RNA–Protein interactions for RNA: ENST00000536483.1

PRKDC-207, Transcript of protein kinase, DNA-activated, catalytic subunit, humanhuman

TSL 2

Gene PRKDC, Length 834 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKDC-207ENST00000536483 DAG1Q14118 895 aa10.71□□□□□ -0.69
PRKDC-207ENST00000536483 SLC36A2Q495M3 483 aa10.71□□□□□ -0.69
PRKDC-207ENST00000536483 FAM27BQ5VT28 67 aa10.71□□□□□ -0.69
PRKDC-207ENST00000536483 FAM122BQ7Z309 247 aa10.71□□□□□ -0.69
PRKDC-207ENST00000536483 RNF148Q8N7C7 305 aa10.71□□□□□ -0.69
PRKDC-207ENST00000536483 SYT14Q8NB59 555 aa10.71□□□□□ -0.69
PRKDC-207ENST00000536483 OR4K5Q8NGD3 323 aa10.71□□□□□ -0.69
PRKDC-207ENST00000536483 OR51A7Q8NH64 312 aa10.71□□□□□ -0.69
PRKDC-207ENST00000536483 POP5Q969H6 163 aaKnown RBP10.71□□□□□ -0.69
PRKDC-207ENST00000536483 MS4A3Q96HJ5 214 aa10.71□□□□□ -0.69
PRKDC-207ENST00000536483 RBP7Q96R05 134 aa10.71□□□□□ -0.69
PRKDC-207ENST00000536483 MYOZ1Q9NP98 299 aaPredicted RBP10.71□□□□□ -0.69
PRKDC-207ENST00000536483 IL1RAPQ9NPH3 570 aa10.71□□□□□ -0.69
PRKDC-207ENST00000536483 NRIP3Q9NQ35 241 aa10.71□□□□□ -0.69
PRKDC-207ENST00000536483 SIGLEC7Q9Y286 467 aa10.71□□□□□ -0.69
PRKDC-207ENST00000536483 SPEF1Q9Y4P9 236 aa10.71□□□□□ -0.69
PRKDC-207ENST00000536483 TRAV27A0A087WT01 109 aa10.7□□□□□ -0.7
PRKDC-207ENST00000536483 IGKV1D-43A0A0B4J1Z2 117 aa10.7□□□□□ -0.7
PRKDC-207ENST00000536483 SLC22A23A1A5C7 686 aa10.7□□□□□ -0.7
PRKDC-207ENST00000536483 SH3PXD2BA1X283 911 aa10.7□□□□□ -0.7
PRKDC-207ENST00000536483 LRP5LA4QPB2 252 aa10.7□□□□□ -0.7
PRKDC-207ENST00000536483 ARPC2O15144 300 aa10.7□□□□□ -0.7
PRKDC-207ENST00000536483 ICMTO60725 284 aa10.7□□□□□ -0.7
PRKDC-207ENST00000536483 ATP6V1G2O95670 118 aa10.7□□□□□ -0.7
PRKDC-207ENST00000536483 PTHP01270 115 aa10.7□□□□□ -0.7
PRKDC-207ENST00000536483 IGFBP1P08833 259 aaPredicted RBP10.7□□□□□ -0.7
PRKDC-207ENST00000536483 PTDSS1P48651 473 aaKnown RBP10.7□□□□□ -0.7
PRKDC-207ENST00000536483 PIGFQ07326 219 aa10.7□□□□□ -0.7
PRKDC-207ENST00000536483 NPRL3Q12980 569 aa10.7□□□□□ -0.7
PRKDC-207ENST00000536483 RAB39AQ14964 217 aa10.7□□□□□ -0.7
PRKDC-207ENST00000536483 CR1LQ2VPA4 569 aa10.7□□□□□ -0.7
PRKDC-207ENST00000536483 MTX3Q5HYI7 312 aa10.7□□□□□ -0.7
PRKDC-207ENST00000536483 LIPNQ5VXI9 398 aa10.7□□□□□ -0.7
PRKDC-207ENST00000536483 GPR139Q6DWJ6 353 aa10.7□□□□□ -0.7
PRKDC-207ENST00000536483 TMEM53Q6P2H8 277 aa10.7□□□□□ -0.7
PRKDC-207ENST00000536483 RRM2BQ7LG56 351 aa10.7□□□□□ -0.7
PRKDC-207ENST00000536483 SYT9Q86SS6 491 aa10.7□□□□□ -0.7
PRKDC-207ENST00000536483 DEFB107AQ8IZN7 70 aa10.7□□□□□ -0.7
PRKDC-207ENST00000536483 ZNF540Q8NDQ6 660 aa10.7□□□□□ -0.7
PRKDC-207ENST00000536483 OR13C2Q8NGS9 318 aa10.7□□□□□ -0.7
PRKDC-207ENST00000536483 MRPL24Q96A35 216 aaKnown RBP10.7□□□□□ -0.7
PRKDC-207ENST00000536483 NSMCE2Q96MF7 247 aa10.7□□□□□ -0.7
PRKDC-207ENST00000536483 TSPAN32Q96QS1 320 aa10.7□□□□□ -0.7
PRKDC-207ENST00000536483 SH3GL3Q99963 347 aa10.7□□□□□ -0.7
PRKDC-207ENST00000536483 MUC13Q9H3R2 512 aa10.7□□□□□ -0.7
PRKDC-207ENST00000536483 ACTR3BQ9P1U1 418 aa10.7□□□□□ -0.7
PRKDC-207ENST00000536483 SLC7A8Q9UHI5 535 aa10.7□□□□□ -0.7
PRKDC-207ENST00000536483 CMAHPQ9Y471 501 aa10.7□□□□□ -0.7
PRKDC-207ENST00000536483 TRBV4-1A0A0J9YWV2 114 aa10.69□□□□□ -0.7
PRKDC-207ENST00000536483 GSC2O15499 205 aa10.69□□□□□ -0.7
PRKDC-207ENST00000536483 NDUFB2O95178 105 aa10.69□□□□□ -0.7
PRKDC-207ENST00000536483 STAMBPO95630 424 aa10.69□□□□□ -0.7
PRKDC-207ENST00000536483 TXNDC12O95881 172 aa10.69□□□□□ -0.7
PRKDC-207ENST00000536483 PATE4P0C8F1 98 aa10.69□□□□□ -0.7
PRKDC-207ENST00000536483 MAGEA2P43356 314 aa10.69□□□□□ -0.7
PRKDC-207ENST00000536483 FXYD6P3P58550 94 aa10.69□□□□□ -0.7
PRKDC-207ENST00000536483 RPS23P62266 143 aaKnown RBP10.69□□□□□ -0.7
PRKDC-207ENST00000536483 SNTB2Q13425 540 aaKnown RBP10.69□□□□□ -0.7
PRKDC-207ENST00000536483 SEC23BQ15437 767 aa10.69□□□□□ -0.7
PRKDC-207ENST00000536483 MSMPQ1L6U9 139 aa10.69□□□□□ -0.7
PRKDC-207ENST00000536483 SLC16A14Q7RTX9 510 aa10.69□□□□□ -0.7
PRKDC-207ENST00000536483 ZER1Q7Z7L7 766 aa10.69□□□□□ -0.7
PRKDC-207ENST00000536483 ZCCHC24Q8N2G6 241 aaKnown RBP10.69□□□□□ -0.7
PRKDC-207ENST00000536483 OR1J2Q8NGS2 313 aa10.69□□□□□ -0.7
PRKDC-207ENST00000536483 NEU4Q8WWR8 484 aaPredicted RBP10.69□□□□□ -0.7
PRKDC-207ENST00000536483 NDEL1Q9GZM8 345 aa10.69□□□□□ -0.7
PRKDC-207ENST00000536483 RAB1BQ9H0U4 201 aa10.69□□□□□ -0.7
PRKDC-207ENST00000536483 TAS2R1Q9NYW7 299 aa10.69□□□□□ -0.7
PRKDC-207ENST00000536483 B2RBV5 119 aa10.68□□□□□ -0.7
PRKDC-207ENST00000536483 hCG_2039718K7EN88 272 aa10.68□□□□□ -0.7
PRKDC-207ENST00000536483 IMPA2O14732 288 aa10.68□□□□□ -0.7
PRKDC-207ENST00000536483 ARPC3O15145 178 aa10.68□□□□□ -0.7
PRKDC-207ENST00000536483 KRT36O76013 467 aa10.68□□□□□ -0.7
PRKDC-207ENST00000536483 SLC2A10O95528 541 aa10.68□□□□□ -0.7
PRKDC-207ENST00000536483 CST2P09228 141 aa10.68□□□□□ -0.7
PRKDC-207ENST00000536483 DAOP14920 347 aa10.68□□□□□ -0.7
PRKDC-207ENST00000536483 ZNF250P15622 560 aa10.68□□□□□ -0.7
PRKDC-207ENST00000536483 TCN1P20061 433 aaPredicted RBP10.68□□□□□ -0.7
PRKDC-207ENST00000536483 IL2RGP31785 369 aa10.68□□□□□ -0.7
PRKDC-207ENST00000536483 MSX2P35548 267 aaPredicted RBP10.68□□□□□ -0.7
PRKDC-207ENST00000536483 GPR4P46093 362 aa10.68□□□□□ -0.7
PRKDC-207ENST00000536483 MYBPC1Q00872 1141 aa10.68□□□□□ -0.7
PRKDC-207ENST00000536483 FMODQ06828 376 aa10.68□□□□□ -0.7
PRKDC-207ENST00000536483 DPY19L2P2Q6ZN68 376 aa10.68□□□□□ -0.7
PRKDC-207ENST00000536483 C1orf174Q8IYL3 243 aa10.68□□□□□ -0.7
PRKDC-207ENST00000536483 SLC30A7Q8NEW0 376 aa10.68□□□□□ -0.7
PRKDC-207ENST00000536483 MCUR1Q96AQ8 359 aa10.68□□□□□ -0.7
PRKDC-207ENST00000536483 C1orf159Q96HA4 380 aa10.68□□□□□ -0.7
PRKDC-207ENST00000536483 FAM46AQ96IP4 442 aaKnown RBP10.68□□□□□ -0.7
PRKDC-207ENST00000536483 GPA33Q99795 319 aa10.68□□□□□ -0.7
PRKDC-207ENST00000536483 KRCC1Q9NPI7 259 aaPredicted RBP10.68□□□□□ -0.7
PRKDC-207ENST00000536483 VSX1Q9NZR4 365 aaPredicted RBP10.68□□□□□ -0.7
PRKDC-207ENST00000536483 IGLV3-9A0A075B6K5 115 aa10.67□□□□□ -0.7
PRKDC-207ENST00000536483 TCRBV5S2A0A599 114 aa10.67□□□□□ -0.7
PRKDC-207ENST00000536483 PRSS37A4D1T9 235 aa10.67□□□□□ -0.7
PRKDC-207ENST00000536483 SYNGR3O43761 229 aa10.67□□□□□ -0.7
PRKDC-207ENST00000536483 LILRA1O75019 489 aa10.67□□□□□ -0.7
PRKDC-207ENST00000536483 GADD45GO95257 159 aa10.67□□□□□ -0.7
PRKDC-207ENST00000536483 FABP3P05413 133 aa10.67□□□□□ -0.7
PRKDC-207ENST00000536483 FPR3P25089 353 aa10.67□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 38.1 ms