RNA–Protein interactions for RNA: ENST00000536429.1

PRKDC-206, Transcript of protein kinase, DNA-activated, catalytic subunit, humanhuman

TSL 3

Gene PRKDC, Length 659 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKDC-206ENST00000536429 BIVMQ86UB2 503 aa11.34□□□□□ -0.59
PRKDC-206ENST00000536429 ADGRG5Q8IZF4 528 aa11.34□□□□□ -0.59
PRKDC-206ENST00000536429 SAMD8Q96LT4 415 aa11.34□□□□□ -0.59
PRKDC-206ENST00000536429 TSSK2Q96PF2 358 aa11.34□□□□□ -0.59
PRKDC-206ENST00000536429 DOK1Q99704 481 aa11.34□□□□□ -0.59
PRKDC-206ENST00000536429 SYT3Q9BQG1 590 aa11.34□□□□□ -0.59
PRKDC-206ENST00000536429 MRPL37Q9BZE1 423 aaKnown RBP11.34□□□□□ -0.59
PRKDC-206ENST00000536429 WNT5BQ9H1J7 359 aa11.34□□□□□ -0.59
PRKDC-206ENST00000536429 SYT4Q9H2B2 425 aa11.34□□□□□ -0.59
PRKDC-206ENST00000536429 OR52D1Q9H346 318 aa11.34□□□□□ -0.59
PRKDC-206ENST00000536429 MAGIXQ9H6Y5 334 aa11.34□□□□□ -0.59
PRKDC-206ENST00000536429 BARX1Q9HBU1 254 aaPredicted RBP11.34□□□□□ -0.59
PRKDC-206ENST00000536429 KRCC1Q9NPI7 259 aaPredicted RBP11.34□□□□□ -0.59
PRKDC-206ENST00000536429 POLE4Q9NR33 117 aa11.34□□□□□ -0.59
PRKDC-206ENST00000536429 MYEF2Q9P2K5 600 aaKnown RBP11.34□□□□□ -0.59
PRKDC-206ENST00000536429 TMCC3Q9ULS5 477 aa11.34□□□□□ -0.59
PRKDC-206ENST00000536429 SVEP1Q4LDE5 3571 aa11.33□□□□□ -0.6
PRKDC-206ENST00000536429 ENTPD5O75356 428 aa11.33□□□□□ -0.6
PRKDC-206ENST00000536429 KRT36O76013 467 aa11.33□□□□□ -0.6
PRKDC-206ENST00000536429 MPZL1O95297 269 aa11.33□□□□□ -0.6
PRKDC-206ENST00000536429 TXNDC12O95881 172 aa11.33□□□□□ -0.6
PRKDC-206ENST00000536429 GASTP01350 101 aa11.33□□□□□ -0.6
PRKDC-206ENST00000536429 NR2C1P13056 603 aa11.33□□□□□ -0.6
PRKDC-206ENST00000536429 EFNA4P52798 201 aa11.33□□□□□ -0.6
PRKDC-206ENST00000536429 PSG4Q00888 419 aa11.33□□□□□ -0.6
PRKDC-206ENST00000536429 HSF2Q03933 536 aa11.33□□□□□ -0.6
PRKDC-206ENST00000536429 GPR139Q6DWJ6 353 aa11.33□□□□□ -0.6
PRKDC-206ENST00000536429 CLEC9AQ6UXN8 241 aa11.33□□□□□ -0.6
PRKDC-206ENST00000536429 ZNF620Q6ZNG0 422 aa11.33□□□□□ -0.6
PRKDC-206ENST00000536429 DPPA2Q7Z7J5 298 aa11.33□□□□□ -0.6
PRKDC-206ENST00000536429 FNDC8Q8TC99 324 aa11.33□□□□□ -0.6
PRKDC-206ENST00000536429 GNPDA2Q8TDQ7 276 aa11.33□□□□□ -0.6
PRKDC-206ENST00000536429 MRPL24Q96A35 216 aaKnown RBP11.33□□□□□ -0.6
PRKDC-206ENST00000536429 ERMAPQ96PL5 475 aaPredicted RBP11.33□□□□□ -0.6
PRKDC-206ENST00000536429 VRK1Q99986 396 aaPredicted RBP11.33□□□□□ -0.6
PRKDC-206ENST00000536429 ZNF416Q9BWM5 594 aa11.33□□□□□ -0.6
PRKDC-206ENST00000536429 REG4Q9BYZ8 158 aa11.33□□□□□ -0.6
PRKDC-206ENST00000536429 OR2H1Q9GZK4 316 aa11.33□□□□□ -0.6
PRKDC-206ENST00000536429 NDEL1Q9GZM8 345 aa11.33□□□□□ -0.6
PRKDC-206ENST00000536429 RERGLQ9H628 205 aa11.33□□□□□ -0.6
PRKDC-206ENST00000536429 EGLN3Q9H6Z9 239 aa11.33□□□□□ -0.6
PRKDC-206ENST00000536429 CCNB1IP1Q9NPC3 277 aa11.33□□□□□ -0.6
PRKDC-206ENST00000536429 VSX1Q9NZR4 365 aaPredicted RBP11.33□□□□□ -0.6
PRKDC-206ENST00000536429 FBXL3Q9UKT7 428 aa11.33□□□□□ -0.6
PRKDC-206ENST00000536429 CMAHPQ9Y471 501 aa11.33□□□□□ -0.6
PRKDC-206ENST00000536429 PMF1-BGLAPU3KQ54 211 aa11.33□□□□□ -0.6
PRKDC-206ENST00000536429 U3KQV3 271 aa11.33□□□□□ -0.6
PRKDC-206ENST00000536429 FN1P02751 2386 aaKnown RBP11.33□□□□□ -0.6
PRKDC-206ENST00000536429 NSD1Q96L73 2696 aaPredicted RBP11.32□□□□□ -0.6
PRKDC-206ENST00000536429 NAV3Q8IVL0 2385 aa11.32□□□□□ -0.6
PRKDC-206ENST00000536429 LOC100509620A0A075B734 347 aa11.32□□□□□ -0.6
PRKDC-206ENST00000536429 A0A096LNT2 108 aa11.32□□□□□ -0.6
PRKDC-206ENST00000536429 DCTN6O00399 190 aa11.32□□□□□ -0.6
PRKDC-206ENST00000536429 GYG2O15488 501 aa11.32□□□□□ -0.6
PRKDC-206ENST00000536429 SLC16A7O60669 478 aa11.32□□□□□ -0.6
PRKDC-206ENST00000536429 CST2P09228 141 aa11.32□□□□□ -0.6
PRKDC-206ENST00000536429 HIST1H1CP16403 213 aaKnown RBP11.32□□□□□ -0.6
PRKDC-206ENST00000536429 MSR1P21757 451 aa11.32□□□□□ -0.6
PRKDC-206ENST00000536429 GLRXP35754 106 aa11.32□□□□□ -0.6
PRKDC-206ENST00000536429 WNT5AP41221 380 aa11.32□□□□□ -0.6
PRKDC-206ENST00000536429 ERFP50548 548 aa11.32□□□□□ -0.6
PRKDC-206ENST00000536429 GALK2Q01415 458 aa11.32□□□□□ -0.6
PRKDC-206ENST00000536429 KRTAP1-1Q07627 177 aa11.32□□□□□ -0.6
PRKDC-206ENST00000536429 TSPAN31Q12999 210 aa11.32□□□□□ -0.6
PRKDC-206ENST00000536429 MAD2L1BPQ15013 274 aaPredicted RBP11.32□□□□□ -0.6
PRKDC-206ENST00000536429 DNAL1Q4LDG9 190 aa11.32□□□□□ -0.6
PRKDC-206ENST00000536429 FAM98BQ52LJ0 330 aaKnown RBP11.32□□□□□ -0.6
PRKDC-206ENST00000536429 CLEC12AQ5QGZ9 265 aa11.32□□□□□ -0.6
PRKDC-206ENST00000536429 OR2T5Q6IEZ7 315 aa11.32□□□□□ -0.6
PRKDC-206ENST00000536429 ZNF774Q6NX45 483 aa11.32□□□□□ -0.6
PRKDC-206ENST00000536429 OR10H5Q8NGA6 315 aa11.32□□□□□ -0.6
PRKDC-206ENST00000536429 OR8D4Q8NGM9 314 aa11.32□□□□□ -0.6
PRKDC-206ENST00000536429 OR2T29Q8NH02 315 aa11.32□□□□□ -0.6
PRKDC-206ENST00000536429 CANT1Q8WVQ1 401 aa11.32□□□□□ -0.6
PRKDC-206ENST00000536429 POM121L2Q96KW2 1035 aa11.32□□□□□ -0.6
PRKDC-206ENST00000536429 LRGUKQ96M69 825 aa11.32□□□□□ -0.6
PRKDC-206ENST00000536429 IFT27Q9BW83 186 aa11.32□□□□□ -0.6
PRKDC-206ENST00000536429 CHID1Q9BWS9 393 aa11.32□□□□□ -0.6
PRKDC-206ENST00000536429 PLA2G12AQ9BZM1 189 aa11.32□□□□□ -0.6
PRKDC-206ENST00000536429 TRIM15Q9C019 465 aa11.32□□□□□ -0.6
PRKDC-206ENST00000536429 NUAK2Q9H093 628 aa11.32□□□□□ -0.6
PRKDC-206ENST00000536429 CDH20Q9HBT6 801 aa11.32□□□□□ -0.6
PRKDC-206ENST00000536429 SLC7A8Q9UHI5 535 aa11.32□□□□□ -0.6
PRKDC-206ENST00000536429 COA3Q9Y2R0 106 aaPredicted RBP11.32□□□□□ -0.6
PRKDC-206ENST00000536429 IQCMA0A1B0GVH7 501 aa11.31□□□□□ -0.6
PRKDC-206ENST00000536429 AHCYL1O43865 530 aa11.31□□□□□ -0.6
PRKDC-206ENST00000536429 CCNB2O95067 398 aa11.31□□□□□ -0.6
PRKDC-206ENST00000536429 CLPTM1O96005 669 aa11.31□□□□□ -0.6
PRKDC-206ENST00000536429 F12P00748 615 aaPredicted RBP11.31□□□□□ -0.6
PRKDC-206ENST00000536429 ADRA2AP08913 450 aa11.31□□□□□ -0.6
PRKDC-206ENST00000536429 BMP4P12644 408 aa11.31□□□□□ -0.6
PRKDC-206ENST00000536429 APEHP13798 732 aaKnown RBP11.31□□□□□ -0.6
PRKDC-206ENST00000536429 CCNOP22674 350 aa11.31□□□□□ -0.6
PRKDC-206ENST00000536429 STOMP27105 288 aa11.31□□□□□ -0.6
PRKDC-206ENST00000536429 SLC6A6P31641 620 aa11.31□□□□□ -0.6
PRKDC-206ENST00000536429 APLNRP35414 380 aa11.31□□□□□ -0.6
PRKDC-206ENST00000536429 IFNGR2P38484 337 aa11.31□□□□□ -0.6
PRKDC-206ENST00000536429 ALDH3B1P43353 468 aa11.31□□□□□ -0.6
PRKDC-206ENST00000536429 PPOXP50336 477 aa11.31□□□□□ -0.6
PRKDC-206ENST00000536429 RPS6KA3P51812 740 aa11.31□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 31.4 ms