RNA–Protein interactions for RNA: ENST00000536513.5

ABCA4-207, Transcript of ATP binding cassette subfamily A member 4, humanhuman

TSL 1 (best) BASIC

Gene ABCA4, Length 3,740 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ABCA4-207ENST00000536513 RFKQ969G6 155 aa7.44□□□□□ -1.22
ABCA4-207ENST00000536513 S100PBPQ96BU1 408 aa7.44□□□□□ -1.22
ABCA4-207ENST00000536513 LINC00052Q96N35 136 aa7.44□□□□□ -1.22
ABCA4-207ENST00000536513 FBXO4Q9UKT5 387 aa7.44□□□□□ -1.22
ABCA4-207ENST00000536513 RASD1Q9Y272 281 aa7.44□□□□□ -1.22
ABCA4-207ENST00000536513 FARSAQ9Y285 508 aaKnown RBP7.44□□□□□ -1.22
ABCA4-207ENST00000536513 EPG5Q9HCE0 2579 aa7.44□□□□□ -1.22
ABCA4-207ENST00000536513 MAP1AP78559 2803 aaPredicted RBP7.44□□□□□ -1.22
ABCA4-207ENST00000536513 KANTRA0A1W2PQU2 76 aa7.44□□□□□ -1.22
ABCA4-207ENST00000536513 IRGMA1A4Y4 181 aa7.44□□□□□ -1.22
ABCA4-207ENST00000536513 SLC19A2O60779 497 aa7.44□□□□□ -1.22
ABCA4-207ENST00000536513 IFNGP01579 166 aa7.44□□□□□ -1.22
ABCA4-207ENST00000536513 CCNOP22674 350 aa7.44□□□□□ -1.22
ABCA4-207ENST00000536513 CBX5P45973 191 aa7.44□□□□□ -1.22
ABCA4-207ENST00000536513 PITPNBP48739 271 aa7.44□□□□□ -1.22
ABCA4-207ENST00000536513 EEF1A1P68104 462 aaKnown RBP7.44□□□□□ -1.22
ABCA4-207ENST00000536513 TLE3Q04726 772 aa7.44□□□□□ -1.22
ABCA4-207ENST00000536513 TSPAN31Q12999 210 aa7.44□□□□□ -1.22
ABCA4-207ENST00000536513 Q3ZCU0 254 aa7.44□□□□□ -1.22
ABCA4-207ENST00000536513 SYT14P1Q58G82 188 aa7.44□□□□□ -1.22
ABCA4-207ENST00000536513 BEX5Q5H9J7 111 aa7.44□□□□□ -1.22
ABCA4-207ENST00000536513 FHL5Q5TD97 284 aa7.44□□□□□ -1.22
ABCA4-207ENST00000536513 ZNF468Q5VIY5 522 aaPredicted RBP7.44□□□□□ -1.22
ABCA4-207ENST00000536513 ABHD17BQ5VST6 288 aa7.44□□□□□ -1.22
ABCA4-207ENST00000536513 METAP1DQ6UB28 335 aaPredicted RBP7.44□□□□□ -1.22
ABCA4-207ENST00000536513 COX15Q7KZN9 410 aa7.44□□□□□ -1.22
ABCA4-207ENST00000536513 TMEM17Q86X19 198 aa7.44□□□□□ -1.22
ABCA4-207ENST00000536513 RDH10Q8IZV5 341 aa7.44□□□□□ -1.22
ABCA4-207ENST00000536513 MS4A15Q8N5U1 240 aa7.44□□□□□ -1.22
ABCA4-207ENST00000536513 OR4C15Q8NGM1 316 aa7.44□□□□□ -1.22
ABCA4-207ENST00000536513 UPRTQ96BW1 309 aa7.44□□□□□ -1.22
ABCA4-207ENST00000536513 OPALINQ96PE5 141 aa7.44□□□□□ -1.22
ABCA4-207ENST00000536513 PELOQ9BRX2 385 aaKnown RBP7.44□□□□□ -1.22
ABCA4-207ENST00000536513 SEMA4CQ9C0C4 833 aa7.44□□□□□ -1.22
ABCA4-207ENST00000536513 MYOTQ9UBF9 498 aa7.44□□□□□ -1.22
ABCA4-207ENST00000536513 ZNF175Q9Y473 711 aa7.44□□□□□ -1.22
ABCA4-207ENST00000536513 NOTCH2Q04721 2471 aa7.44□□□□□ -1.22
ABCA4-207ENST00000536513 ZNF318Q5VUA4 2279 aa7.44□□□□□ -1.22
ABCA4-207ENST00000536513 TMED7-TICAM2A0A0A6YYA0 188 aa7.44□□□□□ -1.22
ABCA4-207ENST00000536513 F8W036 122 aa7.44□□□□□ -1.22
ABCA4-207ENST00000536513 SHOXO15266 292 aa7.44□□□□□ -1.22
ABCA4-207ENST00000536513 AK1P00568 194 aa7.44□□□□□ -1.22
ABCA4-207ENST00000536513 TCRBP04435 133 aa7.44□□□□□ -1.22
ABCA4-207ENST00000536513 P04436 131 aa7.44□□□□□ -1.22
ABCA4-207ENST00000536513 HBQ1P09105 142 aa7.44□□□□□ -1.22
ABCA4-207ENST00000536513 GDF1P27539 372 aa7.44□□□□□ -1.22
ABCA4-207ENST00000536513 OMPP47874 163 aa7.44□□□□□ -1.22
ABCA4-207ENST00000536513 BLOC1S1P78537 153 aa7.44□□□□□ -1.22
ABCA4-207ENST00000536513 PITPNAQ00169 270 aa7.44□□□□□ -1.22
ABCA4-207ENST00000536513 FOXK2Q01167 660 aa7.44□□□□□ -1.22
ABCA4-207ENST00000536513 PON3Q15166 354 aa7.44□□□□□ -1.22
ABCA4-207ENST00000536513 TAF13Q15543 124 aa7.44□□□□□ -1.22
ABCA4-207ENST00000536513 C3AR1Q16581 482 aa7.44□□□□□ -1.22
ABCA4-207ENST00000536513 PGGHGQ32M88 737 aa7.44□□□□□ -1.22
ABCA4-207ENST00000536513 PAN3Q58A45 887 aaKnown RBP7.44□□□□□ -1.22
ABCA4-207ENST00000536513 TIGD3Q6B0B8 471 aa7.44□□□□□ -1.22
ABCA4-207ENST00000536513 QSOX2Q6ZRP7 698 aa7.44□□□□□ -1.22
ABCA4-207ENST00000536513 NLRC3Q7RTR2 1065 aa7.44□□□□□ -1.22
ABCA4-207ENST00000536513 LINC00346Q8IVM7 164 aa7.44□□□□□ -1.22
ABCA4-207ENST00000536513 ZNF417Q8TAU3 575 aa7.44□□□□□ -1.22
ABCA4-207ENST00000536513 APH1BQ8WW43 257 aa7.44□□□□□ -1.22
ABCA4-207ENST00000536513 KIAA1143Q96AT1 154 aaPredicted RBP7.44□□□□□ -1.22
ABCA4-207ENST00000536513 MVB12AQ96EY5 273 aa7.44□□□□□ -1.22
ABCA4-207ENST00000536513 LRRC46Q96FV0 321 aa7.44□□□□□ -1.22
ABCA4-207ENST00000536513 ZNF587Q96SQ5 575 aaPredicted RBP7.44□□□□□ -1.22
ABCA4-207ENST00000536513 LDAHQ9H6V9 325 aa7.44□□□□□ -1.22
ABCA4-207ENST00000536513 BIN3Q9NQY0 253 aa7.44□□□□□ -1.22
ABCA4-207ENST00000536513 CNOT2Q9NZN8 540 aaKnown RBP7.44□□□□□ -1.22
ABCA4-207ENST00000536513 TMED7Q9Y3B3 224 aa7.44□□□□□ -1.22
ABCA4-207ENST00000536513 VSTM2BA6NLU5 285 aa7.43□□□□□ -1.22
ABCA4-207ENST00000536513 SIGLEC5O15389 551 aa7.43□□□□□ -1.22
ABCA4-207ENST00000536513 SLC16A7O60669 478 aa7.43□□□□□ -1.22
ABCA4-207ENST00000536513 TBX19O60806 448 aa7.43□□□□□ -1.22
ABCA4-207ENST00000536513 CCL3P10147 92 aa7.43□□□□□ -1.22
ABCA4-207ENST00000536513 APEHP13798 732 aaKnown RBP7.43□□□□□ -1.22
ABCA4-207ENST00000536513 HK1P19367 917 aa7.43□□□□□ -1.22
ABCA4-207ENST00000536513 SLC6A6P31641 620 aa7.43□□□□□ -1.22
ABCA4-207ENST00000536513 AP3S2P59780 193 aa7.43□□□□□ -1.22
ABCA4-207ENST00000536513 INSM1Q01101 510 aaPredicted RBP7.43□□□□□ -1.22
ABCA4-207ENST00000536513 FUT7Q11130 342 aa7.43□□□□□ -1.22
ABCA4-207ENST00000536513 FOXF1Q12946 379 aa7.43□□□□□ -1.22
ABCA4-207ENST00000536513 MLLT11Q13015 90 aaPredicted RBP7.43□□□□□ -1.22
ABCA4-207ENST00000536513 TMEM65Q6PI78 240 aa7.43□□□□□ -1.22
ABCA4-207ENST00000536513 NUP54Q7Z3B4 507 aa7.43□□□□□ -1.22
ABCA4-207ENST00000536513 GLRX5Q86SX6 157 aa7.43□□□□□ -1.22
ABCA4-207ENST00000536513 ZNF565Q8N9K5 539 aa7.43□□□□□ -1.22
ABCA4-207ENST00000536513 RELL2Q8NC24 303 aaPredicted RBP7.43□□□□□ -1.22
ABCA4-207ENST00000536513 OR11G2Q8NGC1 345 aa7.43□□□□□ -1.22
ABCA4-207ENST00000536513 ZPLD1Q8TCW7 415 aa7.43□□□□□ -1.22
ABCA4-207ENST00000536513 SLC25A46Q96AG3 418 aa7.43□□□□□ -1.22
ABCA4-207ENST00000536513 CTHRC1Q96CG8 243 aa7.43□□□□□ -1.22
ABCA4-207ENST00000536513 EAF1Q96JC9 268 aaPredicted RBP7.43□□□□□ -1.22
ABCA4-207ENST00000536513 ADAD1Q96M93 576 aaKnown RBP7.43□□□□□ -1.22
ABCA4-207ENST00000536513 USB1Q9BQ65 265 aaKnown RBP7.43□□□□□ -1.22
ABCA4-207ENST00000536513 PTGES2Q9H7Z7 377 aa7.43□□□□□ -1.22
ABCA4-207ENST00000536513 ASB6Q9NWX5 421 aa7.43□□□□□ -1.22
ABCA4-207ENST00000536513 SCP2D1Q9UJQ7 156 aa7.43□□□□□ -1.22
ABCA4-207ENST00000536513 FKBP7Q9Y680 259 aa7.43□□□□□ -1.22
ABCA4-207ENST00000536513 ZNF106Q9H2Y7 1883 aaKnown RBP7.43□□□□□ -1.22
ABCA4-207ENST00000536513 ZNF98A6NK75 572 aa7.43□□□□□ -1.22
Retrieved 100 of 20,778 RNA–protein pairs in 77.7 ms