RNA–Protein interactions for RNA: ENST00000536710.1

PRKDC-208, Transcript of protein kinase, DNA-activated, catalytic subunit, human

TSL 4

Gene PRKDC, Length 554 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PRKDC-208	ENST00000536710	SRP72	O76094	671 aa	Known RBP	3.58	□□□□□ -1.84
PRKDC-208	ENST00000536710	CCNB2	O95067	398 aa		3.58	□□□□□ -1.84
PRKDC-208	ENST00000536710	FGFR1OP	O95684	399 aa	Known RBP	3.58	□□□□□ -1.84
PRKDC-208	ENST00000536710	RAB3D	O95716	219 aa		3.58	□□□□□ -1.84
PRKDC-208	ENST00000536710	GNAO1	P09471	354 aa		3.58	□□□□□ -1.84
PRKDC-208	ENST00000536710	PSG2	P11465	335 aa		3.58	□□□□□ -1.84
PRKDC-208	ENST00000536710	MGMT	P16455	207 aa		3.58	□□□□□ -1.84
PRKDC-208	ENST00000536710	GSTM3	P21266	225 aa		3.58	□□□□□ -1.84
PRKDC-208	ENST00000536710	HOXA9	P31269	272 aa		3.58	□□□□□ -1.84
PRKDC-208	ENST00000536710	NAMPT	P43490	491 aa		3.58	□□□□□ -1.84
PRKDC-208	ENST00000536710	CSNK1E	P49674	416 aa	Known RBP	3.58	□□□□□ -1.84
PRKDC-208	ENST00000536710	CRISP1	P54107	249 aa		3.58	□□□□□ -1.84
PRKDC-208	ENST00000536710	KRTAP10-3	P60369	221 aa		3.58	□□□□□ -1.84
PRKDC-208	ENST00000536710	ILK	Q13418	452 aa		3.58	□□□□□ -1.84
PRKDC-208	ENST00000536710	PSMD5	Q16401	504 aa		3.58	□□□□□ -1.84
PRKDC-208	ENST00000536710	SPECC1L	Q69YQ0	1117 aa		3.58	□□□□□ -1.84
PRKDC-208	ENST00000536710	ZNF530	Q6P9A1	599 aa	Predicted RBP	3.58	□□□□□ -1.84
PRKDC-208	ENST00000536710	KRTAP11-1	Q8IUC1	163 aa		3.58	□□□□□ -1.84
PRKDC-208	ENST00000536710	KATNAL2	Q8IYT4	538 aa		3.58	□□□□□ -1.84
PRKDC-208	ENST00000536710	COMMD1	Q8N668	190 aa		3.58	□□□□□ -1.84
PRKDC-208	ENST00000536710	EEF1AKMT3	Q96AZ1	226 aa		3.58	□□□□□ -1.84
PRKDC-208	ENST00000536710	C8orf44	Q96CB5	159 aa		3.58	□□□□□ -1.84
PRKDC-208	ENST00000536710	LRRC58	Q96CX6	371 aa		3.58	□□□□□ -1.84
PRKDC-208	ENST00000536710	DNAJC1	Q96KC8	554 aa	Known RBP	3.58	□□□□□ -1.84
PRKDC-208	ENST00000536710	XPO6	Q96QU8	1125 aa	Known RBP	3.58	□□□□□ -1.84
PRKDC-208	ENST00000536710	NEUROG2	Q9H2A3	272 aa		3.58	□□□□□ -1.84
PRKDC-208	ENST00000536710	NCOR1P1	Q9H4R4	102 aa		3.58	□□□□□ -1.84
PRKDC-208	ENST00000536710	PDP1	Q9P0J1	537 aa	Predicted RBP	3.58	□□□□□ -1.84
PRKDC-208	ENST00000536710	TBC1D24	Q9ULP9	559 aa		3.58	□□□□□ -1.84
PRKDC-208	ENST00000536710	ST3GAL6	Q9Y274	331 aa		3.58	□□□□□ -1.84
PRKDC-208	ENST00000536710	SLC17A4	Q9Y2C5	497 aa		3.58	□□□□□ -1.84
PRKDC-208	ENST00000536710	TTC41P	Q6P2S7	1318 aa		3.58	□□□□□ -1.84
PRKDC-208	ENST00000536710	RLF	Q13129	1914 aa		3.58	□□□□□ -1.84
PRKDC-208	ENST00000536710	IGHV3-64D	A0A0J9YX35	117 aa		3.57	□□□□□ -1.84
PRKDC-208	ENST00000536710		A0A1B0GW55	424 aa		3.57	□□□□□ -1.84
PRKDC-208	ENST00000536710	PLAC8L1	A1L4L8	177 aa		3.57	□□□□□ -1.84
PRKDC-208	ENST00000536710	LYRM9	A8MSI8	78 aa		3.57	□□□□□ -1.84
PRKDC-208	ENST00000536710	C11orf94	C9JXX5	98 aa		3.57	□□□□□ -1.84
PRKDC-208	ENST00000536710	ZNF646	O15015	1829 aa	Predicted RBP	3.57	□□□□□ -1.84
PRKDC-208	ENST00000536710	NUPL2	O15504	423 aa	Known RBP	3.57	□□□□□ -1.84
PRKDC-208	ENST00000536710	CTAG2	O75638	210 aa		3.57	□□□□□ -1.84
PRKDC-208	ENST00000536710	IGLV2-23	P01705	113 aa		3.57	□□□□□ -1.84
PRKDC-208	ENST00000536710	INSR	P06213	1382 aa		3.57	□□□□□ -1.84
PRKDC-208	ENST00000536710	DUX4L2	P0CJ85	424 aa		3.57	□□□□□ -1.84
PRKDC-208	ENST00000536710	DUX4L3	P0CJ86	424 aa		3.57	□□□□□ -1.84
PRKDC-208	ENST00000536710	DUX4L5	P0CJ88	424 aa		3.57	□□□□□ -1.84
PRKDC-208	ENST00000536710	DUX4L6	P0CJ89	424 aa		3.57	□□□□□ -1.84
PRKDC-208	ENST00000536710	DUX4L7	P0CJ90	424 aa		3.57	□□□□□ -1.84
PRKDC-208	ENST00000536710	MDK	P21741	143 aa	Predicted RBP	3.57	□□□□□ -1.84
PRKDC-208	ENST00000536710	PAX5	Q02548	391 aa		3.57	□□□□□ -1.84
PRKDC-208	ENST00000536710	MXD1	Q05195	221 aa		3.57	□□□□□ -1.84
PRKDC-208	ENST00000536710	GGTLC2	Q14390	218 aa		3.57	□□□□□ -1.84
PRKDC-208	ENST00000536710	RSPO1	Q2MKA7	263 aa	Predicted RBP	3.57	□□□□□ -1.84
PRKDC-208	ENST00000536710	DUX4L9	Q6RFH8	374 aa	Predicted RBP	3.57	□□□□□ -1.84
PRKDC-208	ENST00000536710	TEX43	Q6ZNM6	134 aa		3.57	□□□□□ -1.84
PRKDC-208	ENST00000536710	HDDC2	Q7Z4H3	204 aa		3.57	□□□□□ -1.84
PRKDC-208	ENST00000536710	TMEM150A	Q86TG1	271 aa		3.57	□□□□□ -1.84
PRKDC-208	ENST00000536710	TTC29	Q8NA56	475 aa	Predicted RBP	3.57	□□□□□ -1.84
PRKDC-208	ENST00000536710	DUSP18	Q8NEJ0	188 aa		3.57	□□□□□ -1.84
PRKDC-208	ENST00000536710	OR4S2	Q8NH73	311 aa		3.57	□□□□□ -1.84
PRKDC-208	ENST00000536710	ACTR3C	Q9C0K3	210 aa	Predicted RBP	3.57	□□□□□ -1.84
PRKDC-208	ENST00000536710	TMEM165	Q9HC07	324 aa		3.57	□□□□□ -1.84
PRKDC-208	ENST00000536710	DUX4	Q9UBX2	424 aa		3.57	□□□□□ -1.84
PRKDC-208	ENST00000536710	WSB1	Q9Y6I7	421 aa		3.57	□□□□□ -1.84
PRKDC-208	ENST00000536710	MEGF6	O75095	1541 aa		3.56	□□□□□ -1.84
PRKDC-208	ENST00000536710	AKNA	Q7Z591	1439 aa		3.56	□□□□□ -1.84
PRKDC-208	ENST00000536710	IGLV11-55	A0A075B6I3	123 aa		3.56	□□□□□ -1.84
PRKDC-208	ENST00000536710		H0YIV9	168 aa		3.56	□□□□□ -1.84
PRKDC-208	ENST00000536710	GOLGA8T	H3BQL2	631 aa		3.56	□□□□□ -1.84
PRKDC-208	ENST00000536710	ICOSLG	O75144	302 aa		3.56	□□□□□ -1.84
PRKDC-208	ENST00000536710	CLDN11	O75508	207 aa		3.56	□□□□□ -1.84
PRKDC-208	ENST00000536710	STAG3L3	P0CL85	134 aa		3.56	□□□□□ -1.84
PRKDC-208	ENST00000536710	ADRB3	P13945	408 aa		3.56	□□□□□ -1.84
PRKDC-208	ENST00000536710	CCNB1	P14635	433 aa		3.56	□□□□□ -1.84
PRKDC-208	ENST00000536710	CEACAM6	P40199	344 aa		3.56	□□□□□ -1.84
PRKDC-208	ENST00000536710	CDKN2B	P42772	138 aa		3.56	□□□□□ -1.84
PRKDC-208	ENST00000536710	SLC1A2	P43004	574 aa		3.56	□□□□□ -1.84
PRKDC-208	ENST00000536710	ZNF136	P52737	540 aa		3.56	□□□□□ -1.84
PRKDC-208	ENST00000536710	TRAM2	Q15035	370 aa		3.56	□□□□□ -1.84
PRKDC-208	ENST00000536710	OR7A5	Q15622	319 aa		3.56	□□□□□ -1.84
PRKDC-208	ENST00000536710	HSDL1	Q3SXM5	330 aa		3.56	□□□□□ -1.84
PRKDC-208	ENST00000536710	XKR4	Q5GH76	650 aa		3.56	□□□□□ -1.84
PRKDC-208	ENST00000536710	HES5	Q5TA89	166 aa		3.56	□□□□□ -1.84
PRKDC-208	ENST00000536710	NCCRP1	Q6ZVX7	275 aa	Predicted RBP	3.56	□□□□□ -1.84
PRKDC-208	ENST00000536710	OTUD6A	Q7L8S5	288 aa		3.56	□□□□□ -1.84
PRKDC-208	ENST00000536710	TMCO2	Q7Z6W1	182 aa	Predicted RBP	3.56	□□□□□ -1.84
PRKDC-208	ENST00000536710	MICU2	Q8IYU8	434 aa		3.56	□□□□□ -1.84
PRKDC-208	ENST00000536710	STPG2	Q8N412	459 aa		3.56	□□□□□ -1.84
PRKDC-208	ENST00000536710	ZFP41	Q8N8Y5	198 aa		3.56	□□□□□ -1.84
PRKDC-208	ENST00000536710	OR2A1	Q8NGT9	310 aa		3.56	□□□□□ -1.84
PRKDC-208	ENST00000536710	NUBPL	Q8TB37	319 aa		3.56	□□□□□ -1.84
PRKDC-208	ENST00000536710	LKAAEAR1	Q8TD35	194 aa		3.56	□□□□□ -1.84
PRKDC-208	ENST00000536710	GIMAP1	Q8WWP7	306 aa		3.56	□□□□□ -1.84
PRKDC-208	ENST00000536710	ZNF799	Q96GE5	643 aa		3.56	□□□□□ -1.84
PRKDC-208	ENST00000536710	CEP170P1	Q96L14	293 aa		3.56	□□□□□ -1.84
PRKDC-208	ENST00000536710	MICU1	Q9BPX6	476 aa		3.56	□□□□□ -1.84
PRKDC-208	ENST00000536710	ELOVL6	Q9H5J4	265 aa		3.56	□□□□□ -1.84
PRKDC-208	ENST00000536710	MTCH1	Q9NZJ7	389 aa		3.56	□□□□□ -1.84
PRKDC-208	ENST00000536710	MAPK8IP3	Q9UPT6	1336 aa		3.55	□□□□□ -1.84
PRKDC-208	ENST00000536710	KBTBD11-OT1	A0A1B0GTJ5	212 aa		3.55	□□□□□ -1.84

Retrieved 100 of 20,778 RNA–protein pairs in 26.5 ms