RNA–Protein interactions for RNA: ENST00000533242.1

NEDD8-207, Transcript of neural precursor cell expressed, developmentally down-regulated 8, humanhuman

TSL 1 (best)

Gene NEDD8, Length 2,300 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD8-207ENST00000533242 ANGPTL4Q9BY76 406 aa7.33□□□□□ -1.24
NEDD8-207ENST00000533242 PRRG3Q9BZD7 231 aa7.33□□□□□ -1.24
NEDD8-207ENST00000533242 WWTR1Q9GZV5 400 aa7.33□□□□□ -1.24
NEDD8-207ENST00000533242 CMC2Q9NRP2 79 aa7.33□□□□□ -1.24
NEDD8-207ENST00000533242 NDRG3Q9UGV2 375 aa7.33□□□□□ -1.24
NEDD8-207ENST00000533242 BOLA1Q9Y3E2 137 aa7.33□□□□□ -1.24
NEDD8-207ENST00000533242 GRIP1Q9Y3R0 1128 aa7.33□□□□□ -1.24
NEDD8-207ENST00000533242 N6AMT1Q9Y5N5 214 aa7.33□□□□□ -1.24
NEDD8-207ENST00000533242 RCBTB2O95199 551 aa7.32□□□□□ -1.24
NEDD8-207ENST00000533242 ACTL6AO96019 429 aa7.32□□□□□ -1.24
NEDD8-207ENST00000533242 HMGN1P05114 100 aa7.32□□□□□ -1.24
NEDD8-207ENST00000533242 OR12D2P58182 307 aa7.32□□□□□ -1.24
NEDD8-207ENST00000533242 ZNF85Q03923 595 aa7.32□□□□□ -1.24
NEDD8-207ENST00000533242 ACKR1Q16570 336 aa7.32□□□□□ -1.24
NEDD8-207ENST00000533242 RSBN1Q5VWQ0 802 aaPredicted RBP7.32□□□□□ -1.24
NEDD8-207ENST00000533242 LYPD4Q6UWN0 246 aa7.32□□□□□ -1.24
NEDD8-207ENST00000533242 SYT9Q86SS6 491 aa7.32□□□□□ -1.24
NEDD8-207ENST00000533242 TOR1AIP2Q8NFQ8 470 aa7.32□□□□□ -1.24
NEDD8-207ENST00000533242 ZNF524Q96C55 264 aa7.32□□□□□ -1.24
NEDD8-207ENST00000533242 RBM18Q96H35 190 aaKnown RBP7.32□□□□□ -1.24
NEDD8-207ENST00000533242 TMEM41AQ96HV5 264 aa7.32□□□□□ -1.24
NEDD8-207ENST00000533242 UCN2Q96RP3 112 aa7.32□□□□□ -1.24
NEDD8-207ENST00000533242 GAL3ST4Q96RP7 486 aa7.32□□□□□ -1.24
NEDD8-207ENST00000533242 CCL19Q99731 98 aa7.32□□□□□ -1.24
NEDD8-207ENST00000533242 ZNF426Q9BUY5 554 aa7.32□□□□□ -1.24
NEDD8-207ENST00000533242 JAM3Q9BX67 310 aa7.32□□□□□ -1.24
NEDD8-207ENST00000533242 FN3KQ9H479 309 aa7.32□□□□□ -1.24
NEDD8-207ENST00000533242 ADGRL4Q9HBW9 690 aa7.32□□□□□ -1.24
NEDD8-207ENST00000533242 NEK6Q9HC98 313 aa7.32□□□□□ -1.24
NEDD8-207ENST00000533242 GSTK1Q9Y2Q3 226 aa7.32□□□□□ -1.24
NEDD8-207ENST00000533242 MAP1AP78559 2803 aaPredicted RBP7.32□□□□□ -1.24
NEDD8-207ENST00000533242 LANCL1O43813 399 aa7.32□□□□□ -1.24
NEDD8-207ENST00000533242 CRLF1O75462 422 aa7.32□□□□□ -1.24
NEDD8-207ENST00000533242 TFP02787 698 aa7.32□□□□□ -1.24
NEDD8-207ENST00000533242 HLA-DPB1P04440 258 aa7.32□□□□□ -1.24
NEDD8-207ENST00000533242 FAM157BP0CG42 384 aa7.32□□□□□ -1.24
NEDD8-207ENST00000533242 GALNSP34059 522 aa7.32□□□□□ -1.24
NEDD8-207ENST00000533242 THBS2P35442 1172 aa7.32□□□□□ -1.24
NEDD8-207ENST00000533242 EVX1P49640 407 aa7.32□□□□□ -1.24
NEDD8-207ENST00000533242 RPS7P62081 194 aaKnown RBP7.32□□□□□ -1.24
NEDD8-207ENST00000533242 SCN1BQ07699 218 aa7.32□□□□□ -1.24
NEDD8-207ENST00000533242 FOXF2Q12947 444 aa7.32□□□□□ -1.24
NEDD8-207ENST00000533242 EBPQ15125 230 aaKnown RBP7.32□□□□□ -1.24
NEDD8-207ENST00000533242 TMEM53Q6P2H8 277 aa7.32□□□□□ -1.24
NEDD8-207ENST00000533242 ARL9Q6T311 187 aa7.32□□□□□ -1.24
NEDD8-207ENST00000533242 C20orf204Q6ZNR8 217 aa7.32□□□□□ -1.24
NEDD8-207ENST00000533242 ZNF441Q8N8Z8 693 aa7.32□□□□□ -1.24
NEDD8-207ENST00000533242 OR52L1Q8NGH7 329 aa7.32□□□□□ -1.24
NEDD8-207ENST00000533242 OR5J2Q8NH18 312 aa7.32□□□□□ -1.24
NEDD8-207ENST00000533242 OR4C3Q8NH37 302 aa7.32□□□□□ -1.24
NEDD8-207ENST00000533242 ZNF486Q96H40 463 aaPredicted RBP7.32□□□□□ -1.24
NEDD8-207ENST00000533242 C4orf36Q96KX1 117 aa7.32□□□□□ -1.24
NEDD8-207ENST00000533242 VSTM2LQ96N03 204 aa7.32□□□□□ -1.24
NEDD8-207ENST00000533242 FYTTD1Q96QD9 318 aaKnown RBP7.32□□□□□ -1.24
NEDD8-207ENST00000533242 FOLH1BQ9HBA9 442 aa7.32□□□□□ -1.24
NEDD8-207ENST00000533242 BABAM2Q9NXR7 383 aa7.32□□□□□ -1.24
NEDD8-207ENST00000533242 H2AFY2Q9P0M6 372 aaPredicted RBP7.32□□□□□ -1.24
NEDD8-207ENST00000533242 ERVK-19Q9WJR5 959 aa7.32□□□□□ -1.24
NEDD8-207ENST00000533242 MED31Q9Y3C7 131 aa7.32□□□□□ -1.24
NEDD8-207ENST00000533242 ADAM18Q9Y3Q7 739 aa7.32□□□□□ -1.24
NEDD8-207ENST00000533242 NPFFR2Q9Y5X5 522 aa7.32□□□□□ -1.24
NEDD8-207ENST00000533242 MED12LQ86YW9 2145 aa7.31□□□□□ -1.24
NEDD8-207ENST00000533242 DSCAMO60469 2012 aa7.31□□□□□ -1.24
NEDD8-207ENST00000533242 A0A0G2JMP0 313 aa7.31□□□□□ -1.24
NEDD8-207ENST00000533242 A0A0X1KG70 313 aa7.31□□□□□ -1.24
NEDD8-207ENST00000533242 DAPL1A0PJW8 107 aa7.31□□□□□ -1.24
NEDD8-207ENST00000533242 CHP2O43745 196 aa7.31□□□□□ -1.24
NEDD8-207ENST00000533242 OR10H2O60403 315 aa7.31□□□□□ -1.24
NEDD8-207ENST00000533242 PAHP00439 452 aa7.31□□□□□ -1.24
NEDD8-207ENST00000533242 SBK2P0C263 348 aa7.31□□□□□ -1.24
NEDD8-207ENST00000533242 SLC35E2P0CK97 266 aa7.31□□□□□ -1.24
NEDD8-207ENST00000533242 CT45A8P0DMV1 189 aa7.31□□□□□ -1.24
NEDD8-207ENST00000533242 CT45A9P0DMV2 189 aa7.31□□□□□ -1.24
NEDD8-207ENST00000533242 CPN1P15169 458 aa7.31□□□□□ -1.24
NEDD8-207ENST00000533242 ELK1P19419 428 aa7.31□□□□□ -1.24
NEDD8-207ENST00000533242 PAICSP22234 425 aaKnown RBP7.31□□□□□ -1.24
NEDD8-207ENST00000533242 ACVR1BP36896 505 aa7.31□□□□□ -1.24
NEDD8-207ENST00000533242 SLC37A1P57057 533 aa7.31□□□□□ -1.24
NEDD8-207ENST00000533242 SLC3A1Q07837 685 aa7.31□□□□□ -1.24
NEDD8-207ENST00000533242 KRR1Q13601 381 aaKnown RBP7.31□□□□□ -1.24
NEDD8-207ENST00000533242 GALEQ14376 348 aa7.31□□□□□ -1.24
NEDD8-207ENST00000533242 ZNF267Q14586 743 aaPredicted RBP7.31□□□□□ -1.24
NEDD8-207ENST00000533242 BCL2A1Q16548 175 aa7.31□□□□□ -1.24
NEDD8-207ENST00000533242 CT45A2Q5DJT8 189 aa7.31□□□□□ -1.24
NEDD8-207ENST00000533242 ALG10BQ5I7T1 473 aa7.31□□□□□ -1.24
NEDD8-207ENST00000533242 WIPI1Q5MNZ9 446 aaPredicted RBP7.31□□□□□ -1.24
NEDD8-207ENST00000533242 FNDC7Q5VTL7 733 aa7.31□□□□□ -1.24
NEDD8-207ENST00000533242 LUZP2Q86TE4 346 aa7.31□□□□□ -1.24
NEDD8-207ENST00000533242 GID4Q8IVV7 300 aa7.31□□□□□ -1.24
NEDD8-207ENST00000533242 RNF113BQ8IZP6 322 aaKnown RBP7.31□□□□□ -1.24
NEDD8-207ENST00000533242 Q8N402 240 aa7.31□□□□□ -1.24
NEDD8-207ENST00000533242 GDPD1Q8N9F7 314 aa7.31□□□□□ -1.24
NEDD8-207ENST00000533242 SDR9C7Q8NEX9 313 aa7.31□□□□□ -1.24
NEDD8-207ENST00000533242 OR4M2Q8NGB6 313 aa7.31□□□□□ -1.24
NEDD8-207ENST00000533242 CAPSLQ8WWF8 208 aa7.31□□□□□ -1.24
NEDD8-207ENST00000533242 WNT2BQ93097 391 aa7.31□□□□□ -1.24
NEDD8-207ENST00000533242 PGLYRP3Q96LB9 341 aa7.31□□□□□ -1.24
NEDD8-207ENST00000533242 GSX2Q9BZM3 304 aa7.31□□□□□ -1.24
NEDD8-207ENST00000533242 CACYBPQ9HB71 228 aaKnown RBP7.31□□□□□ -1.24
NEDD8-207ENST00000533242 ASB6Q9NWX5 421 aa7.31□□□□□ -1.24
Retrieved 100 of 20,778 RNA–protein pairs in 37.1 ms