RNA–Protein interactions for RNA: ENST00000530008.1

CAPRIN1-208, Transcript of cell cycle associated protein 1, human

TSL 4

Gene CAPRIN1, Length 580 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CAPRIN1-208	ENST00000530008	TMEM38A	Q9H6F2	299 aa		4.6	□□□□□ -1.67
CAPRIN1-208	ENST00000530008	YARS2	Q9Y2Z4	477 aa	Known RBP	4.6	□□□□□ -1.67
CAPRIN1-208	ENST00000530008	PHF3	Q92576	2039 aa	Known RBP	4.6	□□□□□ -1.67
CAPRIN1-208	ENST00000530008	TRAV6	A0A075B6T7	132 aa		4.59	□□□□□ -1.67
CAPRIN1-208	ENST00000530008	TRAV39	A0A0B4J263	110 aa		4.59	□□□□□ -1.67
CAPRIN1-208	ENST00000530008		A0A0G2JN53	185 aa		4.59	□□□□□ -1.67
CAPRIN1-208	ENST00000530008	SMKR1	H3BMG3	65 aa		4.59	□□□□□ -1.67
CAPRIN1-208	ENST00000530008	NUPL2	O15504	423 aa	Known RBP	4.59	□□□□□ -1.67
CAPRIN1-208	ENST00000530008	KDELR3	O43731	214 aa		4.59	□□□□□ -1.67
CAPRIN1-208	ENST00000530008	ICOSLG	O75144	302 aa		4.59	□□□□□ -1.67
CAPRIN1-208	ENST00000530008	HSBP1	O75506	76 aa		4.59	□□□□□ -1.67
CAPRIN1-208	ENST00000530008	UTS2	O95399	124 aa		4.59	□□□□□ -1.67
CAPRIN1-208	ENST00000530008	RBMX	P38159	391 aa	Known RBP	4.59	□□□□□ -1.67
CAPRIN1-208	ENST00000530008	CCNG1	P51959	295 aa		4.59	□□□□□ -1.67
CAPRIN1-208	ENST00000530008	TIMM10	P62072	90 aa		4.59	□□□□□ -1.67
CAPRIN1-208	ENST00000530008	REG3A	Q06141	175 aa		4.59	□□□□□ -1.67
CAPRIN1-208	ENST00000530008	ZNF33A	Q06730	810 aa		4.59	□□□□□ -1.67
CAPRIN1-208	ENST00000530008	CDH17	Q12864	832 aa		4.59	□□□□□ -1.67
CAPRIN1-208	ENST00000530008	OR7A5	Q15622	319 aa		4.59	□□□□□ -1.67
CAPRIN1-208	ENST00000530008	STK11	Q15831	433 aa		4.59	□□□□□ -1.67
CAPRIN1-208	ENST00000530008	RPEL1	Q2QD12	228 aa		4.59	□□□□□ -1.67
CAPRIN1-208	ENST00000530008	PAGE3	Q5JUK9	113 aa		4.59	□□□□□ -1.67
CAPRIN1-208	ENST00000530008	ZNF774	Q6NX45	483 aa		4.59	□□□□□ -1.67
CAPRIN1-208	ENST00000530008	C16orf87	Q6PH81	154 aa		4.59	□□□□□ -1.67
CAPRIN1-208	ENST00000530008	FAM58A	Q8N1B3	248 aa		4.59	□□□□□ -1.67
CAPRIN1-208	ENST00000530008	ASCC1	Q8N9N2	400 aa	Known RBP	4.59	□□□□□ -1.67
CAPRIN1-208	ENST00000530008	SPERT	Q8NA61	448 aa		4.59	□□□□□ -1.67
CAPRIN1-208	ENST00000530008	FBXO36	Q8NEA4	188 aa		4.59	□□□□□ -1.67
CAPRIN1-208	ENST00000530008	OR51L1	Q8NGJ5	315 aa		4.59	□□□□□ -1.67
CAPRIN1-208	ENST00000530008	OR10G9	Q8NGN4	311 aa		4.59	□□□□□ -1.67
CAPRIN1-208	ENST00000530008	OR2A1	Q8NGT9	310 aa		4.59	□□□□□ -1.67
CAPRIN1-208	ENST00000530008	GEMIN6	Q8WXD5	167 aa	Known RBP	4.59	□□□□□ -1.67
CAPRIN1-208	ENST00000530008	APH1A	Q96BI3	265 aa		4.59	□□□□□ -1.67
CAPRIN1-208	ENST00000530008	TMEM101	Q96IK0	257 aa		4.59	□□□□□ -1.67
CAPRIN1-208	ENST00000530008	B3GALT6	Q96L58	329 aa		4.59	□□□□□ -1.67
CAPRIN1-208	ENST00000530008	NRIP2	Q9BQI9	281 aa		4.59	□□□□□ -1.67
CAPRIN1-208	ENST00000530008	GAL3ST2	Q9H3Q3	398 aa		4.59	□□□□□ -1.67
CAPRIN1-208	ENST00000530008	CTPS2	Q9NRF8	586 aa		4.59	□□□□□ -1.67
CAPRIN1-208	ENST00000530008	SLC7A10	Q9NS82	523 aa		4.59	□□□□□ -1.67
CAPRIN1-208	ENST00000530008	CLN6	Q9NWW5	311 aa		4.59	□□□□□ -1.67
CAPRIN1-208	ENST00000530008	DDX19B	Q9UMR2	479 aa		4.59	□□□□□ -1.67
CAPRIN1-208	ENST00000530008	PLEKHG1	Q9ULL1	1385 aa		4.58	□□□□□ -1.68
CAPRIN1-208	ENST00000530008	TSPAN11	A1L157	253 aa		4.58	□□□□□ -1.68
CAPRIN1-208	ENST00000530008	HIDE1	A8MVS5	230 aa		4.58	□□□□□ -1.68
CAPRIN1-208	ENST00000530008		H0YHG0	523 aa		4.58	□□□□□ -1.68
CAPRIN1-208	ENST00000530008	NVL	O15381	856 aa	Known RBP	4.58	□□□□□ -1.68
CAPRIN1-208	ENST00000530008	FAM189A1	O60320	539 aa		4.58	□□□□□ -1.68
CAPRIN1-208	ENST00000530008	TNFSF13	O75888	250 aa		4.58	□□□□□ -1.68
CAPRIN1-208	ENST00000530008	SRP72	O76094	671 aa	Known RBP	4.58	□□□□□ -1.68
CAPRIN1-208	ENST00000530008	PAH	P00439	452 aa		4.58	□□□□□ -1.68
CAPRIN1-208	ENST00000530008	GIP	P09681	153 aa	Predicted RBP	4.58	□□□□□ -1.68
CAPRIN1-208	ENST00000530008	UBTFL6	P0CB48	400 aa	Predicted RBP	4.58	□□□□□ -1.68
CAPRIN1-208	ENST00000530008	PMCH	P20382	165 aa		4.58	□□□□□ -1.68
CAPRIN1-208	ENST00000530008	GABRR2	P28476	465 aa		4.58	□□□□□ -1.68
CAPRIN1-208	ENST00000530008	CFHR2	P36980	270 aa		4.58	□□□□□ -1.68
CAPRIN1-208	ENST00000530008	RFC3	P40938	356 aa		4.58	□□□□□ -1.68
CAPRIN1-208	ENST00000530008	MXD1	Q05195	221 aa		4.58	□□□□□ -1.68
CAPRIN1-208	ENST00000530008	ZBED5	Q49AG3	693 aa		4.58	□□□□□ -1.68
CAPRIN1-208	ENST00000530008	CCNJ	Q5T5M9	372 aa		4.58	□□□□□ -1.68
CAPRIN1-208	ENST00000530008	SPECC1L	Q69YQ0	1117 aa		4.58	□□□□□ -1.68
CAPRIN1-208	ENST00000530008	TMEM179	Q6ZVK1	233 aa		4.58	□□□□□ -1.68
CAPRIN1-208	ENST00000530008	TGIF2LY	Q8IUE0	185 aa		4.58	□□□□□ -1.68
CAPRIN1-208	ENST00000530008	ZBED8	Q8IZ13	594 aa		4.58	□□□□□ -1.68
CAPRIN1-208	ENST00000530008	TRAM1L1	Q8N609	369 aa		4.58	□□□□□ -1.68
CAPRIN1-208	ENST00000530008	LKAAEAR1	Q8TD35	194 aa		4.58	□□□□□ -1.68
CAPRIN1-208	ENST00000530008	CIDEC	Q96AQ7	238 aa	Predicted RBP	4.58	□□□□□ -1.68
CAPRIN1-208	ENST00000530008	RASL11B	Q9BPW5	248 aa		4.58	□□□□□ -1.68
CAPRIN1-208	ENST00000530008	GABARAPL3	Q9BY60	117 aa		4.58	□□□□□ -1.68
CAPRIN1-208	ENST00000530008	EML4	Q9HC35	981 aa	Known RBP	4.58	□□□□□ -1.68
CAPRIN1-208	ENST00000530008	AGPAT3	Q9NRZ7	376 aa		4.58	□□□□□ -1.68
CAPRIN1-208	ENST00000530008	CFAP45	Q9UL16	551 aa		4.58	□□□□□ -1.68
CAPRIN1-208	ENST00000530008	ST3GAL6	Q9Y274	331 aa		4.58	□□□□□ -1.68
CAPRIN1-208	ENST00000530008	KPTN	Q9Y664	436 aa		4.58	□□□□□ -1.68
CAPRIN1-208	ENST00000530008		E7ENQ6	273 aa		4.57	□□□□□ -1.68
CAPRIN1-208	ENST00000530008		H3BNH8	94 aa		4.57	□□□□□ -1.68
CAPRIN1-208	ENST00000530008	AQP8	O94778	261 aa		4.57	□□□□□ -1.68
CAPRIN1-208	ENST00000530008	ARG1	P05089	322 aa		4.57	□□□□□ -1.68
CAPRIN1-208	ENST00000530008	DCN	P07585	359 aa	Known RBP	4.57	□□□□□ -1.68
CAPRIN1-208	ENST00000530008	IGHV3-43D	P0DP04	118 aa		4.57	□□□□□ -1.68
CAPRIN1-208	ENST00000530008	TDGF1	P13385	188 aa		4.57	□□□□□ -1.68
CAPRIN1-208	ENST00000530008	HRH1	P35367	487 aa		4.57	□□□□□ -1.68
CAPRIN1-208	ENST00000530008	TDGF1P3	P51864	188 aa		4.57	□□□□□ -1.68
CAPRIN1-208	ENST00000530008	SLC1A5	Q15758	541 aa		4.57	□□□□□ -1.68
CAPRIN1-208	ENST00000530008	GABRA6	Q16445	453 aa		4.57	□□□□□ -1.68
CAPRIN1-208	ENST00000530008	SGCA	Q16586	387 aa		4.57	□□□□□ -1.68
CAPRIN1-208	ENST00000530008	ZNF544	Q6NX49	715 aa		4.57	□□□□□ -1.68
CAPRIN1-208	ENST00000530008	C6orf89	Q6UWU4	347 aa		4.57	□□□□□ -1.68
CAPRIN1-208	ENST00000530008	MYPOP	Q86VE0	399 aa	Predicted RBP	4.57	□□□□□ -1.68
CAPRIN1-208	ENST00000530008	ZNF547	Q8IVP9	402 aa		4.57	□□□□□ -1.68
CAPRIN1-208	ENST00000530008	OR13C9	Q8NGT0	318 aa		4.57	□□□□□ -1.68
CAPRIN1-208	ENST00000530008	ISOC2	Q96AB3	205 aa		4.57	□□□□□ -1.68
CAPRIN1-208	ENST00000530008	MAGEB18	Q96M61	343 aa		4.57	□□□□□ -1.68
CAPRIN1-208	ENST00000530008	COL21A1	Q96P44	957 aa		4.57	□□□□□ -1.68
CAPRIN1-208	ENST00000530008	TMEM175	Q9BSA9	504 aa		4.57	□□□□□ -1.68
CAPRIN1-208	ENST00000530008	DEFB129	Q9H1M3	183 aa		4.57	□□□□□ -1.68
CAPRIN1-208	ENST00000530008	CLMP	Q9H6B4	373 aa		4.57	□□□□□ -1.68
CAPRIN1-208	ENST00000530008	TNFRSF19	Q9NS68	423 aa		4.57	□□□□□ -1.68
CAPRIN1-208	ENST00000530008	IFNK	Q9P0W0	207 aa		4.57	□□□□□ -1.68
CAPRIN1-208	ENST00000530008	COL22A1	Q8NFW1	1626 aa	Predicted RBP	4.57	□□□□□ -1.68
CAPRIN1-208	ENST00000530008	CEMIP	Q8WUJ3	1361 aa		4.56	□□□□□ -1.68

Retrieved 100 of 20,778 RNA–protein pairs in 29 ms