RNA–Protein interactions for RNA: ENST00000532935.5

CPSF1-210, Transcript of cleavage and polyadenylation specific factor 1, humanhuman

TSL 5

Gene CPSF1, Length 506 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF1-210ENST00000532935 ELF3P78545 371 aaPredicted RBP13.26□□□□□ -0.29
CPSF1-210ENST00000532935 PLP2Q04941 152 aa13.26□□□□□ -0.29
CPSF1-210ENST00000532935 FAM27BQ5VT28 67 aa13.26□□□□□ -0.29
CPSF1-210ENST00000532935 DPY19L2P2Q6ZN68 376 aa13.26□□□□□ -0.29
CPSF1-210ENST00000532935 SVOPLQ8N434 492 aa13.26□□□□□ -0.29
CPSF1-210ENST00000532935 FANK1Q8TC84 345 aa13.26□□□□□ -0.29
CPSF1-210ENST00000532935 POP5Q969H6 163 aaKnown RBP13.26□□□□□ -0.29
CPSF1-210ENST00000532935 SLC7A8Q9UHI5 535 aa13.26□□□□□ -0.29
CPSF1-210ENST00000532935 CMAHPQ9Y471 501 aa13.26□□□□□ -0.29
CPSF1-210ENST00000532935 IER3IP1Q9Y5U9 82 aa13.26□□□□□ -0.29
CPSF1-210ENST00000532935 CSPG4Q6UVK1 2322 aa13.25□□□□□ -0.29
CPSF1-210ENST00000532935 IQCMA0A1B0GVH7 501 aa13.25□□□□□ -0.29
CPSF1-210ENST00000532935 A0A1W2PPL8 197 aa13.25□□□□□ -0.29
CPSF1-210ENST00000532935 TMEM129A0AVI4 362 aa13.25□□□□□ -0.29
CPSF1-210ENST00000532935 RNF223E7ERA6 249 aa13.25□□□□□ -0.29
CPSF1-210ENST00000532935 TNFRSF11BO00300 401 aa13.25□□□□□ -0.29
CPSF1-210ENST00000532935 SOCS2O14508 198 aa13.25□□□□□ -0.29
CPSF1-210ENST00000532935 ACOT8O14734 319 aa13.25□□□□□ -0.29
CPSF1-210ENST00000532935 STAMBPO95630 424 aa13.25□□□□□ -0.29
CPSF1-210ENST00000532935 TXNDC12O95881 172 aa13.25□□□□□ -0.29
CPSF1-210ENST00000532935 CST2P09228 141 aa13.25□□□□□ -0.29
CPSF1-210ENST00000532935 CCL2P13500 99 aa13.25□□□□□ -0.29
CPSF1-210ENST00000532935 ZNF32P17041 273 aa13.25□□□□□ -0.29
CPSF1-210ENST00000532935 LAP3P28838 519 aa13.25□□□□□ -0.29
CPSF1-210ENST00000532935 PPOXP50336 477 aa13.25□□□□□ -0.29
CPSF1-210ENST00000532935 RPS6KA3P51812 740 aa13.25□□□□□ -0.29
CPSF1-210ENST00000532935 RPS23P62266 143 aaKnown RBP13.25□□□□□ -0.29
CPSF1-210ENST00000532935 HSF2Q03933 536 aa13.25□□□□□ -0.29
CPSF1-210ENST00000532935 MSMPQ1L6U9 139 aa13.25□□□□□ -0.29
CPSF1-210ENST00000532935 TBC1D28Q2M2D7 210 aa13.25□□□□□ -0.29
CPSF1-210ENST00000532935 RFX4Q33E94 735 aa13.25□□□□□ -0.29
CPSF1-210ENST00000532935 FAM98BQ52LJ0 330 aaKnown RBP13.25□□□□□ -0.29
CPSF1-210ENST00000532935 PABPC1L2AQ5JQF8 200 aa13.25□□□□□ -0.29
CPSF1-210ENST00000532935 C1orf94Q6P1W5 598 aa13.25□□□□□ -0.29
CPSF1-210ENST00000532935 PGBD2Q6P3X8 592 aa13.25□□□□□ -0.29
CPSF1-210ENST00000532935 CLEC2AQ6UVW9 174 aa13.25□□□□□ -0.29
CPSF1-210ENST00000532935 CLEC9AQ6UXN8 241 aa13.25□□□□□ -0.29
CPSF1-210ENST00000532935 ADCK1Q86TW2 530 aa13.25□□□□□ -0.29
CPSF1-210ENST00000532935 PAQR4Q8N4S7 273 aaPredicted RBP13.25□□□□□ -0.29
CPSF1-210ENST00000532935 OR1J2Q8NGS2 313 aa13.25□□□□□ -0.29
CPSF1-210ENST00000532935 GNPDA2Q8TDQ7 276 aa13.25□□□□□ -0.29
CPSF1-210ENST00000532935 UTP4Q969X6 686 aaKnown RBP13.25□□□□□ -0.29
CPSF1-210ENST00000532935 MRPL24Q96A35 216 aaKnown RBP13.25□□□□□ -0.29
CPSF1-210ENST00000532935 LRGUKQ96M69 825 aa13.25□□□□□ -0.29
CPSF1-210ENST00000532935 SORCS2Q96PQ0 1159 aa13.25□□□□□ -0.29
CPSF1-210ENST00000532935 DOK1Q99704 481 aa13.25□□□□□ -0.29
CPSF1-210ENST00000532935 VRK1Q99986 396 aaPredicted RBP13.25□□□□□ -0.29
CPSF1-210ENST00000532935 RHNO1Q9BSD3 238 aa13.25□□□□□ -0.29
CPSF1-210ENST00000532935 OR52D1Q9H346 318 aa13.25□□□□□ -0.29
CPSF1-210ENST00000532935 CDH20Q9HBT6 801 aa13.25□□□□□ -0.29
CPSF1-210ENST00000532935 FBXO9Q9UK97 447 aaPredicted RBP13.25□□□□□ -0.29
CPSF1-210ENST00000532935 LY6HO94772 140 aa13.24□□□□□ -0.29
CPSF1-210ENST00000532935 PPP1R3DO95685 299 aa13.24□□□□□ -0.29
CPSF1-210ENST00000532935 SNAP29O95721 258 aa13.24□□□□□ -0.29
CPSF1-210ENST00000532935 LY6G6DO95868 133 aa13.24□□□□□ -0.29
CPSF1-210ENST00000532935 F12P00748 615 aaPredicted RBP13.24□□□□□ -0.29
CPSF1-210ENST00000532935 APEHP13798 732 aaKnown RBP13.24□□□□□ -0.29
CPSF1-210ENST00000532935 CTLA4P16410 223 aa13.24□□□□□ -0.29
CPSF1-210ENST00000532935 MSR1P21757 451 aa13.24□□□□□ -0.29
CPSF1-210ENST00000532935 APEX1P27695 318 aaKnown RBP13.24□□□□□ -0.29
CPSF1-210ENST00000532935 SLC6A6P31641 620 aa13.24□□□□□ -0.29
CPSF1-210ENST00000532935 RIPPLY3P57055 190 aa13.24□□□□□ -0.29
CPSF1-210ENST00000532935 DSCR9P59020 149 aa13.24□□□□□ -0.29
CPSF1-210ENST00000532935 PSG4Q00888 419 aa13.24□□□□□ -0.29
CPSF1-210ENST00000532935 TRAP1Q12931 704 aaKnown RBP13.24□□□□□ -0.29
CPSF1-210ENST00000532935 TSPAN31Q12999 210 aa13.24□□□□□ -0.29
CPSF1-210ENST00000532935 PTCHD4Q6ZW05 846 aa13.24□□□□□ -0.29
CPSF1-210ENST00000532935 LINC00471Q8N535 108 aa13.24□□□□□ -0.29
CPSF1-210ENST00000532935 ZNF525Q8N782 197 aa13.24□□□□□ -0.29
CPSF1-210ENST00000532935 CPEB3Q8NE35 698 aaKnown RBP13.24□□□□□ -0.29
CPSF1-210ENST00000532935 OR10H5Q8NGA6 315 aa13.24□□□□□ -0.29
CPSF1-210ENST00000532935 OR4C15Q8NGM1 316 aa13.24□□□□□ -0.29
CPSF1-210ENST00000532935 ZNF416Q9BWM5 594 aa13.24□□□□□ -0.29
CPSF1-210ENST00000532935 REG4Q9BYZ8 158 aa13.24□□□□□ -0.29
CPSF1-210ENST00000532935 MRPL37Q9BZE1 423 aaKnown RBP13.24□□□□□ -0.29
CPSF1-210ENST00000532935 TRIM15Q9C019 465 aa13.24□□□□□ -0.29
CPSF1-210ENST00000532935 SYT4Q9H2B2 425 aa13.24□□□□□ -0.29
CPSF1-210ENST00000532935 POLE4Q9NR33 117 aa13.24□□□□□ -0.29
CPSF1-210ENST00000532935 VSX1Q9NZR4 365 aaPredicted RBP13.24□□□□□ -0.29
CPSF1-210ENST00000532935 FKBP7Q9Y680 259 aa13.24□□□□□ -0.29
CPSF1-210ENST00000532935 IGHV4-30-2A0A087WSY4 118 aa13.23□□□□□ -0.29
CPSF1-210ENST00000532935 IMPA2O14732 288 aa13.23□□□□□ -0.29
CPSF1-210ENST00000532935 SLC16A7O60669 478 aa13.23□□□□□ -0.29
CPSF1-210ENST00000532935 SCG5P05408 212 aa13.23□□□□□ -0.29
CPSF1-210ENST00000532935 HEXAP06865 529 aa13.23□□□□□ -0.29
CPSF1-210ENST00000532935 FAM157BP0CG42 384 aa13.23□□□□□ -0.29
CPSF1-210ENST00000532935 STOMP27105 288 aa13.23□□□□□ -0.29
CPSF1-210ENST00000532935 APLNRP35414 380 aa13.23□□□□□ -0.29
CPSF1-210ENST00000532935 CDKN2AP42771 156 aaKnown RBP13.23□□□□□ -0.29
CPSF1-210ENST00000532935 EVX1P49640 407 aa13.23□□□□□ -0.29
CPSF1-210ENST00000532935 PCBD1P61457 104 aa13.23□□□□□ -0.29
CPSF1-210ENST00000532935 ENDOGQ14249 297 aaKnown RBP13.23□□□□□ -0.29
CPSF1-210ENST00000532935 OR2T5Q6IEZ7 315 aa13.23□□□□□ -0.29
CPSF1-210ENST00000532935 PGM2L1Q6PCE3 622 aa13.23□□□□□ -0.29
CPSF1-210ENST00000532935 ZNF620Q6ZNG0 422 aa13.23□□□□□ -0.29
CPSF1-210ENST00000532935 Q71RC1 249 aaPredicted RBP13.23□□□□□ -0.29
CPSF1-210ENST00000532935 C10orf67Q8IYJ2 551 aa13.23□□□□□ -0.29
CPSF1-210ENST00000532935 MAPK1IP1LQ8NDC0 245 aa13.23□□□□□ -0.29
CPSF1-210ENST00000532935 OR9Q2Q8NGE9 314 aa13.23□□□□□ -0.29
CPSF1-210ENST00000532935 OR2T29Q8NH02 315 aa13.23□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 35 ms