RNA–Protein interactions for RNA: ENST00000534106.2

CHMP4A-208, Transcript of charged multivesicular body protein 4A, humanhuman

TSL 5

Gene CHMP4A, Length 370 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP4A-208ENST00000534106 CDS1Q92903 461 aa2.46□□□□□ -2.02
CHMP4A-208ENST00000534106 POP5Q969H6 163 aaKnown RBP2.46□□□□□ -2.02
CHMP4A-208ENST00000534106 COQ8BQ96D53 544 aa2.46□□□□□ -2.02
CHMP4A-208ENST00000534106 ERP27Q96DN0 273 aa2.46□□□□□ -2.02
CHMP4A-208ENST00000534106 CCDC126Q96EE4 140 aa2.46□□□□□ -2.02
CHMP4A-208ENST00000534106 EGLN2Q96KS0 407 aa2.46□□□□□ -2.02
CHMP4A-208ENST00000534106 AMDHD1Q96NU7 426 aa2.46□□□□□ -2.02
CHMP4A-208ENST00000534106 GPR78Q96P69 363 aa2.46□□□□□ -2.02
CHMP4A-208ENST00000534106 ALKBH3Q96Q83 286 aaPredicted RBP2.46□□□□□ -2.02
CHMP4A-208ENST00000534106 FYTTD1Q96QD9 318 aaKnown RBP2.46□□□□□ -2.02
CHMP4A-208ENST00000534106 KCNA7Q96RP8 456 aa2.46□□□□□ -2.02
CHMP4A-208ENST00000534106 FMO2Q99518 471 aa2.46□□□□□ -2.02
CHMP4A-208ENST00000534106 GAL3ST1Q99999 423 aa2.46□□□□□ -2.02
CHMP4A-208ENST00000534106 SLC30A2Q9BRI3 323 aa2.46□□□□□ -2.02
CHMP4A-208ENST00000534106 CCDC106Q9BWC9 280 aa2.46□□□□□ -2.02
CHMP4A-208ENST00000534106 ZNF416Q9BWM5 594 aa2.46□□□□□ -2.02
CHMP4A-208ENST00000534106 LAT2Q9GZY6 243 aa2.46□□□□□ -2.02
CHMP4A-208ENST00000534106 MMP28Q9H239 520 aa2.46□□□□□ -2.02
CHMP4A-208ENST00000534106 RHOJQ9H4E5 214 aa2.46□□□□□ -2.02
CHMP4A-208ENST00000534106 ELOVL6Q9H5J4 265 aa2.46□□□□□ -2.02
CHMP4A-208ENST00000534106 POPDC3Q9HBV1 291 aa2.46□□□□□ -2.02
CHMP4A-208ENST00000534106 HINT3Q9NQE9 182 aaKnown RBP2.46□□□□□ -2.02
CHMP4A-208ENST00000534106 UBQLN4Q9NRR5 601 aa2.46□□□□□ -2.02
CHMP4A-208ENST00000534106 INTS9Q9NV88 658 aaKnown RBP2.46□□□□□ -2.02
CHMP4A-208ENST00000534106 NKIRAS1Q9NYS0 192 aa2.46□□□□□ -2.02
CHMP4A-208ENST00000534106 KIF17Q9P2E2 1029 aa2.46□□□□□ -2.02
CHMP4A-208ENST00000534106 CPSF2Q9P2I0 782 aaKnown RBP2.46□□□□□ -2.02
CHMP4A-208ENST00000534106 STEAP1Q9UHE8 339 aa2.46□□□□□ -2.02
CHMP4A-208ENST00000534106 MRTO4Q9UKD2 239 aaKnown RBP2.46□□□□□ -2.02
CHMP4A-208ENST00000534106 TEX264Q9Y6I9 313 aa2.46□□□□□ -2.02
CHMP4A-208ENST00000534106 EXPH5Q8NEV8 1989 aa2.46□□□□□ -2.02
CHMP4A-208ENST00000534106 ALMS1Q8TCU4 4167 aa2.46□□□□□ -2.02
CHMP4A-208ENST00000534106 KMT2AQ03164 3969 aa2.45□□□□□ -2.02
CHMP4A-208ENST00000534106 A0A096LPK6 155 aa2.45□□□□□ -2.02
CHMP4A-208ENST00000534106 ARPC4-TTLL3A0A0A6YYG9 625 aa2.45□□□□□ -2.02
CHMP4A-208ENST00000534106 TRAV40A0A0B4J280 105 aa2.45□□□□□ -2.02
CHMP4A-208ENST00000534106 A0A1W2PQD3 144 aa2.45□□□□□ -2.02
CHMP4A-208ENST00000534106 AQP12BA6NM10 295 aa2.45□□□□□ -2.02
CHMP4A-208ENST00000534106 CLDN24A6NM45 220 aa2.45□□□□□ -2.02
CHMP4A-208ENST00000534106 C17orf100A8MU93 164 aa2.45□□□□□ -2.02
CHMP4A-208ENST00000534106 C3orf84H3BNL1 204 aa2.45□□□□□ -2.02
CHMP4A-208ENST00000534106 AP4M1O00189 453 aa2.45□□□□□ -2.02
CHMP4A-208ENST00000534106 GPR171O14626 319 aa2.45□□□□□ -2.02
CHMP4A-208ENST00000534106 DNALI1O14645 258 aaPredicted RBP2.45□□□□□ -2.02
CHMP4A-208ENST00000534106 SPRY3O43610 288 aa2.45□□□□□ -2.02
CHMP4A-208ENST00000534106 FCMRO60667 390 aa2.45□□□□□ -2.02
CHMP4A-208ENST00000534106 SPAG7O75391 227 aa2.45□□□□□ -2.02
CHMP4A-208ENST00000534106 FOXH1O75593 365 aa2.45□□□□□ -2.02
CHMP4A-208ENST00000534106 ZNF432O94892 652 aa2.45□□□□□ -2.02
CHMP4A-208ENST00000534106 OR4F21O95013 312 aa2.45□□□□□ -2.02
CHMP4A-208ENST00000534106 ATP6V1G2O95670 118 aa2.45□□□□□ -2.02
CHMP4A-208ENST00000534106 IGHMP01871 453 aa2.45□□□□□ -2.02
CHMP4A-208ENST00000534106 SHBGP04278 402 aa2.45□□□□□ -2.02
CHMP4A-208ENST00000534106 SFTPBP07988 381 aa2.45□□□□□ -2.02
CHMP4A-208ENST00000534106 ANXA4P09525 319 aaPredicted RBP2.45□□□□□ -2.02
CHMP4A-208ENST00000534106 ALOX5P09917 674 aa2.45□□□□□ -2.02
CHMP4A-208ENST00000534106 UBTFL6P0CB48 400 aaPredicted RBP2.45□□□□□ -2.02
CHMP4A-208ENST00000534106 OR8G3PP0DMU2 310 aa2.45□□□□□ -2.02
CHMP4A-208ENST00000534106 CD79AP11912 226 aa2.45□□□□□ -2.02
CHMP4A-208ENST00000534106 ZNF14P17017 642 aaPredicted RBP2.45□□□□□ -2.02
CHMP4A-208ENST00000534106 CALRP27797 417 aaKnown RBP2.45□□□□□ -2.02
CHMP4A-208ENST00000534106 SSTR1P30872 391 aa2.45□□□□□ -2.02
CHMP4A-208ENST00000534106 HOXD3P31249 432 aaPredicted RBP2.45□□□□□ -2.02
CHMP4A-208ENST00000534106 GLRXP35754 106 aa2.45□□□□□ -2.02
CHMP4A-208ENST00000534106 RPL4P36578 427 aaKnown RBP2.45□□□□□ -2.02
CHMP4A-208ENST00000534106 EVX1P49640 407 aa2.45□□□□□ -2.02
CHMP4A-208ENST00000534106 TIRAPP58753 221 aa2.45□□□□□ -2.02
CHMP4A-208ENST00000534106 TRA2BP62995 288 aaKnown RBP2.45□□□□□ -2.02
CHMP4A-208ENST00000534106 CSNK2A1P68400 391 aaPredicted RBP2.45□□□□□ -2.02
CHMP4A-208ENST00000534106 PSPHP78330 225 aa2.45□□□□□ -2.02
CHMP4A-208ENST00000534106 MRPS11P82912 194 aaKnown RBP2.45□□□□□ -2.02
CHMP4A-208ENST00000534106 ROR2Q01974 943 aaKnown RBP2.45□□□□□ -2.02
CHMP4A-208ENST00000534106 PAX2Q02962 417 aa2.45□□□□□ -2.02
CHMP4A-208ENST00000534106 BNIP2Q12982 314 aa2.45□□□□□ -2.02
CHMP4A-208ENST00000534106 PDIA2Q13087 525 aaKnown RBP2.45□□□□□ -2.02
CHMP4A-208ENST00000534106 SKP2Q13309 424 aa2.45□□□□□ -2.02
CHMP4A-208ENST00000534106 CEACAM7Q14002 265 aa2.45□□□□□ -2.02
CHMP4A-208ENST00000534106 RASA2Q15283 850 aa2.45□□□□□ -2.02
CHMP4A-208ENST00000534106 TAF11Q15544 211 aa2.45□□□□□ -2.02
CHMP4A-208ENST00000534106 MAPK14Q16539 360 aa2.45□□□□□ -2.02
CHMP4A-208ENST00000534106 ZIK1Q3SY52 487 aaPredicted RBP2.45□□□□□ -2.02
CHMP4A-208ENST00000534106 RUNDC3AQ59EK9 446 aa2.45□□□□□ -2.02
CHMP4A-208ENST00000534106 TECRLQ5HYJ1 363 aa2.45□□□□□ -2.02
CHMP4A-208ENST00000534106 PDZK1Q5T2W1 519 aa2.45□□□□□ -2.02
CHMP4A-208ENST00000534106 CARD17Q5XLA6 110 aa2.45□□□□□ -2.02
CHMP4A-208ENST00000534106 FAM71E1Q6IPT2 247 aa2.45□□□□□ -2.02
CHMP4A-208ENST00000534106 NIPAL3Q6P499 406 aa2.45□□□□□ -2.02
CHMP4A-208ENST00000534106 TMEM154Q6P9G4 183 aa2.45□□□□□ -2.02
CHMP4A-208ENST00000534106 CCDC137Q6PK04 289 aaKnown RBP2.45□□□□□ -2.02
CHMP4A-208ENST00000534106 COLCA1Q6ZS62 124 aa2.45□□□□□ -2.02
CHMP4A-208ENST00000534106 C1orf122Q6ZSJ8 110 aa2.45□□□□□ -2.02
CHMP4A-208ENST00000534106 C9orf139Q6ZV77 190 aa2.45□□□□□ -2.02
CHMP4A-208ENST00000534106 RAPH1Q70E73 1250 aa2.45□□□□□ -2.02
CHMP4A-208ENST00000534106 KCTD20Q7Z5Y7 419 aa2.45□□□□□ -2.02
CHMP4A-208ENST00000534106 GPAT4Q86UL3 456 aa2.45□□□□□ -2.02
CHMP4A-208ENST00000534106 EPHX4Q8IUS5 362 aa2.45□□□□□ -2.02
CHMP4A-208ENST00000534106 LRRC34Q8IZ02 419 aa2.45□□□□□ -2.02
CHMP4A-208ENST00000534106 ZBED8Q8IZ13 594 aa2.45□□□□□ -2.02
CHMP4A-208ENST00000534106 CENPLQ8N0S6 344 aaPredicted RBP2.45□□□□□ -2.02
CHMP4A-208ENST00000534106 CLEC4FQ8N1N0 589 aa2.45□□□□□ -2.02
Retrieved 100 of 20,778 RNA–protein pairs in 82.4 ms