RNA–Protein interactions for RNA: ENST00000529856.5

CCDC90B-216, Transcript of coiled-coil domain containing 90B, humanhuman

TSL 3

Gene CCDC90B, Length 1,039 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC90B-216ENST00000529856 SYT4Q9H2B2 425 aa10.97□□□□□ -0.65
CCDC90B-216ENST00000529856 POLE4Q9NR33 117 aa10.97□□□□□ -0.65
CCDC90B-216ENST00000529856 CA10Q9NS85 328 aa10.97□□□□□ -0.65
CCDC90B-216ENST00000529856 DNAJB9Q9UBS3 223 aa10.97□□□□□ -0.65
CCDC90B-216ENST00000529856 CELSR1Q9NYQ6 3014 aa10.97□□□□□ -0.65
CCDC90B-216ENST00000529856 ITPR3Q14573 2671 aa10.96□□□□□ -0.65
CCDC90B-216ENST00000529856 ARRDC5A6NEK1 342 aa10.96□□□□□ -0.65
CCDC90B-216ENST00000529856 EBAG9O00559 213 aa10.96□□□□□ -0.65
CCDC90B-216ENST00000529856 BHLHE40O14503 412 aa10.96□□□□□ -0.65
CCDC90B-216ENST00000529856 PTHP01270 115 aa10.96□□□□□ -0.65
CCDC90B-216ENST00000529856 TP53P04637 393 aaPredicted RBP10.96□□□□□ -0.65
CCDC90B-216ENST00000529856 HIST1H1CP16403 213 aaKnown RBP10.96□□□□□ -0.65
CCDC90B-216ENST00000529856 ZNF32P17041 273 aa10.96□□□□□ -0.65
CCDC90B-216ENST00000529856 MSR1P21757 451 aa10.96□□□□□ -0.65
CCDC90B-216ENST00000529856 NOS3P29474 1203 aa10.96□□□□□ -0.65
CCDC90B-216ENST00000529856 THBS4P35443 961 aa10.96□□□□□ -0.65
CCDC90B-216ENST00000529856 SERPINF1P36955 418 aa10.96□□□□□ -0.65
CCDC90B-216ENST00000529856 CDKN1AP38936 164 aa10.96□□□□□ -0.65
CCDC90B-216ENST00000529856 PLP2Q04941 152 aa10.96□□□□□ -0.65
CCDC90B-216ENST00000529856 COX10Q12887 443 aa10.96□□□□□ -0.65
CCDC90B-216ENST00000529856 DAG1Q14118 895 aa10.96□□□□□ -0.65
CCDC90B-216ENST00000529856 ENDOGQ14249 297 aaKnown RBP10.96□□□□□ -0.65
CCDC90B-216ENST00000529856 ADIPOQQ15848 244 aa10.96□□□□□ -0.65
CCDC90B-216ENST00000529856 SWI5Q1ZZU3 235 aa10.96□□□□□ -0.65
CCDC90B-216ENST00000529856 MST1LQ2TV78 715 aa10.96□□□□□ -0.65
CCDC90B-216ENST00000529856 PABPC1L2AQ5JQF8 200 aa10.96□□□□□ -0.65
CCDC90B-216ENST00000529856 CLEC12AQ5QGZ9 265 aa10.96□□□□□ -0.65
CCDC90B-216ENST00000529856 C1orf146Q5VVC0 180 aa10.96□□□□□ -0.65
CCDC90B-216ENST00000529856 LEG1Q6P5S2 330 aa10.96□□□□□ -0.65
CCDC90B-216ENST00000529856 JAZF1Q86VZ6 243 aa10.96□□□□□ -0.65
CCDC90B-216ENST00000529856 CPEB3Q8NE35 698 aaKnown RBP10.96□□□□□ -0.65
CCDC90B-216ENST00000529856 SLC30A7Q8NEW0 376 aa10.96□□□□□ -0.65
CCDC90B-216ENST00000529856 WFDC11Q8NEX6 87 aa10.96□□□□□ -0.65
CCDC90B-216ENST00000529856 OR52L1Q8NGH7 329 aa10.96□□□□□ -0.65
CCDC90B-216ENST00000529856 OR8D4Q8NGM9 314 aa10.96□□□□□ -0.65
CCDC90B-216ENST00000529856 OR4K13Q8NH42 304 aa10.96□□□□□ -0.65
CCDC90B-216ENST00000529856 TRMT61AQ96FX7 289 aaKnown RBP10.96□□□□□ -0.65
CCDC90B-216ENST00000529856 NMNAT3Q96T66 252 aa10.96□□□□□ -0.65
CCDC90B-216ENST00000529856 NIPSNAP1Q9BPW8 284 aa10.96□□□□□ -0.65
CCDC90B-216ENST00000529856 WACQ9BTA9 647 aa10.96□□□□□ -0.65
CCDC90B-216ENST00000529856 PLA2G12AQ9BZM1 189 aa10.96□□□□□ -0.65
CCDC90B-216ENST00000529856 C1orf198Q9H425 327 aa10.96□□□□□ -0.65
CCDC90B-216ENST00000529856 ZNF442Q9H7R0 627 aa10.96□□□□□ -0.65
CCDC90B-216ENST00000529856 CCNB1IP1Q9NPC3 277 aa10.96□□□□□ -0.65
CCDC90B-216ENST00000529856 PDP1Q9P0J1 537 aaPredicted RBP10.96□□□□□ -0.65
CCDC90B-216ENST00000529856 COA3Q9Y2R0 106 aaPredicted RBP10.96□□□□□ -0.65
CCDC90B-216ENST00000529856 SPEF1Q9Y4P9 236 aa10.96□□□□□ -0.65
CCDC90B-216ENST00000529856 RTTNQ86VV8 2226 aa10.95□□□□□ -0.66
CCDC90B-216ENST00000529856 IQCMA0A1B0GVH7 501 aa10.95□□□□□ -0.66
CCDC90B-216ENST00000529856 C12orf71A8MTZ7 269 aa10.95□□□□□ -0.66
CCDC90B-216ENST00000529856 VSTM5A8MXK1 200 aa10.95□□□□□ -0.66
CCDC90B-216ENST00000529856 E2F6O75461 281 aa10.95□□□□□ -0.66
CCDC90B-216ENST00000529856 TIPRLO75663 272 aa10.95□□□□□ -0.66
CCDC90B-216ENST00000529856 RENP00797 406 aa10.95□□□□□ -0.66
CCDC90B-216ENST00000529856 IGFBP1P08833 259 aaPredicted RBP10.95□□□□□ -0.66
CCDC90B-216ENST00000529856 OR4A8P0C604 315 aa10.95□□□□□ -0.66
CCDC90B-216ENST00000529856 CRABP1P29762 137 aa10.95□□□□□ -0.66
CCDC90B-216ENST00000529856 ATP5J2P56134 94 aa10.95□□□□□ -0.66
CCDC90B-216ENST00000529856 PCBD1P61457 104 aa10.95□□□□□ -0.66
CCDC90B-216ENST00000529856 PSG4Q00888 419 aa10.95□□□□□ -0.66
CCDC90B-216ENST00000529856 HSF2Q03933 536 aa10.95□□□□□ -0.66
CCDC90B-216ENST00000529856 CCNIQ14094 377 aa10.95□□□□□ -0.66
CCDC90B-216ENST00000529856 Q5PR19 223 aa10.95□□□□□ -0.66
CCDC90B-216ENST00000529856 SLC35F1Q5T1Q4 408 aa10.95□□□□□ -0.66
CCDC90B-216ENST00000529856 KRT80Q6KB66 452 aa10.95□□□□□ -0.66
CCDC90B-216ENST00000529856 VHLLQ6RSH7 139 aa10.95□□□□□ -0.66
CCDC90B-216ENST00000529856 UGT2A3Q6UWM9 527 aa10.95□□□□□ -0.66
CCDC90B-216ENST00000529856 YTHDF3Q7Z739 585 aaKnown RBP10.95□□□□□ -0.66
CCDC90B-216ENST00000529856 SYT9Q86SS6 491 aa10.95□□□□□ -0.66
CCDC90B-216ENST00000529856 GLB1L2Q8IW92 636 aa10.95□□□□□ -0.66
CCDC90B-216ENST00000529856 OR6V1Q8N148 313 aa10.95□□□□□ -0.66
CCDC90B-216ENST00000529856 LNX2Q8N448 690 aa10.95□□□□□ -0.66
CCDC90B-216ENST00000529856 OR52E2Q8NGJ4 325 aa10.95□□□□□ -0.66
CCDC90B-216ENST00000529856 OR1J2Q8NGS2 313 aa10.95□□□□□ -0.66
CCDC90B-216ENST00000529856 UTP4Q969X6 686 aaKnown RBP10.95□□□□□ -0.66
CCDC90B-216ENST00000529856 DUS3LQ96G46 650 aaKnown RBP10.95□□□□□ -0.66
CCDC90B-216ENST00000529856 FOXN4Q96NZ1 517 aa10.95□□□□□ -0.66
CCDC90B-216ENST00000529856 TSSK2Q96PF2 358 aa10.95□□□□□ -0.66
CCDC90B-216ENST00000529856 DDOQ99489 341 aa10.95□□□□□ -0.66
CCDC90B-216ENST00000529856 ZNF416Q9BWM5 594 aa10.95□□□□□ -0.66
CCDC90B-216ENST00000529856 TSSK6Q9BXA6 273 aa10.95□□□□□ -0.66
CCDC90B-216ENST00000529856 CACNG6Q9BXT2 260 aa10.95□□□□□ -0.66
CCDC90B-216ENST00000529856 RERGLQ9H628 205 aa10.95□□□□□ -0.66
CCDC90B-216ENST00000529856 NTN4Q9HB63 628 aa10.95□□□□□ -0.66
CCDC90B-216ENST00000529856 SRA1Q9HD15 236 aaKnown RBP10.95□□□□□ -0.66
CCDC90B-216ENST00000529856 EMC7Q9NPA0 242 aa10.95□□□□□ -0.66
CCDC90B-216ENST00000529856 TBC1D23Q9NUY8 699 aa10.95□□□□□ -0.66
CCDC90B-216ENST00000529856 ARMC1Q9NVT9 282 aa10.95□□□□□ -0.66
CCDC90B-216ENST00000529856 B9D1Q9UPM9 204 aa10.95□□□□□ -0.66
CCDC90B-216ENST00000529856 TIMM10BQ9Y5J6 103 aa10.95□□□□□ -0.66
CCDC90B-216ENST00000529856 HIVEP1P15822 2718 aa10.94□□□□□ -0.66
CCDC90B-216ENST00000529856 IGLV1-36A0A0B4J1U3 117 aa10.94□□□□□ -0.66
CCDC90B-216ENST00000529856 OR6C68A6NDL8 312 aa10.94□□□□□ -0.66
CCDC90B-216ENST00000529856 DCTN6O00399 190 aa10.94□□□□□ -0.66
CCDC90B-216ENST00000529856 DEAF1O75398 565 aaPredicted RBP10.94□□□□□ -0.66
CCDC90B-216ENST00000529856 CIB2O75838 187 aa10.94□□□□□ -0.66
CCDC90B-216ENST00000529856 MPZL1O95297 269 aa10.94□□□□□ -0.66
CCDC90B-216ENST00000529856 SOX14O95416 240 aa10.94□□□□□ -0.66
CCDC90B-216ENST00000529856 BMP4P12644 408 aa10.94□□□□□ -0.66
CCDC90B-216ENST00000529856 PRKACGP22612 351 aa10.94□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 45.6 ms