RNA–Protein interactions for RNA: ENST00000531042.5

CPSF1-205, Transcript of cleavage and polyadenylation specific factor 1, humanhuman

TSL 5

Gene CPSF1, Length 580 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF1-205ENST00000531042 RBP7Q96R05 134 aa13.45□□□□□ -0.26
CPSF1-205ENST00000531042 DECR2Q9NUI1 292 aa13.45□□□□□ -0.26
CPSF1-205ENST00000531042 EIF3KQ9UBQ5 218 aaKnown RBP13.45□□□□□ -0.26
CPSF1-205ENST00000531042 GRIP1Q9Y3R0 1128 aa13.45□□□□□ -0.26
CPSF1-205ENST00000531042 C5orf49A4QMS7 147 aa13.44□□□□□ -0.26
CPSF1-205ENST00000531042 MAKP20794 623 aa13.44□□□□□ -0.26
CPSF1-205ENST00000531042 YAP1P46937 504 aaKnown RBP13.44□□□□□ -0.26
CPSF1-205ENST00000531042 GDI2P50395 445 aaKnown RBP13.44□□□□□ -0.26
CPSF1-205ENST00000531042 CTXN1P60606 82 aa13.44□□□□□ -0.26
CPSF1-205ENST00000531042 MVKQ03426 396 aa13.44□□□□□ -0.26
CPSF1-205ENST00000531042 GLO1Q04760 184 aa13.44□□□□□ -0.26
CPSF1-205ENST00000531042 FHL1Q13642 323 aa13.44□□□□□ -0.26
CPSF1-205ENST00000531042 TSTQ16762 297 aaKnown RBP13.44□□□□□ -0.26
CPSF1-205ENST00000531042 ZNF718Q3SXZ3 478 aa13.44□□□□□ -0.26
CPSF1-205ENST00000531042 SPATA46Q5T0L3 261 aa13.44□□□□□ -0.26
CPSF1-205ENST00000531042 IGFN1Q86VF2 1251 aa13.44□□□□□ -0.26
CPSF1-205ENST00000531042 NRMQ8IXM6 262 aa13.44□□□□□ -0.26
CPSF1-205ENST00000531042 CLDN22Q8N7P3 220 aa13.44□□□□□ -0.26
CPSF1-205ENST00000531042 LZICQ8WZA0 190 aa13.44□□□□□ -0.26
CPSF1-205ENST00000531042 MARS2Q96GW9 593 aaKnown RBP13.44□□□□□ -0.26
CPSF1-205ENST00000531042 OR2H1Q9GZK4 316 aa13.44□□□□□ -0.26
CPSF1-205ENST00000531042 WNT5BQ9H1J7 359 aa13.44□□□□□ -0.26
CPSF1-205ENST00000531042 METTL17Q9H7H0 456 aaPredicted RBP13.44□□□□□ -0.26
CPSF1-205ENST00000531042 MAN2C1Q9NTJ4 1040 aa13.44□□□□□ -0.26
CPSF1-205ENST00000531042 CMTM6Q9NX76 183 aa13.44□□□□□ -0.26
CPSF1-205ENST00000531042 SNX13Q9Y5W8 968 aa13.44□□□□□ -0.26
CPSF1-205ENST00000531042 CAPN7Q9Y6W3 813 aa13.44□□□□□ -0.26
CPSF1-205ENST00000531042 TRAV20A0A0B4J274 112 aa13.43□□□□□ -0.26
CPSF1-205ENST00000531042 J3KTA2 159 aa13.43□□□□□ -0.26
CPSF1-205ENST00000531042 SLC22A2O15244 555 aa13.43□□□□□ -0.26
CPSF1-205ENST00000531042 TPD52L2O43399 206 aaKnown RBP13.43□□□□□ -0.26
CPSF1-205ENST00000531042 CST2P09228 141 aa13.43□□□□□ -0.26
CPSF1-205ENST00000531042 ANPEPP15144 967 aa13.43□□□□□ -0.26
CPSF1-205ENST00000531042 LAP3P28838 519 aa13.43□□□□□ -0.26
CPSF1-205ENST00000531042 GCH1P30793 250 aa13.43□□□□□ -0.26
CPSF1-205ENST00000531042 MPV17P39210 176 aa13.43□□□□□ -0.26
CPSF1-205ENST00000531042 ZNF81P51508 661 aa13.43□□□□□ -0.26
CPSF1-205ENST00000531042 MMP15P51511 669 aa13.43□□□□□ -0.26
CPSF1-205ENST00000531042 PRKCDQ05655 676 aa13.43□□□□□ -0.26
CPSF1-205ENST00000531042 TRAM2Q15035 370 aa13.43□□□□□ -0.26
CPSF1-205ENST00000531042 ANKDD1AQ495B1 522 aa13.43□□□□□ -0.26
CPSF1-205ENST00000531042 TMEM255AQ5JRV8 349 aa13.43□□□□□ -0.26
CPSF1-205ENST00000531042 AVPI1Q5T686 147 aa13.43□□□□□ -0.26
CPSF1-205ENST00000531042 FAM205BPQ63HN1 556 aa13.43□□□□□ -0.26
CPSF1-205ENST00000531042 UNQ6126/PRO20091Q6UXV3 157 aa13.43□□□□□ -0.26
CPSF1-205ENST00000531042 FOXL2NBQ6ZUU3 175 aa13.43□□□□□ -0.26
CPSF1-205ENST00000531042 USP51Q70EK9 711 aa13.43□□□□□ -0.26
CPSF1-205ENST00000531042 VTCN1Q7Z7D3 282 aa13.43□□□□□ -0.26
CPSF1-205ENST00000531042 MEX3DQ86XN8 651 aaKnown RBP13.43□□□□□ -0.26
CPSF1-205ENST00000531042 C1orf174Q8IYL3 243 aa13.43□□□□□ -0.26
CPSF1-205ENST00000531042 OFCC1Q8IZS5 231 aa13.43□□□□□ -0.26
CPSF1-205ENST00000531042 POU5F2Q8N7G0 328 aa13.43□□□□□ -0.26
CPSF1-205ENST00000531042 OR51A7Q8NH64 312 aa13.43□□□□□ -0.26
CPSF1-205ENST00000531042 SLC25A40Q8TBP6 338 aa13.43□□□□□ -0.26
CPSF1-205ENST00000531042 IPCEF1Q8WWN9 437 aaPredicted RBP13.43□□□□□ -0.26
CPSF1-205ENST00000531042 RCN3Q96D15 328 aa13.43□□□□□ -0.26
CPSF1-205ENST00000531042 FNDC11Q9BVV2 318 aa13.43□□□□□ -0.26
CPSF1-205ENST00000531042 ZNF665Q9H7R5 613 aa13.43□□□□□ -0.26
CPSF1-205ENST00000531042 SAP30LQ9HAJ7 183 aa13.43□□□□□ -0.26
CPSF1-205ENST00000531042 GMPR2Q9P2T1 348 aaKnown RBP13.43□□□□□ -0.26
CPSF1-205ENST00000531042 RHCGQ9UBD6 479 aa13.43□□□□□ -0.26
CPSF1-205ENST00000531042 AP3M1Q9Y2T2 418 aa13.43□□□□□ -0.26
CPSF1-205ENST00000531042 TRAV27A0A087WT01 109 aa13.42□□□□□ -0.26
CPSF1-205ENST00000531042 A6NIZ1 184 aa13.42□□□□□ -0.26
CPSF1-205ENST00000531042 CLDN25C9JDP6 229 aa13.42□□□□□ -0.26
CPSF1-205ENST00000531042 FFAR1O14842 300 aa13.42□□□□□ -0.26
CPSF1-205ENST00000531042 ICMTO60725 284 aa13.42□□□□□ -0.26
CPSF1-205ENST00000531042 IGHV1-46P01743 117 aa13.42□□□□□ -0.26
CPSF1-205ENST00000531042 IFNW1P05000 195 aa13.42□□□□□ -0.26
CPSF1-205ENST00000531042 GUCA1AP43080 201 aaPredicted RBP13.42□□□□□ -0.26
CPSF1-205ENST00000531042 RAP1BP61224 184 aa13.42□□□□□ -0.26
CPSF1-205ENST00000531042 RAP1AP62834 184 aa13.42□□□□□ -0.26
CPSF1-205ENST00000531042 HFEQ30201 348 aa13.42□□□□□ -0.26
CPSF1-205ENST00000531042 FAM209AQ5JX71 171 aa13.42□□□□□ -0.26
CPSF1-205ENST00000531042 MBNL2Q5VZF2 373 aaKnown RBP13.42□□□□□ -0.26
CPSF1-205ENST00000531042 ACSM5Q6NUN0 579 aa13.42□□□□□ -0.26
CPSF1-205ENST00000531042 ARPINQ7Z6K5 226 aa13.42□□□□□ -0.26
CPSF1-205ENST00000531042 OAFQ86UD1 273 aa13.42□□□□□ -0.26
CPSF1-205ENST00000531042 SLC15A3Q8IY34 581 aa13.42□□□□□ -0.26
CPSF1-205ENST00000531042 ALDH16A1Q8IZ83 802 aa13.42□□□□□ -0.26
CPSF1-205ENST00000531042 RNF113BQ8IZP6 322 aaKnown RBP13.42□□□□□ -0.26
CPSF1-205ENST00000531042 KLF14Q8TD94 323 aaPredicted RBP13.42□□□□□ -0.26
CPSF1-205ENST00000531042 OR2J1Q9GZK6 312 aa13.42□□□□□ -0.26
CPSF1-205ENST00000531042 OCEL1Q9H607 264 aa13.42□□□□□ -0.26
CPSF1-205ENST00000531042 G6PC2Q9NQR9 355 aa13.42□□□□□ -0.26
CPSF1-205ENST00000531042 ARMCX1Q9P291 453 aa13.42□□□□□ -0.26
CPSF1-205ENST00000531042 WIPI2Q9Y4P8 454 aa13.42□□□□□ -0.26
CPSF1-205ENST00000531042 TIMM10BQ9Y5J6 103 aa13.42□□□□□ -0.26
CPSF1-205ENST00000531042 CACNG2Q9Y698 323 aa13.42□□□□□ -0.26
CPSF1-205ENST00000531042 NBEAL1Q6ZS30 2694 aa13.41□□□□□ -0.26
CPSF1-205ENST00000531042 A0A0A6YYJ9 748 aa13.41□□□□□ -0.26
CPSF1-205ENST00000531042 A0A1W2PPL8 197 aa13.41□□□□□ -0.26
CPSF1-205ENST00000531042 PLSCR5A0PG75 271 aa13.41□□□□□ -0.26
CPSF1-205ENST00000531042 EFCAB9A8MZ26 197 aa13.41□□□□□ -0.26
CPSF1-205ENST00000531042 HAX1O00165 279 aa13.41□□□□□ -0.26
CPSF1-205ENST00000531042 SPRY3O43610 288 aa13.41□□□□□ -0.26
CPSF1-205ENST00000531042 DEAF1O75398 565 aaPredicted RBP13.41□□□□□ -0.26
CPSF1-205ENST00000531042 PNPP00491 289 aa13.41□□□□□ -0.26
CPSF1-205ENST00000531042 NGFP01138 241 aa13.41□□□□□ -0.26
CPSF1-205ENST00000531042 SLC9A3P48764 834 aa13.41□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 28.9 ms