RNA–Protein interactions for RNA: ENST00000532259.1

SRPRA-206, Transcript of SRP receptor subunit alpha, humanhuman

TSL 2 BASIC

Gene SRPRA, Length 2,453 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRPRA-206ENST00000532259 KRT74Q7RTS7 529 aa13.56□□□□□ -0.24
SRPRA-206ENST00000532259 ENKURQ8TC29 256 aa13.56□□□□□ -0.24
SRPRA-206ENST00000532259 KIAA1143Q96AT1 154 aaPredicted RBP13.56□□□□□ -0.24
SRPRA-206ENST00000532259 KCTD12Q96CX2 325 aaKnown RBP13.56□□□□□ -0.24
SRPRA-206ENST00000532259 DCBLD2Q96PD2 775 aa13.56□□□□□ -0.24
SRPRA-206ENST00000532259 LIN7BQ9HAP6 207 aa13.56□□□□□ -0.24
SRPRA-206ENST00000532259 EMC9Q9Y3B6 208 aa13.56□□□□□ -0.24
SRPRA-206ENST00000532259 RIF1Q5UIP0 2472 aaKnown RBP13.56□□□□□ -0.24
SRPRA-206ENST00000532259 FAM186AA6NE01 2351 aa13.56□□□□□ -0.24
SRPRA-206ENST00000532259 LOC101059948A0A1B0GTJ6 334 aa13.56□□□□□ -0.24
SRPRA-206ENST00000532259 ZIC3O60481 467 aa13.56□□□□□ -0.24
SRPRA-206ENST00000532259 MT-CO3P00414 261 aa13.56□□□□□ -0.24
SRPRA-206ENST00000532259 RAB25P57735 213 aa13.56□□□□□ -0.24
SRPRA-206ENST00000532259 OC90Q02509 493 aaPredicted RBP13.56□□□□□ -0.24
SRPRA-206ENST00000532259 FCRLAQ7L513 359 aa13.56□□□□□ -0.24
SRPRA-206ENST00000532259 YRDCQ86U90 279 aaKnown RBP13.56□□□□□ -0.24
SRPRA-206ENST00000532259 EMC7Q9NPA0 242 aa13.56□□□□□ -0.24
SRPRA-206ENST00000532259 FRYQ5TBA9 3013 aa13.56□□□□□ -0.24
SRPRA-206ENST00000532259 OR2M5A3KFT3 312 aa13.55□□□□□ -0.24
SRPRA-206ENST00000532259 SLC43A1O75387 559 aa13.55□□□□□ -0.24
SRPRA-206ENST00000532259 CD3GP09693 182 aa13.55□□□□□ -0.24
SRPRA-206ENST00000532259 ZNF806P0C7X5 589 aa13.55□□□□□ -0.24
SRPRA-206ENST00000532259 LIFP15018 202 aa13.55□□□□□ -0.24
SRPRA-206ENST00000532259 RPS15P62841 145 aaKnown RBP13.55□□□□□ -0.24
SRPRA-206ENST00000532259 SELENBP1Q13228 472 aa13.55□□□□□ -0.24
SRPRA-206ENST00000532259 HES3Q5TGS1 186 aa13.55□□□□□ -0.24
SRPRA-206ENST00000532259 CDCP2Q5VXM1 449 aa13.55□□□□□ -0.24
SRPRA-206ENST00000532259 TMPRSS12Q86WS5 348 aa13.55□□□□□ -0.24
SRPRA-206ENST00000532259 OR6S1Q8NH40 331 aa13.55□□□□□ -0.24
SRPRA-206ENST00000532259 OR52N5Q8NH56 324 aa13.55□□□□□ -0.24
SRPRA-206ENST00000532259 C11orf40Q8WZ69 217 aa13.55□□□□□ -0.24
SRPRA-206ENST00000532259 UCN2Q96RP3 112 aa13.55□□□□□ -0.24
SRPRA-206ENST00000532259 THAP7Q9BT49 309 aaPredicted RBP13.55□□□□□ -0.24
SRPRA-206ENST00000532259 NLKQ9UBE8 527 aa13.55□□□□□ -0.24
SRPRA-206ENST00000532259 IFITM5A6NNB3 132 aa13.55□□□□□ -0.24
SRPRA-206ENST00000532259 CD1AP06126 327 aa13.55□□□□□ -0.24
SRPRA-206ENST00000532259 RFPL3SP0C7P2 107 aa13.55□□□□□ -0.24
SRPRA-206ENST00000532259 PTHLHP12272 177 aa13.55□□□□□ -0.24
SRPRA-206ENST00000532259 ZNF43P17038 809 aa13.55□□□□□ -0.24
SRPRA-206ENST00000532259 DLSTP36957 453 aa13.55□□□□□ -0.24
SRPRA-206ENST00000532259 CD97P48960 835 aa13.55□□□□□ -0.24
SRPRA-206ENST00000532259 RIDAP52758 137 aaKnown RBP13.55□□□□□ -0.24
SRPRA-206ENST00000532259 NKX2-5P52952 324 aaPredicted RBP13.55□□□□□ -0.24
SRPRA-206ENST00000532259 KCTD18Q6PI47 426 aaPredicted RBP13.55□□□□□ -0.24
SRPRA-206ENST00000532259 METAP1DQ6UB28 335 aaPredicted RBP13.55□□□□□ -0.24
SRPRA-206ENST00000532259 ZNF227Q86WZ6 799 aa13.55□□□□□ -0.24
SRPRA-206ENST00000532259 UBQLNLQ8IYU4 475 aa13.55□□□□□ -0.24
SRPRA-206ENST00000532259 GPR148Q8TDV2 347 aa13.55□□□□□ -0.24
SRPRA-206ENST00000532259 TMEM9BQ9NQ34 198 aa13.55□□□□□ -0.24
SRPRA-206ENST00000532259 V9GY05 133 aa13.55□□□□□ -0.24
SRPRA-206ENST00000532259 TMEM212A6NML5 194 aa13.54□□□□□ -0.24
SRPRA-206ENST00000532259 PHYHO14832 338 aa13.54□□□□□ -0.24
SRPRA-206ENST00000532259 TRAF3IP2O43734 574 aaPredicted RBP13.54□□□□□ -0.24
SRPRA-206ENST00000532259 RFC3P40938 356 aa13.54□□□□□ -0.24
SRPRA-206ENST00000532259 MAP2K3P46734 347 aa13.54□□□□□ -0.24
SRPRA-206ENST00000532259 PLA2G7Q13093 441 aa13.54□□□□□ -0.24
SRPRA-206ENST00000532259 SSPNQ14714 243 aa13.54□□□□□ -0.24
SRPRA-206ENST00000532259 AKAP14Q86UN6 197 aa13.54□□□□□ -0.24
SRPRA-206ENST00000532259 RAB43Q86YS6 212 aa13.54□□□□□ -0.24
SRPRA-206ENST00000532259 RNF128Q8TEB7 428 aa13.54□□□□□ -0.24
SRPRA-206ENST00000532259 PSMF1Q92530 271 aa13.54□□□□□ -0.24
SRPRA-206ENST00000532259 RBP7Q96R05 134 aa13.54□□□□□ -0.24
SRPRA-206ENST00000532259 MNTQ99583 582 aa13.54□□□□□ -0.24
SRPRA-206ENST00000532259 KCNK15Q9H427 330 aa13.54□□□□□ -0.24
SRPRA-206ENST00000532259 POU2F3Q9UKI9 436 aa13.54□□□□□ -0.24
SRPRA-206ENST00000532259 ZFHX2Q9C0A1 2572 aaPredicted RBP13.54□□□□□ -0.24
SRPRA-206ENST00000532259 TNFSF11O14788 317 aa13.54□□□□□ -0.24
SRPRA-206ENST00000532259 SEC14L5O43304 696 aa13.54□□□□□ -0.24
SRPRA-206ENST00000532259 LYRM1O43325 122 aa13.54□□□□□ -0.24
SRPRA-206ENST00000532259 KHDRBS3O75525 346 aaKnown RBP13.54□□□□□ -0.24
SRPRA-206ENST00000532259 RBMS1P29558 406 aaKnown RBP13.54□□□□□ -0.24
SRPRA-206ENST00000532259 PTGS2P35354 604 aa13.54□□□□□ -0.24
SRPRA-206ENST00000532259 EIF1P41567 113 aaKnown RBP13.54□□□□□ -0.24
SRPRA-206ENST00000532259 DGCR2P98153 550 aa13.54□□□□□ -0.24
SRPRA-206ENST00000532259 ACER2Q5QJU3 275 aa13.54□□□□□ -0.24
SRPRA-206ENST00000532259 TIGD3Q6B0B8 471 aa13.54□□□□□ -0.24
SRPRA-206ENST00000532259 DNM1P34Q6PK57 102 aa13.54□□□□□ -0.24
SRPRA-206ENST00000532259 CMTM4Q8IZR5 234 aa13.54□□□□□ -0.24
SRPRA-206ENST00000532259 BEST3Q8N1M1 668 aa13.54□□□□□ -0.24
SRPRA-206ENST00000532259 UBASH3BQ8TF42 649 aa13.54□□□□□ -0.24
SRPRA-206ENST00000532259 ASB17Q8WXJ9 295 aa13.54□□□□□ -0.24
SRPRA-206ENST00000532259 LIN37Q96GY3 246 aaPredicted RBP13.54□□□□□ -0.24
SRPRA-206ENST00000532259 SNX18Q96RF0 628 aa13.54□□□□□ -0.24
SRPRA-206ENST00000532259 DDA1Q9BW61 102 aa13.54□□□□□ -0.24
SRPRA-206ENST00000532259 DEPPQ9NTK1 212 aa13.54□□□□□ -0.24
SRPRA-206ENST00000532259 IL17BQ9UHF5 180 aa13.54□□□□□ -0.24
SRPRA-206ENST00000532259 POLR1DQ9Y2S0 133 aa13.54□□□□□ -0.24
SRPRA-206ENST00000532259 SPENQ96T58 3664 aaKnown RBP13.53□□□□□ -0.24
SRPRA-206ENST00000532259 TRBV5-5A0A0J9YX44 114 aa13.53□□□□□ -0.24
SRPRA-206ENST00000532259 A0A1W2PQ72 361 aa13.53□□□□□ -0.24
SRPRA-206ENST00000532259 ANXA2P2A6NMY6 339 aa13.53□□□□□ -0.24
SRPRA-206ENST00000532259 LMX1BO60663 402 aa13.53□□□□□ -0.24
SRPRA-206ENST00000532259 ANXA2P07355 339 aaKnown RBP13.53□□□□□ -0.24
SRPRA-206ENST00000532259 BLVRAP53004 296 aa13.53□□□□□ -0.24
SRPRA-206ENST00000532259 CLDN17P56750 224 aa13.53□□□□□ -0.24
SRPRA-206ENST00000532259 RASGEF1BQ0VAM2 473 aa13.53□□□□□ -0.24
SRPRA-206ENST00000532259 RSBN1Q5VWQ0 802 aaPredicted RBP13.53□□□□□ -0.24
SRPRA-206ENST00000532259 SPINK14Q6IE38 97 aa13.53□□□□□ -0.24
SRPRA-206ENST00000532259 TMPPEQ6ZT21 453 aa13.53□□□□□ -0.24
SRPRA-206ENST00000532259 SUMF1Q8NBK3 374 aa13.53□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 130.3 ms