RNA–Protein interactions for RNA: ENST00000533946.5

SSBP3-215, Transcript of single stranded DNA binding protein 3, humanhuman

TSL 3

Gene SSBP3, Length 431 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP3-215ENST00000533946 CLPTM1LQ96KA5 538 aa8.23□□□□□ -1.09
SSBP3-215ENST00000533946 OR2H1Q9GZK4 316 aa8.23□□□□□ -1.09
SSBP3-215ENST00000533946 FN3KQ9H479 309 aa8.23□□□□□ -1.09
SSBP3-215ENST00000533946 SIAEQ9HAT2 523 aa8.23□□□□□ -1.09
SSBP3-215ENST00000533946 DYNLRB1Q9NP97 96 aa8.23□□□□□ -1.09
SSBP3-215ENST00000533946 TAAR3PQ9P1P4 343 aa8.23□□□□□ -1.09
SSBP3-215ENST00000533946 SIGLEC7Q9Y286 467 aa8.23□□□□□ -1.09
SSBP3-215ENST00000533946 IER3IP1Q9Y5U9 82 aa8.23□□□□□ -1.09
SSBP3-215ENST00000533946 C5orf49A4QMS7 147 aa8.22□□□□□ -1.09
SSBP3-215ENST00000533946 ZSCAN5BA6NJL1 495 aa8.22□□□□□ -1.09
SSBP3-215ENST00000533946 FAM157AC9JC47 383 aa8.22□□□□□ -1.09
SSBP3-215ENST00000533946 SOCS2O14508 198 aa8.22□□□□□ -1.09
SSBP3-215ENST00000533946 ARPC2O15144 300 aa8.22□□□□□ -1.09
SSBP3-215ENST00000533946 ATP8B1O43520 1251 aa8.22□□□□□ -1.09
SSBP3-215ENST00000533946 SYNGR3O43761 229 aa8.22□□□□□ -1.09
SSBP3-215ENST00000533946 RP2O75695 350 aa8.22□□□□□ -1.09
SSBP3-215ENST00000533946 PPP1R3DO95685 299 aa8.22□□□□□ -1.09
SSBP3-215ENST00000533946 IGF2P01344 180 aa8.22□□□□□ -1.09
SSBP3-215ENST00000533946 LCKP06239 509 aa8.22□□□□□ -1.09
SSBP3-215ENST00000533946 H1F0P07305 194 aaKnown RBP8.22□□□□□ -1.09
SSBP3-215ENST00000533946 SLC25A16P16260 332 aa8.22□□□□□ -1.09
SSBP3-215ENST00000533946 STOMP27105 288 aa8.22□□□□□ -1.09
SSBP3-215ENST00000533946 DAP3P51398 398 aaKnown RBP8.22□□□□□ -1.09
SSBP3-215ENST00000533946 UCP2P55851 309 aa8.22□□□□□ -1.09
SSBP3-215ENST00000533946 CCL8P80075 99 aa8.22□□□□□ -1.09
SSBP3-215ENST00000533946 MS4A2Q01362 244 aa8.22□□□□□ -1.09
SSBP3-215ENST00000533946 TSTQ16762 297 aaKnown RBP8.22□□□□□ -1.09
SSBP3-215ENST00000533946 RSPO1Q2MKA7 263 aaPredicted RBP8.22□□□□□ -1.09
SSBP3-215ENST00000533946 ZBED5Q49AG3 693 aa8.22□□□□□ -1.09
SSBP3-215ENST00000533946 AVPI1Q5T686 147 aa8.22□□□□□ -1.09
SSBP3-215ENST00000533946 LYPD4Q6UWN0 246 aa8.22□□□□□ -1.09
SSBP3-215ENST00000533946 ARPINQ7Z6K5 226 aa8.22□□□□□ -1.09
SSBP3-215ENST00000533946 CCDC36Q8IYA8 594 aa8.22□□□□□ -1.09
SSBP3-215ENST00000533946 DEFB107AQ8IZN7 70 aa8.22□□□□□ -1.09
SSBP3-215ENST00000533946 SLC25A40Q8TBP6 338 aa8.22□□□□□ -1.09
SSBP3-215ENST00000533946 UBASH3BQ8TF42 649 aa8.22□□□□□ -1.09
SSBP3-215ENST00000533946 IPCEF1Q8WWN9 437 aaPredicted RBP8.22□□□□□ -1.09
SSBP3-215ENST00000533946 LZICQ8WZA0 190 aa8.22□□□□□ -1.09
SSBP3-215ENST00000533946 C1orf159Q96HA4 380 aa8.22□□□□□ -1.09
SSBP3-215ENST00000533946 RSRC1Q96IZ7 334 aaKnown RBP8.22□□□□□ -1.09
SSBP3-215ENST00000533946 DHRS1Q96LJ7 313 aa8.22□□□□□ -1.09
SSBP3-215ENST00000533946 OR2J1Q9GZK6 312 aa8.22□□□□□ -1.09
SSBP3-215ENST00000533946 POLR2J2Q9GZM3 115 aaKnown RBP8.22□□□□□ -1.09
SSBP3-215ENST00000533946 POLR2J3Q9H1A7 115 aaKnown RBP8.22□□□□□ -1.09
SSBP3-215ENST00000533946 SYT4Q9H2B2 425 aa8.22□□□□□ -1.09
SSBP3-215ENST00000533946 RERGLQ9H628 205 aa8.22□□□□□ -1.09
SSBP3-215ENST00000533946 DENND2DQ9H6A0 471 aaPredicted RBP8.22□□□□□ -1.09
SSBP3-215ENST00000533946 LPAR2Q9HBW0 351 aa8.22□□□□□ -1.09
SSBP3-215ENST00000533946 SPAG4Q9NPE6 437 aa8.22□□□□□ -1.09
SSBP3-215ENST00000533946 POLE4Q9NR33 117 aa8.22□□□□□ -1.09
SSBP3-215ENST00000533946 COA3Q9Y2R0 106 aaPredicted RBP8.22□□□□□ -1.09
SSBP3-215ENST00000533946 IGLV3-9A0A075B6K5 115 aa8.21□□□□□ -1.1
SSBP3-215ENST00000533946 LOC100289279A0A1B0GTE1 492 aa8.21□□□□□ -1.1
SSBP3-215ENST00000533946 LOC390937A0A1W2PQ73 354 aa8.21□□□□□ -1.1
SSBP3-215ENST00000533946 TCRBV5S2A0A599 114 aa8.21□□□□□ -1.1
SSBP3-215ENST00000533946 M0R233 179 aa8.21□□□□□ -1.1
SSBP3-215ENST00000533946 TP53P04637 393 aaPredicted RBP8.21□□□□□ -1.1
SSBP3-215ENST00000533946 CD14P08571 375 aa8.21□□□□□ -1.1
SSBP3-215ENST00000533946 APEHP13798 732 aaKnown RBP8.21□□□□□ -1.1
SSBP3-215ENST00000533946 HSD17B1P14061 328 aa8.21□□□□□ -1.1
SSBP3-215ENST00000533946 ZNF250P15622 560 aa8.21□□□□□ -1.1
SSBP3-215ENST00000533946 ZNF23P17027 643 aa8.21□□□□□ -1.1
SSBP3-215ENST00000533946 GIFP27352 417 aa8.21□□□□□ -1.1
SSBP3-215ENST00000533946 PRDX6P30041 224 aa8.21□□□□□ -1.1
SSBP3-215ENST00000533946 RPL4P36578 427 aaKnown RBP8.21□□□□□ -1.1
SSBP3-215ENST00000533946 ZNF84P51523 738 aa8.21□□□□□ -1.1
SSBP3-215ENST00000533946 DSCR9P59020 149 aa8.21□□□□□ -1.1
SSBP3-215ENST00000533946 CCDC92Q53HC0 331 aaPredicted RBP8.21□□□□□ -1.1
SSBP3-215ENST00000533946 FAM27BQ5VT28 67 aa8.21□□□□□ -1.1
SSBP3-215ENST00000533946 CYB5R2Q6BCY4 276 aa8.21□□□□□ -1.1
SSBP3-215ENST00000533946 RGS7BPQ6MZT1 257 aaPredicted RBP8.21□□□□□ -1.1
SSBP3-215ENST00000533946 TMEM53Q6P2H8 277 aa8.21□□□□□ -1.1
SSBP3-215ENST00000533946 CORO6Q6QEF8 472 aa8.21□□□□□ -1.1
SSBP3-215ENST00000533946 Q6ZR03 302 aa8.21□□□□□ -1.1
SSBP3-215ENST00000533946 NAA40Q86UY6 237 aa8.21□□□□□ -1.1
SSBP3-215ENST00000533946 ZNF786Q8N393 782 aa8.21□□□□□ -1.1
SSBP3-215ENST00000533946 IL17RDQ8NFM7 739 aa8.21□□□□□ -1.1
SSBP3-215ENST00000533946 OR8D4Q8NGM9 314 aa8.21□□□□□ -1.1
SSBP3-215ENST00000533946 OR1J1Q8NGS3 322 aa8.21□□□□□ -1.1
SSBP3-215ENST00000533946 CMTM5Q96DZ9 223 aa8.21□□□□□ -1.1
SSBP3-215ENST00000533946 MARS2Q96GW9 593 aaKnown RBP8.21□□□□□ -1.1
SSBP3-215ENST00000533946 PYURFQ96I23 114 aa8.21□□□□□ -1.1
SSBP3-215ENST00000533946 SAMD8Q96LT4 415 aa8.21□□□□□ -1.1
SSBP3-215ENST00000533946 CCT8L2Q96SF2 557 aa8.21□□□□□ -1.1
SSBP3-215ENST00000533946 PIMREGQ9BSJ6 248 aa8.21□□□□□ -1.1
SSBP3-215ENST00000533946 ALG12Q9BV10 488 aa8.21□□□□□ -1.1
SSBP3-215ENST00000533946 PLA2G12AQ9BZM1 189 aa8.21□□□□□ -1.1
SSBP3-215ENST00000533946 NUAK2Q9H093 628 aa8.21□□□□□ -1.1
SSBP3-215ENST00000533946 RAB1BQ9H0U4 201 aa8.21□□□□□ -1.1
SSBP3-215ENST00000533946 CDH20Q9HBT6 801 aa8.21□□□□□ -1.1
SSBP3-215ENST00000533946 ZNF275Q9NSD4 429 aaPredicted RBP8.21□□□□□ -1.1
SSBP3-215ENST00000533946 FBN3Q75N90 2809 aa8.21□□□□□ -1.1
SSBP3-215ENST00000533946 IGHV3-64DA0A0J9YX35 117 aa8.2□□□□□ -1.1
SSBP3-215ENST00000533946 A0A1W2PPW3 197 aa8.2□□□□□ -1.1
SSBP3-215ENST00000533946 A0A1W2PRQ8 180 aa8.2□□□□□ -1.1
SSBP3-215ENST00000533946 PRSS37A4D1T9 235 aa8.2□□□□□ -1.1
SSBP3-215ENST00000533946 UNC119BA6NIH7 251 aa8.2□□□□□ -1.1
SSBP3-215ENST00000533946 NPIPB13A6NJU9 1138 aa8.2□□□□□ -1.1
SSBP3-215ENST00000533946 NPIPB4C9JG80 1138 aa8.2□□□□□ -1.1
SSBP3-215ENST00000533946 TLX2O43763 284 aaPredicted RBP8.2□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 52.7 ms