-208ENST00000537047 IFNA8P32881 189 aa1.87□□□□□ -2.11
CCDC7-208ENST00000537047 AQP2P41181 271 aa1.87□□□□□ -2.11
CCDC7-208ENST00000537047 CXCL12P48061 93 aa1.87□□□□□ -2.11
CCDC7-208ENST00000537047 SAXO2Q658L1 398 aa1.87□□□□□ -2.11
CCDC7-208ENST00000537047 OR2A2Q6IF42 318 aa1.87□□□□□ -2.11
CCDC7-208ENST00000537047 ZFP1Q6P2D0 407 aa1.87□□□□□ -2.11
CCDC7-208ENST00000537047 DNAJC24Q6P3W2 148 aa1.87□□□□□ -2.11
CCDC7-208ENST00000537047 H2BFWTQ7Z2G1 175 aa1.87□□□□□ -2.11
CCDC7-208ENST00000537047 LIX1Q8N485 282 aa1.87□□□□□ -2.11
CCDC7-208ENST00000537047 EID2Q8N6I1 236 aa1.87□□□□□ -2.11
CCDC7-208ENST00000537047 OR1L4Q8NGR5 311 aa1.87□□□□□ -2.11
CCDC7-208ENST00000537047 OR10R2Q8NGX6 335 aa1.87□□□□□ -2.11
CCDC7-208ENST00000537047 OR8U1Q8NH10 309 aa1.87□□□□□ -2.11
CCDC7-208ENST00000537047 PIBF1Q8WXW3 757 aa1.87□□□□□ -2.11
CCDC7-208ENST00000537047 FLYWCH2Q96CP2 140 aaKnown RBP1.87□□□□□ -2.11
CCDC7-208ENST00000537047 NEURL3Q96EH8 262 aa1.87□□□□□ -2.11
CCDC7-208ENST00000537047 TBL1YQ9BQ87 522 aa1.87□□□□□ -2.11
CCDC7-208ENST00000537047 ERP44Q9BS26 406 aa1.87□□□□□ -2.11
CCDC7-208ENST00000537047 TIMM29Q9BSF4 260 aa1.87□□□□□ -2.11
CCDC7-208ENST00000537047 SAV1Q9H4B6 383 aaPredicted RBP1.87□□□□□ -2.11
CCDC7-208ENST00000537047 KCNJ16Q9NPI9 418 aa1.87□□□□□ -2.11
CCDC7-208ENST00000537047 FBXO6Q9NRD1 293 aaPredicted RBP1.87□□□□□ -2.11
CCDC7-208ENST00000537047 ADAMTS13Q76LX8 1427 aa1.86□□□□□ -2.11
CCDC7-208ENST00000537047 SNTNA6NMZ2 147 aa1.86□□□□□ -2.11
CCDC7-208ENST00000537047 A8MUU9 505 aa1.86□□□□□ -2.11
CCDC7-208ENST00000537047 BPY2O14599 106 aa1.86□□□□□ -2.11
CCDC7-208ENST00000537047 MTX2O75431 263 aa1.86□□□□□ -2.11
CCDC7-208ENST00000537047 C1orf105O95561 183 aa1.86□□□□□ -2.11
CCDC7-208ENST00000537047 WARSP23381 471 aaKnown RBP1.86□□□□□ -2.11
CCDC7-208ENST00000537047 SSTR5P35346 364 aa1.86□□□□□ -2.11
CCDC7-208ENST00000537047 CEBPDP49716 269 aaPredicted RBP1.86□□□□□ -2.11
CCDC7-208ENST00000537047 YWHAGP61981 247 aaKnown RBP eCLIP1.86□□□□□ -2.11
CCDC7-208ENST00000537047 ZNF77Q15935 545 aa1.86□□□□□ -2.11
CCDC7-208ENST00000537047 ORMDL2Q53FV1 153 aa1.86□□□□□ -2.11
CCDC7-208ENST00000537047 METTL21CQ5VZV1 264 aa1.86□□□□□ -2.11
CCDC7-208ENST00000537047 UNQ9165/PRO28630Q6UXU0 137 aa1.86□□□□□ -2.11
CCDC7-208ENST00000537047 SNX20Q7Z614 316 aa1.86□□□□□ -2.11
CCDC7-208ENST00000537047 GMCL1P1Q8NEA9 526 aa1.86□□□□□ -2.11
CCDC7-208ENST00000537047 STEAP2Q8NFT2 490 aa1.86□□□□□ -2.11
CCDC7-208ENST00000537047 OR4K5Q8NGD3 323 aa1.86□□□□□ -2.11
CCDC7-208ENST00000537047 OR13G1Q8NGZ3 307 aa1.86□□□□□ -2.11
CCDC7-208ENST00000537047 TBC1D31Q96DN5 1066 aa1.86□□□□□ -2.11
CCDC7-208ENST00000537047 NPTNQ9Y639 398 aa1.86□□□□□ -2.11
CCDC7-208ENST00000537047 ATP10AO60312 1499 aa1.86□□□□□ -2.11
CCDC7-208ENST00000537047 SCN1AP35498 2009 aa1.85□□□□□ -2.11
CCDC7-208ENST00000537047 TRAV6A0A075B6T7 132 aa1.85□□□□□ -2.11
CCDC7-208ENST00000537047 IGKV2-24A0A0C4DH68 120 aa1.85□□□□□ -2.11
CCDC7-208ENST00000537047 CLRN2A0PK11 232 aa1.85□□□□□ -2.11
CCDC7-208ENST00000537047 OR6C74A6NCV1 312 aa1.85□□□□□ -2.11
CCDC7-208ENST00000537047 NDC80O14777 642 aa1.85□□□□□ -2.11
CCDC7-208ENST00000537047 GCM2O75603 506 aaPredicted RBP1.85□□□□□ -2.11
CCDC7-208ENST00000537047 F2RP25116 425 aa1.85□□□□□ -2.11
CCDC7-208ENST00000537047 ZNF138P52744 262 aa1.85□□□□□ -2.11
CCDC7-208ENST00000537047 UBE2NP61088 152 aaKnown RBP1.85□□□□□ -2.11
CCDC7-208ENST00000537047 ACTG2P63267 376 aa1.85□□□□□ -2.11
CCDC7-208ENST00000537047 IRX3P78415 501 aaPredicted RBP1.85□□□□□ -2.11
CCDC7-208ENST00000537047 FLI1Q01543 452 aaPredicted RBP1.85□□□□□ -2.11
CCDC7-208ENST00000537047 PON2Q15165 354 aa1.85□□□□□ -2.11
CCDC7-208ENST00000537047 LRRC23Q53EV4 343 aaPredicted RBP1.85□□□□□ -2.11
CCDC7-208ENST00000537047 SPIN3Q5JUX0 258 aa1.85□□□□□ -2.11
CCDC7-208ENST00000537047 PLET1Q6UQ28 207 aa1.85□□□□□ -2.11
Retrieved 100 of 20,778 RNA–protein pairs in 25.6 ms