RNA–Protein interactions for RNA: ENST00000529046.5

CSDE1-212, Transcript of cold shock domain containing E1, humanhuman

TSL 4

Gene CSDE1, Length 571 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSDE1-212ENST00000529046 RPF2Q9H7B2 306 aaKnown RBP3.88□□□□□ -1.79
CSDE1-212ENST00000529046 CALHM2Q9HA72 323 aa3.88□□□□□ -1.79
CSDE1-212ENST00000529046 PROK2Q9HC23 129 aa3.88□□□□□ -1.79
CSDE1-212ENST00000529046 LYARQ9NX58 379 aaKnown RBP3.88□□□□□ -1.79
CSDE1-212ENST00000529046 NUDT4Q9NZJ9 180 aa3.88□□□□□ -1.79
CSDE1-212ENST00000529046 CD274Q9NZQ7 290 aa3.88□□□□□ -1.79
CSDE1-212ENST00000529046 TBK1Q9UHD2 729 aa3.88□□□□□ -1.79
CSDE1-212ENST00000529046 MRPS18CQ9Y3D5 142 aaKnown RBP3.88□□□□□ -1.79
CSDE1-212ENST00000529046 ASB4Q9Y574 426 aa3.88□□□□□ -1.79
CSDE1-212ENST00000529046 SCN3AQ9NY46 2000 aa3.88□□□□□ -1.79
CSDE1-212ENST00000529046 CACNA1CQ13936 2221 aa3.87□□□□□ -1.79
CSDE1-212ENST00000529046 NIPBLQ6KC79 2804 aaeCLIP3.87□□□□□ -1.79
CSDE1-212ENST00000529046 HCFC1P51610 2035 aa3.87□□□□□ -1.79
CSDE1-212ENST00000529046 PHF3Q92576 2039 aaKnown RBP3.87□□□□□ -1.79
CSDE1-212ENST00000529046 PCNX1Q96RV3 2341 aa3.87□□□□□ -1.79
CSDE1-212ENST00000529046 NOTCH3Q9UM47 2321 aa3.87□□□□□ -1.79
CSDE1-212ENST00000529046 LOC105371242A0A075B767 164 aa3.87□□□□□ -1.79
CSDE1-212ENST00000529046 A0A0A6YYD5 115 aa3.87□□□□□ -1.79
CSDE1-212ENST00000529046 IQANK1A0A1B0GTG1 560 aa3.87□□□□□ -1.79
CSDE1-212ENST00000529046 ATP6AP2A0A1C7CYW4 349 aa3.87□□□□□ -1.79
CSDE1-212ENST00000529046 NKX2-6A6NCS4 301 aa3.87□□□□□ -1.79
CSDE1-212ENST00000529046 SERINC4A6NH21 518 aa3.87□□□□□ -1.79
CSDE1-212ENST00000529046 NCF1BA6NI72 391 aaPredicted RBP3.87□□□□□ -1.79
CSDE1-212ENST00000529046 FAM166BA8MTA8 275 aa3.87□□□□□ -1.79
CSDE1-212ENST00000529046 NCF1CA8MVU1 366 aaPredicted RBP3.87□□□□□ -1.79
CSDE1-212ENST00000529046 G3V2L1 256 aa3.87□□□□□ -1.79
CSDE1-212ENST00000529046 H7C423 109 aa3.87□□□□□ -1.79
CSDE1-212ENST00000529046 PLPP1O14494 284 aa3.87□□□□□ -1.79
CSDE1-212ENST00000529046 TP53I11O14683 189 aa3.87□□□□□ -1.79
CSDE1-212ENST00000529046 ACOX3O15254 700 aa3.87□□□□□ -1.79
CSDE1-212ENST00000529046 ST8SIA3O43173 380 aa3.87□□□□□ -1.79
CSDE1-212ENST00000529046 KLHL2O95198 593 aa3.87□□□□□ -1.79
CSDE1-212ENST00000529046 ACTL6AO96019 429 aa3.87□□□□□ -1.79
CSDE1-212ENST00000529046 CLPSP04118 112 aa3.87□□□□□ -1.79
CSDE1-212ENST00000529046 RHOXF2BP0C7M4 288 aa3.87□□□□□ -1.79
CSDE1-212ENST00000529046 NCF1P14598 390 aaPredicted RBP3.87□□□□□ -1.79
CSDE1-212ENST00000529046 OPRM1P35372 400 aa3.87□□□□□ -1.79
CSDE1-212ENST00000529046 RFC3P40938 356 aa3.87□□□□□ -1.79
CSDE1-212ENST00000529046 SSR2P43308 183 aa3.87□□□□□ -1.79
CSDE1-212ENST00000529046 GPX6P59796 221 aa3.87□□□□□ -1.79
CSDE1-212ENST00000529046 KCNJ2P63252 427 aa3.87□□□□□ -1.79
CSDE1-212ENST00000529046 TNFRSF17Q02223 184 aa3.87□□□□□ -1.79
CSDE1-212ENST00000529046 C17orf67Q0P5P2 114 aa3.87□□□□□ -1.79
CSDE1-212ENST00000529046 ASPHQ12797 758 aa3.87□□□□□ -1.79
CSDE1-212ENST00000529046 SLAMF1Q13291 335 aa3.87□□□□□ -1.79
CSDE1-212ENST00000529046 FASTKD3Q14CZ7 662 aaKnown RBP3.87□□□□□ -1.79
CSDE1-212ENST00000529046 EBPQ15125 230 aaKnown RBP3.87□□□□□ -1.79
CSDE1-212ENST00000529046 OR4D1Q15615 310 aa3.87□□□□□ -1.79
CSDE1-212ENST00000529046 DUSP5Q16690 384 aa3.87□□□□□ -1.79
CSDE1-212ENST00000529046 FAM83EQ2M2I3 478 aa3.87□□□□□ -1.79
CSDE1-212ENST00000529046 SMU1Q2TAY7 513 aa3.87□□□□□ -1.79
CSDE1-212ENST00000529046 DHRS11Q6UWP2 260 aa3.87□□□□□ -1.79
CSDE1-212ENST00000529046 C16orf47Q6ZP98 133 aaPredicted RBP3.87□□□□□ -1.79
CSDE1-212ENST00000529046 C5orf24Q7Z6I8 188 aa3.87□□□□□ -1.79
CSDE1-212ENST00000529046 ANKRD46Q86W74 232 aa3.87□□□□□ -1.79
CSDE1-212ENST00000529046 ZNF321PQ8N8H1 164 aa3.87□□□□□ -1.79
CSDE1-212ENST00000529046 ZNF615Q8N8J6 731 aa3.87□□□□□ -1.79
CSDE1-212ENST00000529046 SNX31Q8N9S9 440 aa3.87□□□□□ -1.79
CSDE1-212ENST00000529046 OR7G1Q8NGA0 311 aa3.87□□□□□ -1.79
CSDE1-212ENST00000529046 OR4D10Q8NGI6 311 aa3.87□□□□□ -1.79
CSDE1-212ENST00000529046 OR4C15Q8NGM1 316 aa3.87□□□□□ -1.79
CSDE1-212ENST00000529046 SPPL2AQ8TCT8 520 aa3.87□□□□□ -1.79
CSDE1-212ENST00000529046 RNASE6Q93091 150 aaKnown RBP3.87□□□□□ -1.79
CSDE1-212ENST00000529046 DTNBP1Q96EV8 351 aa3.87□□□□□ -1.79
CSDE1-212ENST00000529046 NAPGQ99747 312 aaPredicted RBP3.87□□□□□ -1.79
CSDE1-212ENST00000529046 SHCBP1LQ9BZQ2 653 aa3.87□□□□□ -1.79
CSDE1-212ENST00000529046 ZNF350Q9GZX5 532 aa3.87□□□□□ -1.79
CSDE1-212ENST00000529046 OR51B5Q9H339 312 aa3.87□□□□□ -1.79
CSDE1-212ENST00000529046 LIN28AQ9H9Z2 209 aaKnown RBP3.87□□□□□ -1.79
CSDE1-212ENST00000529046 WDR41Q9HAD4 459 aa3.87□□□□□ -1.79
CSDE1-212ENST00000529046 CXorf21Q9HAI6 301 aa3.87□□□□□ -1.79
CSDE1-212ENST00000529046 GPR173Q9NS66 373 aa3.87□□□□□ -1.79
CSDE1-212ENST00000529046 NDE1Q9NXR1 346 aa3.87□□□□□ -1.79
CSDE1-212ENST00000529046 OPTCQ9UBM4 332 aa3.87□□□□□ -1.79
CSDE1-212ENST00000529046 MTRF1LQ9UGC7 380 aaKnown RBP3.87□□□□□ -1.79
CSDE1-212ENST00000529046 ZNF639Q9UID6 485 aa3.87□□□□□ -1.79
CSDE1-212ENST00000529046 TMCO1Q9UM00 188 aa3.87□□□□□ -1.79
CSDE1-212ENST00000529046 RABL2BQ9UNT1 228 aa3.87□□□□□ -1.79
CSDE1-212ENST00000529046 CFL2Q9Y281 166 aa3.87□□□□□ -1.79
CSDE1-212ENST00000529046 RPH3AQ9Y2J0 694 aaPredicted RBP3.87□□□□□ -1.79
CSDE1-212ENST00000529046 ZFHX3Q15911 3703 aa3.87□□□□□ -1.79
CSDE1-212ENST00000529046 CCDC168Q8NDH2 2452 aa3.86□□□□□ -1.79
CSDE1-212ENST00000529046 A0A0G2JMM0 328 aa3.86□□□□□ -1.79
CSDE1-212ENST00000529046 A0A0G2JN53 185 aa3.86□□□□□ -1.79
CSDE1-212ENST00000529046 C2orf92A0A1B0GVN3 265 aa3.86□□□□□ -1.79
CSDE1-212ENST00000529046 A0A1W2PPB8 328 aa3.86□□□□□ -1.79
CSDE1-212ENST00000529046 A0A1W2PRS3 328 aa3.86□□□□□ -1.79
CSDE1-212ENST00000529046 GOLGA6L10A6NI86 522 aa3.86□□□□□ -1.79
CSDE1-212ENST00000529046 KIR3DP1A8MWS1 328 aa3.86□□□□□ -1.79
CSDE1-212ENST00000529046 K7EQD1 137 aa3.86□□□□□ -1.79
CSDE1-212ENST00000529046 SLC1A7O00341 560 aa3.86□□□□□ -1.79
CSDE1-212ENST00000529046 SOCS3O14543 225 aa3.86□□□□□ -1.79
CSDE1-212ENST00000529046 SURF4O15260 269 aa3.86□□□□□ -1.79
CSDE1-212ENST00000529046 SCO2O43819 266 aa3.86□□□□□ -1.79
CSDE1-212ENST00000529046 CBR3O75828 277 aa3.86□□□□□ -1.79
CSDE1-212ENST00000529046 BCAS2O75934 225 aaPredicted RBP3.86□□□□□ -1.79
CSDE1-212ENST00000529046 NXPH4O95158 308 aa3.86□□□□□ -1.79
CSDE1-212ENST00000529046 RCBTB2O95199 551 aa3.86□□□□□ -1.79
CSDE1-212ENST00000529046 CRHP06850 196 aa3.86□□□□□ -1.79
CSDE1-212ENST00000529046 DRD5P21918 477 aa3.86□□□□□ -1.79
Retrieved 100 of 20,778 RNA–protein pairs in 110.2 ms