RNA–Protein interactions for RNA: ENST00000536871.6

SMG6-203, Transcript of SMG6, nonsense mediated mRNA decay factor, humanhuman

TSL 2 BASIC

Gene SMG6, Length 1,865 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG6-203ENST00000536871 WDR38Q5JTN6 314 aa12.17□□□□□ -0.46
SMG6-203ENST00000536871 LRRTM1Q86UE6 522 aa12.17□□□□□ -0.46
SMG6-203ENST00000536871 GTPBP8Q8N3Z3 284 aaPredicted RBP12.17□□□□□ -0.46
SMG6-203ENST00000536871 OR10H5Q8NGA6 315 aa12.17□□□□□ -0.46
SMG6-203ENST00000536871 OR2I1PQ8NGU4 316 aa12.17□□□□□ -0.46
SMG6-203ENST00000536871 POC1BQ8TC44 478 aa12.17□□□□□ -0.46
SMG6-203ENST00000536871 TSEN15Q8WW01 171 aaKnown RBP12.17□□□□□ -0.46
SMG6-203ENST00000536871 HSD17B8Q92506 261 aa12.17□□□□□ -0.46
SMG6-203ENST00000536871 MIB2Q96AX9 1013 aa12.17□□□□□ -0.46
SMG6-203ENST00000536871 SGCZQ96LD1 299 aa12.17□□□□□ -0.46
SMG6-203ENST00000536871 OXGR1Q96P68 337 aa12.17□□□□□ -0.46
SMG6-203ENST00000536871 GON7Q9BXV9 100 aa12.17□□□□□ -0.46
SMG6-203ENST00000536871 SLC17A5Q9NRA2 495 aa12.17□□□□□ -0.46
SMG6-203ENST00000536871 NUBP2Q9Y5Y2 271 aa12.17□□□□□ -0.46
SMG6-203ENST00000536871 HS3ST3B1Q9Y662 390 aa12.17□□□□□ -0.46
SMG6-203ENST00000536871 ADAMTS9Q9P2N4 1935 aa12.16□□□□□ -0.46
SMG6-203ENST00000536871 C2orf72A6NCS6 295 aa12.16□□□□□ -0.46
SMG6-203ENST00000536871 GABARAPH6UMI1 98 aa12.16□□□□□ -0.46
SMG6-203ENST00000536871 EIF1BO60739 113 aaKnown RBP12.16□□□□□ -0.46
SMG6-203ENST00000536871 ISG15P05161 165 aa12.16□□□□□ -0.46
SMG6-203ENST00000536871 CCL4P13236 92 aa12.16□□□□□ -0.46
SMG6-203ENST00000536871 ZNF28P17035 718 aa12.16□□□□□ -0.46
SMG6-203ENST00000536871 FSTP19883 344 aa12.16□□□□□ -0.46
SMG6-203ENST00000536871 ACHEP22303 614 aa12.16□□□□□ -0.46
SMG6-203ENST00000536871 DSCR4P56555 118 aaPredicted RBP12.16□□□□□ -0.46
SMG6-203ENST00000536871 GPR176Q14439 515 aa12.16□□□□□ -0.46
SMG6-203ENST00000536871 TATDN3Q17R31 274 aa12.16□□□□□ -0.46
SMG6-203ENST00000536871 TMEM244Q5VVB8 128 aa12.16□□□□□ -0.46
SMG6-203ENST00000536871 CATSPERDQ86XM0 798 aa12.16□□□□□ -0.46
SMG6-203ENST00000536871 PRSS35Q8N3Z0 413 aa12.16□□□□□ -0.46
SMG6-203ENST00000536871 PAQR8Q8TEZ7 354 aa12.16□□□□□ -0.46
SMG6-203ENST00000536871 SLC7A6Q92536 515 aa12.16□□□□□ -0.46
SMG6-203ENST00000536871 YIPF5Q969M3 257 aa12.16□□□□□ -0.46
SMG6-203ENST00000536871 HAVCR1Q96D42 359 aa12.16□□□□□ -0.46
SMG6-203ENST00000536871 CCDC86Q9H6F5 360 aaKnown RBP12.16□□□□□ -0.46
SMG6-203ENST00000536871 NIPAL2Q9H841 368 aa12.16□□□□□ -0.46
SMG6-203ENST00000536871 LIN7BQ9HAP6 207 aa12.16□□□□□ -0.46
SMG6-203ENST00000536871 NLKQ9UBE8 527 aa12.16□□□□□ -0.46
SMG6-203ENST00000536871 STEAP1Q9UHE8 339 aa12.16□□□□□ -0.46
SMG6-203ENST00000536871 PADI1Q9ULC6 663 aa12.16□□□□□ -0.46
SMG6-203ENST00000536871 DHDHQ9UQ10 334 aa12.16□□□□□ -0.46
SMG6-203ENST00000536871 TMA7Q9Y2S6 64 aaKnown RBP12.16□□□□□ -0.46
SMG6-203ENST00000536871 GJE1A6NN92 205 aa12.15□□□□□ -0.46
SMG6-203ENST00000536871 INMT-MINDY4F8WBC2 141 aa12.15□□□□□ -0.46
SMG6-203ENST00000536871 H3BML4 177 aa12.15□□□□□ -0.46
SMG6-203ENST00000536871 SHOXO15266 292 aa12.15□□□□□ -0.46
SMG6-203ENST00000536871 VAMP5O95183 116 aa12.15□□□□□ -0.46
SMG6-203ENST00000536871 PMS2P2O95744 297 aa12.15□□□□□ -0.46
SMG6-203ENST00000536871 UBCP0CG48 685 aaKnown RBP12.15□□□□□ -0.46
SMG6-203ENST00000536871 ZNF17P17021 662 aa12.15□□□□□ -0.46
SMG6-203ENST00000536871 MPLP40238 635 aa12.15□□□□□ -0.46
SMG6-203ENST00000536871 KIR3DL2P43630 455 aa12.15□□□□□ -0.46
SMG6-203ENST00000536871 ZFP69Q49AA0 526 aa12.15□□□□□ -0.46
SMG6-203ENST00000536871 PLA1AQ53H76 456 aa12.15□□□□□ -0.46
SMG6-203ENST00000536871 FAM199XQ6PEV8 388 aaPredicted RBP12.15□□□□□ -0.46
SMG6-203ENST00000536871 RPS19BP1Q86WX3 136 aaKnown RBP12.15□□□□□ -0.46
SMG6-203ENST00000536871 HIST2H2ABQ8IUE6 130 aaPredicted RBP12.15□□□□□ -0.46
SMG6-203ENST00000536871 CMTM4Q8IZR5 234 aa12.15□□□□□ -0.46
SMG6-203ENST00000536871 WDSUB1Q8N9V3 476 aa12.15□□□□□ -0.46
SMG6-203ENST00000536871 OR6X1Q8NH79 312 aa12.15□□□□□ -0.46
SMG6-203ENST00000536871 RHBDD1Q8TEB9 315 aa12.15□□□□□ -0.46
SMG6-203ENST00000536871 NTNG2Q96CW9 530 aa12.15□□□□□ -0.46
SMG6-203ENST00000536871 SLC25A44Q96H78 314 aaPredicted RBP12.15□□□□□ -0.46
SMG6-203ENST00000536871 DDA1Q9BW61 102 aa12.15□□□□□ -0.46
SMG6-203ENST00000536871 MRPL13Q9BYD1 178 aaKnown RBP12.15□□□□□ -0.46
SMG6-203ENST00000536871 SLC25A18Q9H1K4 315 aa12.15□□□□□ -0.46
SMG6-203ENST00000536871 CDV3Q9UKY7 258 aaKnown RBP12.15□□□□□ -0.46
SMG6-203ENST00000536871 HHLA2Q9UM44 414 aa12.15□□□□□ -0.46
SMG6-203ENST00000536871 M0R296 226 aa12.14□□□□□ -0.47
SMG6-203ENST00000536871 WISP1O95388 367 aa12.14□□□□□ -0.47
SMG6-203ENST00000536871 HLA-DOBP13765 273 aa12.14□□□□□ -0.47
SMG6-203ENST00000536871 SOX2P48431 317 aa12.14□□□□□ -0.47
SMG6-203ENST00000536871 AP2S1P53680 142 aaPredicted RBP12.14□□□□□ -0.47
SMG6-203ENST00000536871 MLF1P58340 268 aa12.14□□□□□ -0.47
SMG6-203ENST00000536871 MRPS15P82914 257 aaKnown RBP12.14□□□□□ -0.47
SMG6-203ENST00000536871 CARTPTQ16568 116 aa12.14□□□□□ -0.47
SMG6-203ENST00000536871 TBRG1Q3YBR2 411 aa12.14□□□□□ -0.47
SMG6-203ENST00000536871 HES5Q5TA89 166 aa12.14□□□□□ -0.47
SMG6-203ENST00000536871 GLT8D1Q68CQ7 371 aa12.14□□□□□ -0.47
SMG6-203ENST00000536871 TMEM156Q8N614 296 aa12.14□□□□□ -0.47
SMG6-203ENST00000536871 OR11G2Q8NGC1 345 aa12.14□□□□□ -0.47
SMG6-203ENST00000536871 GFI1Q99684 422 aa12.14□□□□□ -0.47
SMG6-203ENST00000536871 MESP1Q9BRJ9 268 aa12.14□□□□□ -0.47
SMG6-203ENST00000536871 MOB1AQ9H8S9 216 aa12.14□□□□□ -0.47
SMG6-203ENST00000536871 ING3Q9NXR8 418 aa12.14□□□□□ -0.47
SMG6-203ENST00000536871 EMC3Q9P0I2 261 aa12.14□□□□□ -0.47
SMG6-203ENST00000536871 LRP12Q9Y561 859 aa12.14□□□□□ -0.47
SMG6-203ENST00000536871 EXPH5Q8NEV8 1989 aa12.14□□□□□ -0.47
SMG6-203ENST00000536871 AQP7P3A6NL99 342 aa12.14□□□□□ -0.47
SMG6-203ENST00000536871 ACOT7O00154 380 aa12.14□□□□□ -0.47
SMG6-203ENST00000536871 DNPH1O43598 174 aa12.14□□□□□ -0.47
SMG6-203ENST00000536871 YES1P07947 543 aa12.14□□□□□ -0.47
SMG6-203ENST00000536871 ZNF43P17038 809 aa12.14□□□□□ -0.47
SMG6-203ENST00000536871 LAP3P28838 519 aa12.14□□□□□ -0.47
SMG6-203ENST00000536871 MMP16P51512 607 aa12.14□□□□□ -0.47
SMG6-203ENST00000536871 BIDP55957 195 aa12.14□□□□□ -0.47
SMG6-203ENST00000536871 CLRN1P58418 232 aa12.14□□□□□ -0.47
SMG6-203ENST00000536871 CHAF1BQ13112 559 aa12.14□□□□□ -0.47
SMG6-203ENST00000536871 ATAD3CQ5T2N8 411 aa12.14□□□□□ -0.47
SMG6-203ENST00000536871 TMEM225Q6GV28 225 aa12.14□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 25.8 ms