RNA–Protein interactions for RNA: ENST00000531727.5

CPSF1-207, Transcript of cleavage and polyadenylation specific factor 1, humanhuman

TSL 3 BASIC

Gene CPSF1, Length 704 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF1-207ENST00000531727 CAPN7Q9Y6W3 813 aa14.34□□□□□ -0.11
CPSF1-207ENST00000531727 TRAV20A0A0B4J274 112 aa14.33□□□□□ -0.12
CPSF1-207ENST00000531727 C5orf49A4QMS7 147 aa14.33□□□□□ -0.12
CPSF1-207ENST00000531727 SLC22A2O15244 555 aa14.33□□□□□ -0.12
CPSF1-207ENST00000531727 TPD52L2O43399 206 aaKnown RBP14.33□□□□□ -0.12
CPSF1-207ENST00000531727 CST2P09228 141 aa14.33□□□□□ -0.12
CPSF1-207ENST00000531727 MAKP20794 623 aa14.33□□□□□ -0.12
CPSF1-207ENST00000531727 GDI2P50395 445 aaKnown RBP14.33□□□□□ -0.12
CPSF1-207ENST00000531727 ZNF81P51508 661 aa14.33□□□□□ -0.12
CPSF1-207ENST00000531727 CTXN1P60606 82 aa14.33□□□□□ -0.12
CPSF1-207ENST00000531727 ERVK-25P63136 954 aa14.33□□□□□ -0.12
CPSF1-207ENST00000531727 MVKQ03426 396 aa14.33□□□□□ -0.12
CPSF1-207ENST00000531727 ZNF718Q3SXZ3 478 aa14.33□□□□□ -0.12
CPSF1-207ENST00000531727 FAM205BPQ63HN1 556 aa14.33□□□□□ -0.12
CPSF1-207ENST00000531727 UNQ6126/PRO20091Q6UXV3 157 aa14.33□□□□□ -0.12
CPSF1-207ENST00000531727 FOXL2NBQ6ZUU3 175 aa14.33□□□□□ -0.12
CPSF1-207ENST00000531727 USP51Q70EK9 711 aa14.33□□□□□ -0.12
CPSF1-207ENST00000531727 IGFN1Q86VF2 1251 aa14.33□□□□□ -0.12
CPSF1-207ENST00000531727 OFCC1Q8IZS5 231 aa14.33□□□□□ -0.12
CPSF1-207ENST00000531727 CLDN22Q8N7P3 220 aa14.33□□□□□ -0.12
CPSF1-207ENST00000531727 LRRC75AQ8NAA5 344 aa14.33□□□□□ -0.12
CPSF1-207ENST00000531727 RCN3Q96D15 328 aa14.33□□□□□ -0.12
CPSF1-207ENST00000531727 MARS2Q96GW9 593 aaKnown RBP14.33□□□□□ -0.12
CPSF1-207ENST00000531727 WNT5BQ9H1J7 359 aa14.33□□□□□ -0.12
CPSF1-207ENST00000531727 METTL17Q9H7H0 456 aaPredicted RBP14.33□□□□□ -0.12
CPSF1-207ENST00000531727 ZNF665Q9H7R5 613 aa14.33□□□□□ -0.12
CPSF1-207ENST00000531727 SAP30LQ9HAJ7 183 aa14.33□□□□□ -0.12
CPSF1-207ENST00000531727 MAN2C1Q9NTJ4 1040 aa14.33□□□□□ -0.12
CPSF1-207ENST00000531727 DECR2Q9NUI1 292 aa14.33□□□□□ -0.12
CPSF1-207ENST00000531727 CMTM6Q9NX76 183 aa14.33□□□□□ -0.12
CPSF1-207ENST00000531727 AP3M1Q9Y2T2 418 aa14.33□□□□□ -0.12
CPSF1-207ENST00000531727 ICMTO60725 284 aa14.32□□□□□ -0.12
CPSF1-207ENST00000531727 IFNW1P05000 195 aa14.32□□□□□ -0.12
CPSF1-207ENST00000531727 ANPEPP15144 967 aa14.32□□□□□ -0.12
CPSF1-207ENST00000531727 FUT4P22083 530 aa14.32□□□□□ -0.12
CPSF1-207ENST00000531727 LAP3P28838 519 aa14.32□□□□□ -0.12
CPSF1-207ENST00000531727 GCH1P30793 250 aa14.32□□□□□ -0.12
CPSF1-207ENST00000531727 MPV17P39210 176 aa14.32□□□□□ -0.12
CPSF1-207ENST00000531727 YAP1P46937 504 aaKnown RBP14.32□□□□□ -0.12
CPSF1-207ENST00000531727 PRKCDQ05655 676 aa14.32□□□□□ -0.12
CPSF1-207ENST00000531727 FHL1Q13642 323 aa14.32□□□□□ -0.12
CPSF1-207ENST00000531727 TRAM2Q15035 370 aa14.32□□□□□ -0.12
CPSF1-207ENST00000531727 TSTQ16762 297 aaKnown RBP14.32□□□□□ -0.12
CPSF1-207ENST00000531727 ANKDD1AQ495B1 522 aa14.32□□□□□ -0.12
CPSF1-207ENST00000531727 FAM209AQ5JX71 171 aa14.32□□□□□ -0.12
CPSF1-207ENST00000531727 SPATA46Q5T0L3 261 aa14.32□□□□□ -0.12
CPSF1-207ENST00000531727 AVPI1Q5T686 147 aa14.32□□□□□ -0.12
CPSF1-207ENST00000531727 MBNL2Q5VZF2 373 aaKnown RBP14.32□□□□□ -0.12
CPSF1-207ENST00000531727 ARPINQ7Z6K5 226 aa14.32□□□□□ -0.12
CPSF1-207ENST00000531727 VTCN1Q7Z7D3 282 aa14.32□□□□□ -0.12
CPSF1-207ENST00000531727 NRMQ8IXM6 262 aa14.32□□□□□ -0.12
CPSF1-207ENST00000531727 C1orf174Q8IYL3 243 aa14.32□□□□□ -0.12
CPSF1-207ENST00000531727 ALDH16A1Q8IZ83 802 aa14.32□□□□□ -0.12
CPSF1-207ENST00000531727 IPCEF1Q8WWN9 437 aaPredicted RBP14.32□□□□□ -0.12
CPSF1-207ENST00000531727 FNDC11Q9BVV2 318 aa14.32□□□□□ -0.12
CPSF1-207ENST00000531727 OR2H1Q9GZK4 316 aa14.32□□□□□ -0.12
CPSF1-207ENST00000531727 RHCGQ9UBD6 479 aa14.32□□□□□ -0.12
CPSF1-207ENST00000531727 SNX13Q9Y5W8 968 aa14.32□□□□□ -0.12
CPSF1-207ENST00000531727 TRAV27A0A087WT01 109 aa14.31□□□□□ -0.12
CPSF1-207ENST00000531727 A0A0A6YYJ9 748 aa14.31□□□□□ -0.12
CPSF1-207ENST00000531727 A6NIZ1 184 aa14.31□□□□□ -0.12
CPSF1-207ENST00000531727 CLDN25C9JDP6 229 aa14.31□□□□□ -0.12
CPSF1-207ENST00000531727 J3KTA2 159 aa14.31□□□□□ -0.12
CPSF1-207ENST00000531727 HAX1O00165 279 aa14.31□□□□□ -0.12
CPSF1-207ENST00000531727 FFAR1O14842 300 aa14.31□□□□□ -0.12
CPSF1-207ENST00000531727 GUCA1AP43080 201 aaPredicted RBP14.31□□□□□ -0.12
CPSF1-207ENST00000531727 SLC9A3P48764 834 aa14.31□□□□□ -0.12
CPSF1-207ENST00000531727 MMP15P51511 669 aa14.31□□□□□ -0.12
CPSF1-207ENST00000531727 RAP1BP61224 184 aa14.31□□□□□ -0.12
CPSF1-207ENST00000531727 PCBD1P61457 104 aa14.31□□□□□ -0.12
CPSF1-207ENST00000531727 RAP1AP62834 184 aa14.31□□□□□ -0.12
CPSF1-207ENST00000531727 SCGB2A2Q13296 93 aa14.31□□□□□ -0.12
CPSF1-207ENST00000531727 HFEQ30201 348 aa14.31□□□□□ -0.12
CPSF1-207ENST00000531727 TMEM255AQ5JRV8 349 aa14.31□□□□□ -0.12
CPSF1-207ENST00000531727 ACSM5Q6NUN0 579 aa14.31□□□□□ -0.12
CPSF1-207ENST00000531727 SHQ1Q6PI26 577 aaKnown RBP14.31□□□□□ -0.12
CPSF1-207ENST00000531727 RFPL4BQ6ZWI9 263 aa14.31□□□□□ -0.12
CPSF1-207ENST00000531727 OAFQ86UD1 273 aa14.31□□□□□ -0.12
CPSF1-207ENST00000531727 MEX3DQ86XN8 651 aaKnown RBP14.31□□□□□ -0.12
CPSF1-207ENST00000531727 POU5F2Q8N7G0 328 aa14.31□□□□□ -0.12
CPSF1-207ENST00000531727 OR51A7Q8NH64 312 aa14.31□□□□□ -0.12
CPSF1-207ENST00000531727 SLC25A40Q8TBP6 338 aa14.31□□□□□ -0.12
CPSF1-207ENST00000531727 KLF14Q8TD94 323 aaPredicted RBP14.31□□□□□ -0.12
CPSF1-207ENST00000531727 GEMIN6Q8WXD5 167 aaKnown RBP14.31□□□□□ -0.12
CPSF1-207ENST00000531727 ACOT11Q8WXI4 607 aaPredicted RBP14.31□□□□□ -0.12
CPSF1-207ENST00000531727 RAB39BQ96DA2 213 aa14.31□□□□□ -0.12
CPSF1-207ENST00000531727 ELMOD3Q96FG2 381 aa14.31□□□□□ -0.12
CPSF1-207ENST00000531727 OR2J1Q9GZK6 312 aa14.31□□□□□ -0.12
CPSF1-207ENST00000531727 OCEL1Q9H607 264 aa14.31□□□□□ -0.12
CPSF1-207ENST00000531727 ARMCX1Q9P291 453 aa14.31□□□□□ -0.12
CPSF1-207ENST00000531727 GMPR2Q9P2T1 348 aaKnown RBP14.31□□□□□ -0.12
CPSF1-207ENST00000531727 WIPI2Q9Y4P8 454 aa14.31□□□□□ -0.12
CPSF1-207ENST00000531727 TIMM10BQ9Y5J6 103 aa14.31□□□□□ -0.12
CPSF1-207ENST00000531727 CACNG2Q9Y698 323 aa14.31□□□□□ -0.12
CPSF1-207ENST00000531727 A0A1W2PPL8 197 aa14.3□□□□□ -0.12
CPSF1-207ENST00000531727 PLSCR5A0PG75 271 aa14.3□□□□□ -0.12
CPSF1-207ENST00000531727 EFCAB9A8MZ26 197 aa14.3□□□□□ -0.12
CPSF1-207ENST00000531727 H3BSA7 217 aa14.3□□□□□ -0.12
CPSF1-207ENST00000531727 SPRY3O43610 288 aa14.3□□□□□ -0.12
CPSF1-207ENST00000531727 DEAF1O75398 565 aaPredicted RBP14.3□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 35.7 ms