RNA–Protein interactions for RNA: ENST00000535313.1

CLSTN3-204, Transcript of calsyntenin 3, humanhuman

TSL 2

Gene CLSTN3, Length 787 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLSTN3-204ENST00000535313 RAP1AP62834 184 aa13.84□□□□□ -0.19
CLSTN3-204ENST00000535313 CCL8P80075 99 aa13.84□□□□□ -0.19
CLSTN3-204ENST00000535313 KRTAP24-1Q3LI83 254 aa13.84□□□□□ -0.19
CLSTN3-204ENST00000535313 ANKDD1AQ495B1 522 aa13.84□□□□□ -0.19
CLSTN3-204ENST00000535313 IFI44LQ53G44 452 aa13.84□□□□□ -0.19
CLSTN3-204ENST00000535313 FAM27BQ5VT28 67 aa13.84□□□□□ -0.19
CLSTN3-204ENST00000535313 ZNF730Q6ZMV8 503 aa13.84□□□□□ -0.19
CLSTN3-204ENST00000535313 FKBP9P1Q75LS8 142 aa13.84□□□□□ -0.19
CLSTN3-204ENST00000535313 OAFQ86UD1 273 aa13.84□□□□□ -0.19
CLSTN3-204ENST00000535313 IGFN1Q86VF2 1251 aa13.84□□□□□ -0.19
CLSTN3-204ENST00000535313 GLCCI1Q86VQ1 547 aa13.84□□□□□ -0.19
CLSTN3-204ENST00000535313 ALDH16A1Q8IZ83 802 aa13.84□□□□□ -0.19
CLSTN3-204ENST00000535313 RNF113BQ8IZP6 322 aaKnown RBP13.84□□□□□ -0.19
CLSTN3-204ENST00000535313 OR1J1Q8NGS3 322 aa13.84□□□□□ -0.19
CLSTN3-204ENST00000535313 OR51A7Q8NH64 312 aa13.84□□□□□ -0.19
CLSTN3-204ENST00000535313 CLDND2Q8NHS1 167 aa13.84□□□□□ -0.19
CLSTN3-204ENST00000535313 NABP1Q96AH0 204 aa13.84□□□□□ -0.19
CLSTN3-204ENST00000535313 TSPAN32Q96QS1 320 aa13.84□□□□□ -0.19
CLSTN3-204ENST00000535313 HOPXQ9BPY8 73 aaPredicted RBP13.84□□□□□ -0.19
CLSTN3-204ENST00000535313 SNX13Q9Y5W8 968 aa13.84□□□□□ -0.19
CLSTN3-204ENST00000535313 TRAV27A0A087WT01 109 aa13.83□□□□□ -0.2
CLSTN3-204ENST00000535313 C5orf49A4QMS7 147 aa13.83□□□□□ -0.2
CLSTN3-204ENST00000535313 J3KTA2 159 aa13.83□□□□□ -0.2
CLSTN3-204ENST00000535313 NDUFAB1O14561 156 aa13.83□□□□□ -0.2
CLSTN3-204ENST00000535313 TPD52L2O43399 206 aaKnown RBP13.83□□□□□ -0.2
CLSTN3-204ENST00000535313 GCH1P30793 250 aa13.83□□□□□ -0.2
CLSTN3-204ENST00000535313 SLC9A3P48764 834 aa13.83□□□□□ -0.2
CLSTN3-204ENST00000535313 SLC7A2P52569 658 aa13.83□□□□□ -0.2
CLSTN3-204ENST00000535313 PCBD1P61457 104 aa13.83□□□□□ -0.2
CLSTN3-204ENST00000535313 ERVK-25P63136 954 aa13.83□□□□□ -0.2
CLSTN3-204ENST00000535313 PSG4Q00888 419 aa13.83□□□□□ -0.2
CLSTN3-204ENST00000535313 TEKQ02763 1124 aa13.83□□□□□ -0.2
CLSTN3-204ENST00000535313 PRKCDQ05655 676 aa13.83□□□□□ -0.2
CLSTN3-204ENST00000535313 LIPNQ5VXI9 398 aa13.83□□□□□ -0.2
CLSTN3-204ENST00000535313 MEX3DQ86XN8 651 aaKnown RBP13.83□□□□□ -0.2
CLSTN3-204ENST00000535313 AKR7LQ8NHP1 331 aa13.83□□□□□ -0.2
CLSTN3-204ENST00000535313 ACOT11Q8WXI4 607 aaPredicted RBP13.83□□□□□ -0.2
CLSTN3-204ENST00000535313 POM121L2Q96KW2 1035 aa13.83□□□□□ -0.2
CLSTN3-204ENST00000535313 RACGAP1Q9H0H5 632 aa13.83□□□□□ -0.2
CLSTN3-204ENST00000535313 EFCAB1Q9HAE3 211 aa13.83□□□□□ -0.2
CLSTN3-204ENST00000535313 MAN2C1Q9NTJ4 1040 aa13.83□□□□□ -0.2
CLSTN3-204ENST00000535313 DECR2Q9NUI1 292 aa13.83□□□□□ -0.2
CLSTN3-204ENST00000535313 NKIRAS2Q9NYR9 191 aa13.83□□□□□ -0.2
CLSTN3-204ENST00000535313 GMPR2Q9P2T1 348 aaKnown RBP13.83□□□□□ -0.2
CLSTN3-204ENST00000535313 FFAR1O14842 300 aa13.82□□□□□ -0.2
CLSTN3-204ENST00000535313 CDC14BO60729 498 aa13.82□□□□□ -0.2
CLSTN3-204ENST00000535313 RP2O75695 350 aa13.82□□□□□ -0.2
CLSTN3-204ENST00000535313 IGHV3-13P01766 116 aa13.82□□□□□ -0.2
CLSTN3-204ENST00000535313 CST2P09228 141 aa13.82□□□□□ -0.2
CLSTN3-204ENST00000535313 LAP3P28838 519 aa13.82□□□□□ -0.2
CLSTN3-204ENST00000535313 GLO1Q04760 184 aa13.82□□□□□ -0.2
CLSTN3-204ENST00000535313 ZNF718Q3SXZ3 478 aa13.82□□□□□ -0.2
CLSTN3-204ENST00000535313 RINLQ6ZS11 566 aa13.82□□□□□ -0.2
CLSTN3-204ENST00000535313 CBLL1Q75N03 491 aa13.82□□□□□ -0.2
CLSTN3-204ENST00000535313 RRM2BQ7LG56 351 aa13.82□□□□□ -0.2
CLSTN3-204ENST00000535313 CYP4Z1Q86W10 505 aa13.82□□□□□ -0.2
CLSTN3-204ENST00000535313 C1orf174Q8IYL3 243 aa13.82□□□□□ -0.2
CLSTN3-204ENST00000535313 CLDN22Q8N7P3 220 aa13.82□□□□□ -0.2
CLSTN3-204ENST00000535313 LRRC75AQ8NAA5 344 aa13.82□□□□□ -0.2
CLSTN3-204ENST00000535313 HSH2DQ96JZ2 352 aa13.82□□□□□ -0.2
CLSTN3-204ENST00000535313 OR2H1Q9GZK4 316 aa13.82□□□□□ -0.2
CLSTN3-204ENST00000535313 NDEL1Q9GZM8 345 aa13.82□□□□□ -0.2
CLSTN3-204ENST00000535313 TREM2Q9NZC2 230 aa13.82□□□□□ -0.2
CLSTN3-204ENST00000535313 TIMM10BQ9Y5J6 103 aa13.82□□□□□ -0.2
CLSTN3-204ENST00000535313 LOC100509620A0A075B734 347 aa13.81□□□□□ -0.2
CLSTN3-204ENST00000535313 IGHV1-69-2A0A0G2JMI3 117 aa13.81□□□□□ -0.2
CLSTN3-204ENST00000535313 A0A1W2PPL8 197 aa13.81□□□□□ -0.2
CLSTN3-204ENST00000535313 NME4O00746 187 aa13.81□□□□□ -0.2
CLSTN3-204ENST00000535313 SERPINA1P01009 418 aa13.81□□□□□ -0.2
CLSTN3-204ENST00000535313 FUT4P22083 530 aa13.81□□□□□ -0.2
CLSTN3-204ENST00000535313 RPL4P36578 427 aaKnown RBP13.81□□□□□ -0.2
CLSTN3-204ENST00000535313 ZNF81P51508 661 aa13.81□□□□□ -0.2
CLSTN3-204ENST00000535313 SRSF2Q01130 221 aaKnown RBP13.81□□□□□ -0.2
CLSTN3-204ENST00000535313 SPATA46Q5T0L3 261 aa13.81□□□□□ -0.2
CLSTN3-204ENST00000535313 MBOAT2Q6ZWT7 520 aa13.81□□□□□ -0.2
CLSTN3-204ENST00000535313 ZNF101Q8IZC7 436 aa13.81□□□□□ -0.2
CLSTN3-204ENST00000535313 RFLNBQ8N5W9 214 aa13.81□□□□□ -0.2
CLSTN3-204ENST00000535313 OR13C2Q8NGS9 318 aa13.81□□□□□ -0.2
CLSTN3-204ENST00000535313 FAM162AQ96A26 154 aa13.81□□□□□ -0.2
CLSTN3-204ENST00000535313 TMEM186Q96B77 213 aa13.81□□□□□ -0.2
CLSTN3-204ENST00000535313 C19orf24Q9BVV8 132 aa13.81□□□□□ -0.2
CLSTN3-204ENST00000535313 SAP30LQ9HAJ7 183 aa13.81□□□□□ -0.2
CLSTN3-204ENST00000535313 LPAR2Q9HBW0 351 aa13.81□□□□□ -0.2
CLSTN3-204ENST00000535313 HIF1ANQ9NWT6 349 aa13.81□□□□□ -0.2
CLSTN3-204ENST00000535313 GRHPRQ9UBQ7 328 aa13.81□□□□□ -0.2
CLSTN3-204ENST00000535313 GRIP1Q9Y3R0 1128 aa13.81□□□□□ -0.2
CLSTN3-204ENST00000535313 A0A087WUU8 490 aa13.8□□□□□ -0.2
CLSTN3-204ENST00000535313 PLSCR5A0PG75 271 aa13.8□□□□□ -0.2
CLSTN3-204ENST00000535313 C12orf71A8MTZ7 269 aa13.8□□□□□ -0.2
CLSTN3-204ENST00000535313 FAM157AC9JC47 383 aa13.8□□□□□ -0.2
CLSTN3-204ENST00000535313 XKRYO14609 159 aa13.8□□□□□ -0.2
CLSTN3-204ENST00000535313 WNT9BO14905 357 aa13.8□□□□□ -0.2
CLSTN3-204ENST00000535313 TCF21O43680 179 aa13.8□□□□□ -0.2
CLSTN3-204ENST00000535313 MSMBP08118 114 aa13.8□□□□□ -0.2
CLSTN3-204ENST00000535313 GAAP10253 952 aa13.8□□□□□ -0.2
CLSTN3-204ENST00000535313 MSR1P21757 451 aa13.8□□□□□ -0.2
CLSTN3-204ENST00000535313 WNT5AP41221 380 aa13.8□□□□□ -0.2
CLSTN3-204ENST00000535313 CRYBB2P43320 205 aa13.8□□□□□ -0.2
CLSTN3-204ENST00000535313 GPR4P46093 362 aa13.8□□□□□ -0.2
CLSTN3-204ENST00000535313 GSK3BP49841 420 aa13.8□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 49.5 ms