RNA–Protein interactions for RNA: ENST00000536545.5

HMGA2-206, Transcript of high mobility group AT-hook 2, humanhuman

TSL 1 (best) BASIC

Gene HMGA2, Length 1,788 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGA2-206ENST00000536545 LRP12Q9Y561 859 aa20.24■□□□□ 0.83
HMGA2-206ENST00000536545 TRBV5-7A0A0A0MS05 114 aa20.23■□□□□ 0.83
HMGA2-206ENST00000536545 SRD5A2P31213 254 aa20.23■□□□□ 0.83
HMGA2-206ENST00000536545 B3GALT5-AS1P59052 145 aa20.23■□□□□ 0.83
HMGA2-206ENST00000536545 THEM4Q5T1C6 240 aa20.23■□□□□ 0.83
HMGA2-206ENST00000536545 TMEM225Q6GV28 225 aa20.23■□□□□ 0.83
HMGA2-206ENST00000536545 JMJD6Q6NYC1 403 aaPredicted RBP20.23■□□□□ 0.83
HMGA2-206ENST00000536545 SPATC1Q76KD6 591 aa20.23■□□□□ 0.83
HMGA2-206ENST00000536545 CADM3Q8N126 398 aa20.23■□□□□ 0.83
HMGA2-206ENST00000536545 ZNF676Q8N7Q3 588 aa20.23■□□□□ 0.83
HMGA2-206ENST00000536545 OR4M1Q8NGD0 313 aa20.23■□□□□ 0.83
HMGA2-206ENST00000536545 OR10AC1Q8NH08 325 aa20.23■□□□□ 0.83
HMGA2-206ENST00000536545 RBP7Q96R05 134 aa20.23■□□□□ 0.83
HMGA2-206ENST00000536545 TRABD2BA6NFA1 517 aa20.23■□□□□ 0.83
HMGA2-206ENST00000536545 PDCD5O14737 125 aa20.23■□□□□ 0.83
HMGA2-206ENST00000536545 RBMS1P29558 406 aaKnown RBP20.23■□□□□ 0.83
HMGA2-206ENST00000536545 RIDAP52758 137 aaKnown RBP20.23■□□□□ 0.83
HMGA2-206ENST00000536545 CLRN1P58418 232 aa20.23■□□□□ 0.83
HMGA2-206ENST00000536545 MFGE8Q08431 387 aaPredicted RBP20.23■□□□□ 0.83
HMGA2-206ENST00000536545 TAB1Q15750 504 aa20.23■□□□□ 0.83
HMGA2-206ENST00000536545 OR7E24Q6IFN5 339 aa20.23■□□□□ 0.83
HMGA2-206ENST00000536545 CCBE1Q6UXH8 406 aaPredicted RBP20.23■□□□□ 0.83
HMGA2-206ENST00000536545 OR5H6Q8NGV6 325 aa20.23■□□□□ 0.83
HMGA2-206ENST00000536545 THOC3Q96J01 351 aaKnown RBP20.23■□□□□ 0.83
HMGA2-206ENST00000536545 PIGQQ9BRB3 760 aa20.23■□□□□ 0.83
HMGA2-206ENST00000536545 A0A0B4J203 849 aa20.22■□□□□ 0.83
HMGA2-206ENST00000536545 GPR171O14626 319 aa20.22■□□□□ 0.83
HMGA2-206ENST00000536545 SRSF10O75494 262 aaKnown RBP20.22■□□□□ 0.83
HMGA2-206ENST00000536545 PNPP00491 289 aa20.22■□□□□ 0.83
HMGA2-206ENST00000536545 SNRPBP14678 240 aaKnown RBP20.22■□□□□ 0.83
HMGA2-206ENST00000536545 ZNF43P17038 809 aa20.22■□□□□ 0.83
HMGA2-206ENST00000536545 RFX2P48378 723 aa20.22■□□□□ 0.83
HMGA2-206ENST00000536545 RAC1P63000 192 aa20.22■□□□□ 0.83
HMGA2-206ENST00000536545 CAMK2DQ13557 499 aa20.22■□□□□ 0.83
HMGA2-206ENST00000536545 DCXRQ7Z4W1 244 aa20.22■□□□□ 0.83
HMGA2-206ENST00000536545 Q8N402 240 aa20.22■□□□□ 0.83
HMGA2-206ENST00000536545 IL17RDQ8NFM7 739 aa20.22■□□□□ 0.83
HMGA2-206ENST00000536545 GPR148Q8TDV2 347 aa20.22■□□□□ 0.83
HMGA2-206ENST00000536545 C11orf40Q8WZ69 217 aa20.22■□□□□ 0.83
HMGA2-206ENST00000536545 NEURL2Q9BR09 285 aa20.22■□□□□ 0.83
HMGA2-206ENST00000536545 B3GNT4Q9C0J1 378 aa20.22■□□□□ 0.83
HMGA2-206ENST00000536545 DEPPQ9NTK1 212 aa20.22■□□□□ 0.83
HMGA2-206ENST00000536545 DOCK10Q96BY6 2186 aa20.22■□□□□ 0.83
HMGA2-206ENST00000536545 PCNX2A6NKB5 2137 aa20.21■□□□□ 0.83
HMGA2-206ENST00000536545 SOX2P48431 317 aa20.21■□□□□ 0.83
HMGA2-206ENST00000536545 CD97P48960 835 aa20.21■□□□□ 0.83
HMGA2-206ENST00000536545 CYB561P49447 251 aa20.21■□□□□ 0.83
HMGA2-206ENST00000536545 CATSPERDQ86XM0 798 aa20.21■□□□□ 0.83
HMGA2-206ENST00000536545 LINC00346Q8IVM7 164 aa20.21■□□□□ 0.83
HMGA2-206ENST00000536545 OR51A4Q8NGJ6 313 aa20.21■□□□□ 0.83
HMGA2-206ENST00000536545 A0A0G2JMP0 313 aa20.21■□□□□ 0.83
HMGA2-206ENST00000536545 A0A0X1KG70 313 aa20.21■□□□□ 0.83
HMGA2-206ENST00000536545 STMND1H3BQB6 276 aa20.21■□□□□ 0.83
HMGA2-206ENST00000536545 AIPO00170 330 aa20.21■□□□□ 0.83
HMGA2-206ENST00000536545 EIF1BO60739 113 aaKnown RBP20.21■□□□□ 0.83
HMGA2-206ENST00000536545 RAF1P04049 648 aa20.21■□□□□ 0.83
HMGA2-206ENST00000536545 GPR85P60893 370 aa20.21■□□□□ 0.83
HMGA2-206ENST00000536545 HIST3H3Q16695 136 aa20.21■□□□□ 0.83
HMGA2-206ENST00000536545 SLC25A47Q6Q0C1 308 aa20.21■□□□□ 0.83
HMGA2-206ENST00000536545 NRARPQ7Z6K4 114 aa20.21■□□□□ 0.83
HMGA2-206ENST00000536545 LRRTM1Q86UE6 522 aa20.21■□□□□ 0.83
HMGA2-206ENST00000536545 RDH10Q8IZV5 341 aa20.21■□□□□ 0.83
HMGA2-206ENST00000536545 OR4M2Q8NGB6 313 aa20.21■□□□□ 0.83
HMGA2-206ENST00000536545 KCNJ15Q99712 375 aa20.21■□□□□ 0.83
HMGA2-206ENST00000536545 TEKT2Q9UIF3 430 aa20.21■□□□□ 0.83
HMGA2-206ENST00000536545 CACNA1CQ13936 2221 aa20.2■□□□□ 0.82
HMGA2-206ENST00000536545 ARPC4-TTLL3A0A0A6YYG9 625 aa20.2■□□□□ 0.82
HMGA2-206ENST00000536545 LAP3P28838 519 aa20.2■□□□□ 0.82
HMGA2-206ENST00000536545 TALDO1P37837 337 aa20.2■□□□□ 0.82
HMGA2-206ENST00000536545 POU4F3Q15319 338 aa20.2■□□□□ 0.82
HMGA2-206ENST00000536545 STAC2Q6ZMT1 411 aa20.2■□□□□ 0.82
HMGA2-206ENST00000536545 RNF133Q8WVZ7 376 aa20.2■□□□□ 0.82
HMGA2-206ENST00000536545 BRD7Q9NPI1 651 aa20.2■□□□□ 0.82
HMGA2-206ENST00000536545 IL17BQ9UHF5 180 aa20.2■□□□□ 0.82
HMGA2-206ENST00000536545 SLC22A13Q9Y226 551 aa20.2■□□□□ 0.82
HMGA2-206ENST00000536545 R4GMQ9 66 aa20.2■□□□□ 0.82
HMGA2-206ENST00000536545 A0A0J9YW62 118 aa20.19■□□□□ 0.82
HMGA2-206ENST00000536545 IFITM5A6NNB3 132 aa20.19■□□□□ 0.82
HMGA2-206ENST00000536545 TMEM127O75204 238 aa20.19■□□□□ 0.82
HMGA2-206ENST00000536545 CSNK2A1P68400 391 aaPredicted RBP20.19■□□□□ 0.82
HMGA2-206ENST00000536545 DCAF10Q5QP82 559 aa20.19■□□□□ 0.82
HMGA2-206ENST00000536545 TRIQKQ629K1 86 aa20.19■□□□□ 0.82
HMGA2-206ENST00000536545 ZNF544Q6NX49 715 aa20.19■□□□□ 0.82
HMGA2-206ENST00000536545 DEGS2Q6QHC5 323 aa20.19■□□□□ 0.82
HMGA2-206ENST00000536545 LGALS14Q8TCE9 139 aa20.19■□□□□ 0.82
HMGA2-206ENST00000536545 THRSPQ92748 146 aa20.19■□□□□ 0.82
HMGA2-206ENST00000536545 MCHR2Q969V1 340 aa20.19■□□□□ 0.82
HMGA2-206ENST00000536545 SLITRK2Q9H156 845 aa20.19■□□□□ 0.82
HMGA2-206ENST00000536545 CYB5R1Q9UHQ9 305 aa20.19■□□□□ 0.82
HMGA2-206ENST00000536545 FBXL3Q9UKT7 428 aa20.19■□□□□ 0.82
HMGA2-206ENST00000536545 SPATA2Q9UM82 520 aa20.19■□□□□ 0.82
HMGA2-206ENST00000536545 KNTC1P50748 2209 aa20.19■□□□□ 0.82
HMGA2-206ENST00000536545 GJE1A6NN92 205 aa20.18■□□□□ 0.82
HMGA2-206ENST00000536545 LRP3O75074 770 aa20.18■□□□□ 0.82
HMGA2-206ENST00000536545 HNRNPCP07910 306 aaKnown RBP eCLIP20.18■□□□□ 0.821e-7■■■■□ 24.3
HMGA2-206ENST00000536545 RFPL3SP0C7P2 107 aa20.18■□□□□ 0.82
HMGA2-206ENST00000536545 ADRA2CP18825 462 aa20.18■□□□□ 0.82
HMGA2-206ENST00000536545 ODF4Q2M2E3 257 aa20.18■□□□□ 0.82
HMGA2-206ENST00000536545 CARD17Q5XLA6 110 aa20.18■□□□□ 0.82
HMGA2-206ENST00000536545 YRDCQ86U90 279 aaKnown RBP20.18■□□□□ 0.82
Retrieved 100 of 20,778 RNA–protein pairs in 22.3 ms